Definition Prochlorococcus marinus str. AS9601, complete genome.
Accession NC_008816
Length 1,669,886

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The map label for this gene is 123968392

Identifier: 123968392

GI number: 123968392

Start: 743984

End: 745600

Strand: Reverse

Name: 123968392

Synonym: A9601_08591

Alternate gene names: NA

Gene position: 745600-743984 (Counterclockwise)

Preceding gene: 123968393

Following gene: 123968391

Centisome position: 44.65

GC content: 27.89

Gene sequence:

>1617_bases
TTGGAATTAATTTCAAAAAAATCGATATTGATTATTGCTCCAAGCTTAATAGCAGAATCTTTATCGCTTAAGTTAACATC
ACTAGACCAAAATTTAGACATTAATTTTAGTAATGGAAAAGGTAATAAAACTCCAGATTTAGTTATATGGAATGTTCTTA
ATTTCCAATCAGAAGATCTTATAAGTTTAGAATTATTAAAATTAAGAGAAAGATATGATGAGTCAAAGTTTCTTATAATT
CTTTCTGGCGAACTTGTTTATGAAGCAAATACCCCCACATCGTTAAATGCTGAAGGTTTTCTTTTAAATCCTAGTGCAGA
AAAAGTTCTTGAATCTATTGAAACCATTTTAAATGGAGGAAGGGTATTTGATATTGAAAATAATTCCCGAGTTCAATTAA
ACAAAAATAAGCCTCTCAGTTTTAGTCAAAAAATTCTAACTTCAGGTCTTAAACAAATAGATTCTGAAATTAACTATATA
TTCAAATATGTCAACTCTGATTCAACACCAGAATTTTATAAATTCATTTTAAAAGGAAGATTAAGAGAACTTATTACTGC
AAAATCTTTTCTAATTTTCTTATGGGGTAATTCACTAGAACTTTATACAGAGGCAGTTTACACTGAAAATAAAATAAATC
TTGAAAATAAGAACACTGTTTTCATTAAAGATAAAAACACCGCAGAAATATGGAATTTGATTTTAGATAGACTAAAAGAA
AGGTATAGCTCAACTAACTTACAGGTTGAATTTAATAATTCATCAATAATTCTCTCTGGAATAAAGAAAGAATTCATTTC
GCGACTAATTTGCAAAATGTTAGATGAGTTAGATAATTTAGTCAAAAATATTAAGGAAAACTATAAGGAGAAAGATTTTA
AAGATGATTTAAATTCTCTTATAAAAGAACTTAAAGTTAATACAATTTCAAATATCACAGACAGTTATTTTCGATTAAAA
AAAGGTGGCGAATCTATTTCAATAAATGATTTTATTTATAGTGAGGTAAGTTGCGAAGAGATAGATAGAGAATCACACGA
ATCAATAATGTTTATTGAGCCAATTATTAAAAATGAAGCTCTTGACTATGATGGAAAATTACTCCCTCTATATGAAACAG
AATCGTTTTTGATCCTTGAAAATATTATTTCAAACTGGACAATAAGGAACTGTAATTTATTAGCTTCTGAAATCTTTAAT
ATTTGTTCTTCTTGGCCTGAATTAAGAACTGTACTTATAAATCCCGAATTACAATCGACAAGAAATTTTGAAAGATTTAG
AAATAATATTAATAACTACAATCGCTGGCATGACTATATTTATATGCCTATCTACTTGTATGAGAGTAAAAGAGAATATA
TTGATATTATCGATAAAAAATTTACCCGTTACTTTAAAAATGAAAATAGAGAGAAAGAATTAGAGAATCTAGAATGGCTA
CAAAAACAAGTTACATTGTTAGTTGAGATAAGAGATGCCGTAGCACCACAGTTAGAAGTTGCTGTAAAATATATCGGTAA
TCTTTTCGTAACTTTCCTTACAAAGGTCGTTGGTAAAGCTATCGGTTTAGTGGGGAAAGGAATCCTTCAAGGATTAGGAA
GATCAAGTTCAAAGTAA

Upstream 100 bases:

>100_bases
AACACAAATTACTACGCTTAAAAGAGTATAAAAATTGATTTAAGGCTGGTGTTTGCAGTAATTGTTAGTTAATTTTGTAT
AAGAGATAAGAAATCTAGTC

Downstream 100 bases:

>100_bases
GTTATTAAACTTTAATGAAAATAATTCAATGGATCCTGATAGCATTAATTTTCTTAAGCCCATTTAAAGCAAATGCCTCT
AGAGATACTGATAGTTACGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 538; Mature: 538

Protein sequence:

>538_residues
MELISKKSILIIAPSLIAESLSLKLTSLDQNLDINFSNGKGNKTPDLVIWNVLNFQSEDLISLELLKLRERYDESKFLII
LSGELVYEANTPTSLNAEGFLLNPSAEKVLESIETILNGGRVFDIENNSRVQLNKNKPLSFSQKILTSGLKQIDSEINYI
FKYVNSDSTPEFYKFILKGRLRELITAKSFLIFLWGNSLELYTEAVYTENKINLENKNTVFIKDKNTAEIWNLILDRLKE
RYSSTNLQVEFNNSSIILSGIKKEFISRLICKMLDELDNLVKNIKENYKEKDFKDDLNSLIKELKVNTISNITDSYFRLK
KGGESISINDFIYSEVSCEEIDRESHESIMFIEPIIKNEALDYDGKLLPLYETESFLILENIISNWTIRNCNLLASEIFN
ICSSWPELRTVLINPELQSTRNFERFRNNINNYNRWHDYIYMPIYLYESKREYIDIIDKKFTRYFKNENREKELENLEWL
QKQVTLLVEIRDAVAPQLEVAVKYIGNLFVTFLTKVVGKAIGLVGKGILQGLGRSSSK

Sequences:

>Translated_538_residues
MELISKKSILIIAPSLIAESLSLKLTSLDQNLDINFSNGKGNKTPDLVIWNVLNFQSEDLISLELLKLRERYDESKFLII
LSGELVYEANTPTSLNAEGFLLNPSAEKVLESIETILNGGRVFDIENNSRVQLNKNKPLSFSQKILTSGLKQIDSEINYI
FKYVNSDSTPEFYKFILKGRLRELITAKSFLIFLWGNSLELYTEAVYTENKINLENKNTVFIKDKNTAEIWNLILDRLKE
RYSSTNLQVEFNNSSIILSGIKKEFISRLICKMLDELDNLVKNIKENYKEKDFKDDLNSLIKELKVNTISNITDSYFRLK
KGGESISINDFIYSEVSCEEIDRESHESIMFIEPIIKNEALDYDGKLLPLYETESFLILENIISNWTIRNCNLLASEIFN
ICSSWPELRTVLINPELQSTRNFERFRNNINNYNRWHDYIYMPIYLYESKREYIDIIDKKFTRYFKNENREKELENLEWL
QKQVTLLVEIRDAVAPQLEVAVKYIGNLFVTFLTKVVGKAIGLVGKGILQGLGRSSSK
>Mature_538_residues
MELISKKSILIIAPSLIAESLSLKLTSLDQNLDINFSNGKGNKTPDLVIWNVLNFQSEDLISLELLKLRERYDESKFLII
LSGELVYEANTPTSLNAEGFLLNPSAEKVLESIETILNGGRVFDIENNSRVQLNKNKPLSFSQKILTSGLKQIDSEINYI
FKYVNSDSTPEFYKFILKGRLRELITAKSFLIFLWGNSLELYTEAVYTENKINLENKNTVFIKDKNTAEIWNLILDRLKE
RYSSTNLQVEFNNSSIILSGIKKEFISRLICKMLDELDNLVKNIKENYKEKDFKDDLNSLIKELKVNTISNITDSYFRLK
KGGESISINDFIYSEVSCEEIDRESHESIMFIEPIIKNEALDYDGKLLPLYETESFLILENIISNWTIRNCNLLASEIFN
ICSSWPELRTVLINPELQSTRNFERFRNNINNYNRWHDYIYMPIYLYESKREYIDIIDKKFTRYFKNENREKELENLEWL
QKQVTLLVEIRDAVAPQLEVAVKYIGNLFVTFLTKVVGKAIGLVGKGILQGLGRSSSK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001789
- InterPro:   IPR016837
- InterPro:   IPR022552 [H]

Pfam domain/function: PF12452 DUF3685; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 62394; Mature: 62394

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELISKKSILIIAPSLIAESLSLKLTSLDQNLDINFSNGKGNKTPDLVIWNVLNFQSEDL
CCCCCCCCEEEEEHHHHHHHHHEEEEECCCCCEEEECCCCCCCCCCEEEEEEECCCCCCH
ISLELLKLRERYDESKFLIILSGELVYEANTPTSLNAEGFLLNPSAEKVLESIETILNGG
HHHHHHHHHHHCCCCCEEEEEECCEEEECCCCCCCCCCCEEECCCHHHHHHHHHHHHCCC
RVFDIENNSRVQLNKNKPLSFSQKILTSGLKQIDSEINYIFKYVNSDSTPEFYKFILKGR
EEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
LRELITAKSFLIFLWGNSLELYTEAVYTENKINLENKNTVFIKDKNTAEIWNLILDRLKE
HHHHHHHHHEEEEEECCCHHHHHHHHEECCEEEECCCCEEEEECCCHHHHHHHHHHHHHH
RYSSTNLQVEFNNSSIILSGIKKEFISRLICKMLDELDNLVKNIKENYKEKDFKDDLNSL
HHCCCCEEEEECCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
IKELKVNTISNITDSYFRLKKGGESISINDFIYSEVSCEEIDRESHESIMFIEPIIKNEA
HHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHCCCCCHHHHCCCCCCCEEEEEHHHCCCC
LDYDGKLLPLYETESFLILENIISNWTIRNCNLLASEIFNICSSWPELRTVLINPELQST
CCCCCCEEEEECCCCHHHHHHHHCCCEECCHHHHHHHHHHHHCCCHHHEEEEECCCHHHH
RNFERFRNNINNYNRWHDYIYMPIYLYESKREYIDIIDKKFTRYFKNENREKELENLEWL
HHHHHHHHCCCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
QKQVTLLVEIRDAVAPQLEVAVKYIGNLFVTFLTKVVGKAIGLVGKGILQGLGRSSSK
HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MELISKKSILIIAPSLIAESLSLKLTSLDQNLDINFSNGKGNKTPDLVIWNVLNFQSEDL
CCCCCCCCEEEEEHHHHHHHHHEEEEECCCCCEEEECCCCCCCCCCEEEEEEECCCCCCH
ISLELLKLRERYDESKFLIILSGELVYEANTPTSLNAEGFLLNPSAEKVLESIETILNGG
HHHHHHHHHHHCCCCCEEEEEECCEEEECCCCCCCCCCCEEECCCHHHHHHHHHHHHCCC
RVFDIENNSRVQLNKNKPLSFSQKILTSGLKQIDSEINYIFKYVNSDSTPEFYKFILKGR
EEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
LRELITAKSFLIFLWGNSLELYTEAVYTENKINLENKNTVFIKDKNTAEIWNLILDRLKE
HHHHHHHHHEEEEEECCCHHHHHHHHEECCEEEECCCCEEEEECCCHHHHHHHHHHHHHH
RYSSTNLQVEFNNSSIILSGIKKEFISRLICKMLDELDNLVKNIKENYKEKDFKDDLNSL
HHCCCCEEEEECCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
IKELKVNTISNITDSYFRLKKGGESISINDFIYSEVSCEEIDRESHESIMFIEPIIKNEA
HHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHCCCCCHHHHCCCCCCCEEEEEHHHCCCC
LDYDGKLLPLYETESFLILENIISNWTIRNCNLLASEIFNICSSWPELRTVLINPELQST
CCCCCCEEEEECCCCHHHHHHHHCCCEECCHHHHHHHHHHHHCCCHHHEEEEECCCHHHH
RNFERFRNNINNYNRWHDYIYMPIYLYESKREYIDIIDKKFTRYFKNENREKELENLEWL
HHHHHHHHCCCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
QKQVTLLVEIRDAVAPQLEVAVKYIGNLFVTFLTKVVGKAIGLVGKGILQGLGRSSSK
HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]