Click here to switch to the map view.

The map label for this gene is sepF [H]

Identifier: 123967983

GI number: 123967983

Start: 386836

End: 387411

Strand: Direct

Name: sepF [H]

Synonym: A9601_04461

Alternate gene names: 123967983

Gene position: 386836-387411 (Clockwise)

Preceding gene: 123967982

Following gene: 123967984

Centisome position: 23.17

GC content: 35.59

Gene sequence:

>576_bases
GTGTCACTTATTTCTAGATTAAAGGCAGTTGTTGCAGGGGATGAGTATCTCGATGATGATTTTGATGAGTTGGATTATCC
TTCAGAGGATGAATTAAATGATATTAATAATTTCAAACAAAATCCAAAGAATTCAAATGCCCTTGCAAATTCAAATCCAT
TCGATTTTATGAATAACAACAGATCATCAAAAGTAGTTGGTATGCCAGGAATCTCAAATTCATCCTCAGAAGTTAGCTTA
ATGGAACCAAGAAGTTTTGATGAGATGCCTCAAGCTATACAAGCATTAAGAGAGAGAAAAACTGTAATTCTCAATTTAAC
TATGATGGATCCTGATCAGGCTCAAAGAGCTGTTGATTTTATTGCTGGGGGAACATATGCAATTGATGGACATCAAGAGA
GAGTCGGTGAAAGTATTTTTCTTTTTGCTCCAAGTTGTGTAAATGTAACTAGTTCTTCCCCAGAAGAAGCTTCTCCTTCT
TCTGTGTCTACAGAAAACACACCACAATATAGTTTGGGCAAAAATACTACTCCTGAACCAGCATGGGGTAATTCTAAATT
AAGTGCTTATTCATGA

Upstream 100 bases:

>100_bases
ACTAACGTTATTTAAGTATAGGTAGTTTATTCATTTAAAAAATGAATCTAATACTTAAGGTTCTTAAACCTTAGTAATTA
ATTTCAAGAGGATTTAAAAG

Downstream 100 bases:

>100_bases
TTAATCTGTGACAGATAAAATTGCGATTATTGGTTTTGGAAATATTGCAAGCGCTATAGTTACCCCTTTATTAGATAACA
AATTAATTCAGCCAGAGAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 191; Mature: 190

Protein sequence:

>191_residues
MSLISRLKAVVAGDEYLDDDFDELDYPSEDELNDINNFKQNPKNSNALANSNPFDFMNNNRSSKVVGMPGISNSSSEVSL
MEPRSFDEMPQAIQALRERKTVILNLTMMDPDQAQRAVDFIAGGTYAIDGHQERVGESIFLFAPSCVNVTSSSPEEASPS
SVSTENTPQYSLGKNTTPEPAWGNSKLSAYS

Sequences:

>Translated_191_residues
MSLISRLKAVVAGDEYLDDDFDELDYPSEDELNDINNFKQNPKNSNALANSNPFDFMNNNRSSKVVGMPGISNSSSEVSL
MEPRSFDEMPQAIQALRERKTVILNLTMMDPDQAQRAVDFIAGGTYAIDGHQERVGESIFLFAPSCVNVTSSSPEEASPS
SVSTENTPQYSLGKNTTPEPAWGNSKLSAYS
>Mature_190_residues
SLISRLKAVVAGDEYLDDDFDELDYPSEDELNDINNFKQNPKNSNALANSNPFDFMNNNRSSKVVGMPGISNSSSEVSLM
EPRSFDEMPQAIQALRERKTVILNLTMMDPDQAQRAVDFIAGGTYAIDGHQERVGESIFLFAPSCVNVTSSSPEEASPSS
VSTENTPQYSLGKNTTPEPAWGNSKLSAYS

Specific function: Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of ftsZ protofilaments. Its function overlaps with ftsA [H]

COG id: COG1799

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm. Note=Localizes to the division site, in a ftsZ-dependent manner (By similarity) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sepF family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023052
- InterPro:   IPR007561 [H]

Pfam domain/function: PF04472 DUF552 [H]

EC number: NA

Molecular weight: Translated: 20913; Mature: 20782

Theoretical pI: Translated: 4.08; Mature: 4.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLISRLKAVVAGDEYLDDDFDELDYPSEDELNDINNFKQNPKNSNALANSNPFDFMNNN
CHHHHHHHHHHCCCHHHCCCHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
RSSKVVGMPGISNSSSEVSLMEPRSFDEMPQAIQALRERKTVILNLTMMDPDQAQRAVDF
CCCEEEECCCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCEEEEEEEECCHHHHHHHHHH
IAGGTYAIDGHQERVGESIFLFAPSCVNVTSSSPEEASPSSVSTENTPQYSLGKNTTPEP
HCCCEEEECCCHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AWGNSKLSAYS
CCCCCCCCCCC
>Mature Secondary Structure 
SLISRLKAVVAGDEYLDDDFDELDYPSEDELNDINNFKQNPKNSNALANSNPFDFMNNN
HHHHHHHHHHCCCHHHCCCHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
RSSKVVGMPGISNSSSEVSLMEPRSFDEMPQAIQALRERKTVILNLTMMDPDQAQRAVDF
CCCEEEECCCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCEEEEEEEECCHHHHHHHHHH
IAGGTYAIDGHQERVGESIFLFAPSCVNVTSSSPEEASPSSVSTENTPQYSLGKNTTPEP
HCCCEEEECCCHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AWGNSKLSAYS
CCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA