| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is 123968392
Identifier: 123968392
GI number: 123968392
Start: 743984
End: 745600
Strand: Reverse
Name: 123968392
Synonym: A9601_08591
Alternate gene names: NA
Gene position: 745600-743984 (Counterclockwise)
Preceding gene: 123968393
Following gene: 123968391
Centisome position: 44.65
GC content: 27.89
Gene sequence:
>1617_bases TTGGAATTAATTTCAAAAAAATCGATATTGATTATTGCTCCAAGCTTAATAGCAGAATCTTTATCGCTTAAGTTAACATC ACTAGACCAAAATTTAGACATTAATTTTAGTAATGGAAAAGGTAATAAAACTCCAGATTTAGTTATATGGAATGTTCTTA ATTTCCAATCAGAAGATCTTATAAGTTTAGAATTATTAAAATTAAGAGAAAGATATGATGAGTCAAAGTTTCTTATAATT CTTTCTGGCGAACTTGTTTATGAAGCAAATACCCCCACATCGTTAAATGCTGAAGGTTTTCTTTTAAATCCTAGTGCAGA AAAAGTTCTTGAATCTATTGAAACCATTTTAAATGGAGGAAGGGTATTTGATATTGAAAATAATTCCCGAGTTCAATTAA ACAAAAATAAGCCTCTCAGTTTTAGTCAAAAAATTCTAACTTCAGGTCTTAAACAAATAGATTCTGAAATTAACTATATA TTCAAATATGTCAACTCTGATTCAACACCAGAATTTTATAAATTCATTTTAAAAGGAAGATTAAGAGAACTTATTACTGC AAAATCTTTTCTAATTTTCTTATGGGGTAATTCACTAGAACTTTATACAGAGGCAGTTTACACTGAAAATAAAATAAATC TTGAAAATAAGAACACTGTTTTCATTAAAGATAAAAACACCGCAGAAATATGGAATTTGATTTTAGATAGACTAAAAGAA AGGTATAGCTCAACTAACTTACAGGTTGAATTTAATAATTCATCAATAATTCTCTCTGGAATAAAGAAAGAATTCATTTC GCGACTAATTTGCAAAATGTTAGATGAGTTAGATAATTTAGTCAAAAATATTAAGGAAAACTATAAGGAGAAAGATTTTA AAGATGATTTAAATTCTCTTATAAAAGAACTTAAAGTTAATACAATTTCAAATATCACAGACAGTTATTTTCGATTAAAA AAAGGTGGCGAATCTATTTCAATAAATGATTTTATTTATAGTGAGGTAAGTTGCGAAGAGATAGATAGAGAATCACACGA ATCAATAATGTTTATTGAGCCAATTATTAAAAATGAAGCTCTTGACTATGATGGAAAATTACTCCCTCTATATGAAACAG AATCGTTTTTGATCCTTGAAAATATTATTTCAAACTGGACAATAAGGAACTGTAATTTATTAGCTTCTGAAATCTTTAAT ATTTGTTCTTCTTGGCCTGAATTAAGAACTGTACTTATAAATCCCGAATTACAATCGACAAGAAATTTTGAAAGATTTAG AAATAATATTAATAACTACAATCGCTGGCATGACTATATTTATATGCCTATCTACTTGTATGAGAGTAAAAGAGAATATA TTGATATTATCGATAAAAAATTTACCCGTTACTTTAAAAATGAAAATAGAGAGAAAGAATTAGAGAATCTAGAATGGCTA CAAAAACAAGTTACATTGTTAGTTGAGATAAGAGATGCCGTAGCACCACAGTTAGAAGTTGCTGTAAAATATATCGGTAA TCTTTTCGTAACTTTCCTTACAAAGGTCGTTGGTAAAGCTATCGGTTTAGTGGGGAAAGGAATCCTTCAAGGATTAGGAA GATCAAGTTCAAAGTAA
Upstream 100 bases:
>100_bases AACACAAATTACTACGCTTAAAAGAGTATAAAAATTGATTTAAGGCTGGTGTTTGCAGTAATTGTTAGTTAATTTTGTAT AAGAGATAAGAAATCTAGTC
Downstream 100 bases:
>100_bases GTTATTAAACTTTAATGAAAATAATTCAATGGATCCTGATAGCATTAATTTTCTTAAGCCCATTTAAAGCAAATGCCTCT AGAGATACTGATAGTTACGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 538; Mature: 538
Protein sequence:
>538_residues MELISKKSILIIAPSLIAESLSLKLTSLDQNLDINFSNGKGNKTPDLVIWNVLNFQSEDLISLELLKLRERYDESKFLII LSGELVYEANTPTSLNAEGFLLNPSAEKVLESIETILNGGRVFDIENNSRVQLNKNKPLSFSQKILTSGLKQIDSEINYI FKYVNSDSTPEFYKFILKGRLRELITAKSFLIFLWGNSLELYTEAVYTENKINLENKNTVFIKDKNTAEIWNLILDRLKE RYSSTNLQVEFNNSSIILSGIKKEFISRLICKMLDELDNLVKNIKENYKEKDFKDDLNSLIKELKVNTISNITDSYFRLK KGGESISINDFIYSEVSCEEIDRESHESIMFIEPIIKNEALDYDGKLLPLYETESFLILENIISNWTIRNCNLLASEIFN ICSSWPELRTVLINPELQSTRNFERFRNNINNYNRWHDYIYMPIYLYESKREYIDIIDKKFTRYFKNENREKELENLEWL QKQVTLLVEIRDAVAPQLEVAVKYIGNLFVTFLTKVVGKAIGLVGKGILQGLGRSSSK
Sequences:
>Translated_538_residues MELISKKSILIIAPSLIAESLSLKLTSLDQNLDINFSNGKGNKTPDLVIWNVLNFQSEDLISLELLKLRERYDESKFLII LSGELVYEANTPTSLNAEGFLLNPSAEKVLESIETILNGGRVFDIENNSRVQLNKNKPLSFSQKILTSGLKQIDSEINYI FKYVNSDSTPEFYKFILKGRLRELITAKSFLIFLWGNSLELYTEAVYTENKINLENKNTVFIKDKNTAEIWNLILDRLKE RYSSTNLQVEFNNSSIILSGIKKEFISRLICKMLDELDNLVKNIKENYKEKDFKDDLNSLIKELKVNTISNITDSYFRLK KGGESISINDFIYSEVSCEEIDRESHESIMFIEPIIKNEALDYDGKLLPLYETESFLILENIISNWTIRNCNLLASEIFN ICSSWPELRTVLINPELQSTRNFERFRNNINNYNRWHDYIYMPIYLYESKREYIDIIDKKFTRYFKNENREKELENLEWL QKQVTLLVEIRDAVAPQLEVAVKYIGNLFVTFLTKVVGKAIGLVGKGILQGLGRSSSK >Mature_538_residues MELISKKSILIIAPSLIAESLSLKLTSLDQNLDINFSNGKGNKTPDLVIWNVLNFQSEDLISLELLKLRERYDESKFLII LSGELVYEANTPTSLNAEGFLLNPSAEKVLESIETILNGGRVFDIENNSRVQLNKNKPLSFSQKILTSGLKQIDSEINYI FKYVNSDSTPEFYKFILKGRLRELITAKSFLIFLWGNSLELYTEAVYTENKINLENKNTVFIKDKNTAEIWNLILDRLKE RYSSTNLQVEFNNSSIILSGIKKEFISRLICKMLDELDNLVKNIKENYKEKDFKDDLNSLIKELKVNTISNITDSYFRLK KGGESISINDFIYSEVSCEEIDRESHESIMFIEPIIKNEALDYDGKLLPLYETESFLILENIISNWTIRNCNLLASEIFN ICSSWPELRTVLINPELQSTRNFERFRNNINNYNRWHDYIYMPIYLYESKREYIDIIDKKFTRYFKNENREKELENLEWL QKQVTLLVEIRDAVAPQLEVAVKYIGNLFVTFLTKVVGKAIGLVGKGILQGLGRSSSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001789 - InterPro: IPR016837 - InterPro: IPR022552 [H]
Pfam domain/function: PF12452 DUF3685; PF00072 Response_reg [H]
EC number: NA
Molecular weight: Translated: 62394; Mature: 62394
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELISKKSILIIAPSLIAESLSLKLTSLDQNLDINFSNGKGNKTPDLVIWNVLNFQSEDL CCCCCCCCEEEEEHHHHHHHHHEEEEECCCCCEEEECCCCCCCCCCEEEEEEECCCCCCH ISLELLKLRERYDESKFLIILSGELVYEANTPTSLNAEGFLLNPSAEKVLESIETILNGG HHHHHHHHHHHCCCCCEEEEEECCEEEECCCCCCCCCCCEEECCCHHHHHHHHHHHHCCC RVFDIENNSRVQLNKNKPLSFSQKILTSGLKQIDSEINYIFKYVNSDSTPEFYKFILKGR EEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH LRELITAKSFLIFLWGNSLELYTEAVYTENKINLENKNTVFIKDKNTAEIWNLILDRLKE HHHHHHHHHEEEEEECCCHHHHHHHHEECCEEEECCCCEEEEECCCHHHHHHHHHHHHHH RYSSTNLQVEFNNSSIILSGIKKEFISRLICKMLDELDNLVKNIKENYKEKDFKDDLNSL HHCCCCEEEEECCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH IKELKVNTISNITDSYFRLKKGGESISINDFIYSEVSCEEIDRESHESIMFIEPIIKNEA HHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHCCCCCHHHHCCCCCCCEEEEEHHHCCCC LDYDGKLLPLYETESFLILENIISNWTIRNCNLLASEIFNICSSWPELRTVLINPELQST CCCCCCEEEEECCCCHHHHHHHHCCCEECCHHHHHHHHHHHHCCCHHHEEEEECCCHHHH RNFERFRNNINNYNRWHDYIYMPIYLYESKREYIDIIDKKFTRYFKNENREKELENLEWL HHHHHHHHCCCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH QKQVTLLVEIRDAVAPQLEVAVKYIGNLFVTFLTKVVGKAIGLVGKGILQGLGRSSSK HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MELISKKSILIIAPSLIAESLSLKLTSLDQNLDINFSNGKGNKTPDLVIWNVLNFQSEDL CCCCCCCCEEEEEHHHHHHHHHEEEEECCCCCEEEECCCCCCCCCCEEEEEEECCCCCCH ISLELLKLRERYDESKFLIILSGELVYEANTPTSLNAEGFLLNPSAEKVLESIETILNGG HHHHHHHHHHHCCCCCEEEEEECCEEEECCCCCCCCCCCEEECCCHHHHHHHHHHHHCCC RVFDIENNSRVQLNKNKPLSFSQKILTSGLKQIDSEINYIFKYVNSDSTPEFYKFILKGR EEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH LRELITAKSFLIFLWGNSLELYTEAVYTENKINLENKNTVFIKDKNTAEIWNLILDRLKE HHHHHHHHHEEEEEECCCHHHHHHHHEECCEEEECCCCEEEEECCCHHHHHHHHHHHHHH RYSSTNLQVEFNNSSIILSGIKKEFISRLICKMLDELDNLVKNIKENYKEKDFKDDLNSL HHCCCCEEEEECCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH IKELKVNTISNITDSYFRLKKGGESISINDFIYSEVSCEEIDRESHESIMFIEPIIKNEA HHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHCCCCCHHHHCCCCCCCEEEEEHHHCCCC LDYDGKLLPLYETESFLILENIISNWTIRNCNLLASEIFNICSSWPELRTVLINPELQST CCCCCCEEEEECCCCHHHHHHHHCCCEECCHHHHHHHHHHHHCCCHHHEEEEECCCHHHH RNFERFRNNINNYNRWHDYIYMPIYLYESKREYIDIIDKKFTRYFKNENREKELENLEWL HHHHHHHHCCCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH QKQVTLLVEIRDAVAPQLEVAVKYIGNLFVTFLTKVVGKAIGLVGKGILQGLGRSSSK HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]