Definition Prochlorococcus marinus str. AS9601, complete genome.
Accession NC_008816
Length 1,669,886

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The map label for this gene is 123967705

Identifier: 123967705

GI number: 123967705

Start: 158375

End: 159196

Strand: Direct

Name: 123967705

Synonym: A9601_01681

Alternate gene names: NA

Gene position: 158375-159196 (Clockwise)

Preceding gene: 123967704

Following gene: 123967706

Centisome position: 9.48

GC content: 33.58

Gene sequence:

>822_bases
TTGTTGATTAAGTTTCTTCAAGATGCCGCAGGTAAAGGTGAGCTTGATCCATGGGATATTGATGTAATAAGTGTAATTGA
TAGTTTTTTAGAGCAATACACTTATACTTTTAATCAATCTTCAAATAGTCAAATCTCATATCAGAAGGATTTAGCCGAGA
CCAGCGAAGCATTTTTTGCGGCTTCCGTACTAGTTAATCTTAAGGCTGAGGTTTTGGAAGCTGATGTTTTTAAAGAGAAT
TCTTCAGACTTTGAAGATGAATTTGATTTGGATGATCAAGATTGGATAGATAAAGAATTTGACGTCCCAAAATATCCTGA
AAAATATCTAAGAAGAAGATCAATTGCCCAACCAATTCTTAAACGTACAACAACGTTGGGAGAACTTGTAAGTCAGTTAG
AGTCCATAGCAGAAGTTATAGAAACCCAAGATCTTCTGCTTATGAAGAGAAAAAGAAATAAAAAATATTCTGATAAGGCT
TTAATTTCTCAAGTAAAATCTTTAGCACATCGCGAGAAACTTCCAGAAACAACTAAAGCATTGGGGAAATTTATCGACGG
ATGGGAAAAAGCATTACAATGGACAGACTTTGAATATTTAGTCAAAAAATGGCAAACAGTTGTAAAAAATGACTTAGATA
AAGATCGTTTGGGAGTTTTTTGGGCTTTGTTATTTTTATCATCTGAAAACAAAATTGAAATCAAACAAATTAATTCCTTG
TATGGTCCAATTCAAATTAAAAGAATAATACCTGATGGTGGCTTAGCTCAACTGCCTATAGAAAATCTTGAGGTAAGTAA
TGTCTCTTCCTCGGCTGCTTAG

Upstream 100 bases:

>100_bases
TTTGGCATTAAATAAATTAAAAGATATCTTGTGAGTAGATTTTATCTATTTTAAAATAACTTATTTCAATCCTATTGATA
GGCAACAATTAGGCCCTAGA

Downstream 100 bases:

>100_bases
AAGCTTAATAGTAATAACGTATAATTTTAAAAAATGGTTTTGAATTTATGAAGGCAATGATACTTGCGGCAGGTAAAGGT
ACACGTGTTCAGCCTATTAC

Product: hypothetical protein

Products: NA

Alternate protein names: Chromosome Segregation And Condensation Protein ScpA; Condensin Subunit ScpA; ScpA/B Protein

Number of amino acids: Translated: 273; Mature: 273

Protein sequence:

>273_residues
MLIKFLQDAAGKGELDPWDIDVISVIDSFLEQYTYTFNQSSNSQISYQKDLAETSEAFFAASVLVNLKAEVLEADVFKEN
SSDFEDEFDLDDQDWIDKEFDVPKYPEKYLRRRSIAQPILKRTTTLGELVSQLESIAEVIETQDLLLMKRKRNKKYSDKA
LISQVKSLAHREKLPETTKALGKFIDGWEKALQWTDFEYLVKKWQTVVKNDLDKDRLGVFWALLFLSSENKIEIKQINSL
YGPIQIKRIIPDGGLAQLPIENLEVSNVSSSAA

Sequences:

>Translated_273_residues
MLIKFLQDAAGKGELDPWDIDVISVIDSFLEQYTYTFNQSSNSQISYQKDLAETSEAFFAASVLVNLKAEVLEADVFKEN
SSDFEDEFDLDDQDWIDKEFDVPKYPEKYLRRRSIAQPILKRTTTLGELVSQLESIAEVIETQDLLLMKRKRNKKYSDKA
LISQVKSLAHREKLPETTKALGKFIDGWEKALQWTDFEYLVKKWQTVVKNDLDKDRLGVFWALLFLSSENKIEIKQINSL
YGPIQIKRIIPDGGLAQLPIENLEVSNVSSSAA
>Mature_273_residues
MLIKFLQDAAGKGELDPWDIDVISVIDSFLEQYTYTFNQSSNSQISYQKDLAETSEAFFAASVLVNLKAEVLEADVFKEN
SSDFEDEFDLDDQDWIDKEFDVPKYPEKYLRRRSIAQPILKRTTTLGELVSQLESIAEVIETQDLLLMKRKRNKKYSDKA
LISQVKSLAHREKLPETTKALGKFIDGWEKALQWTDFEYLVKKWQTVVKNDLDKDRLGVFWALLFLSSENKIEIKQINSL
YGPIQIKRIIPDGGLAQLPIENLEVSNVSSSAA

Specific function: Unknown

COG id: COG1354

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31327; Mature: 31327

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure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HCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA