Definition Prochlorococcus marinus str. AS9601, complete genome.
Accession NC_008816
Length 1,669,886

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The map label for this gene is 123967538

Identifier: 123967538

GI number: 123967538

Start: 1327

End: 2034

Strand: Direct

Name: 123967538

Synonym: A9601_00011

Alternate gene names: NA

Gene position: 1327-2034 (Clockwise)

Preceding gene: 123967537

Following gene: 123967539

Centisome position: 0.08

GC content: 27.26

Gene sequence:

>708_bases
TTGAAATTACCTAAAGAAATTTTATTAAGTGAATTATTAAATTATATTGTTAAGGGCAATATGGTCCTTAATTATGGAAA
TGGTGAAAATGTTTGGATGCATCCTCCAGTTCATCGAATTTTAGGATGGTACTCTCGTCCTTCAAATTTTGATTTAAAAA
GAAATGTTTGGCGATTAAATCAAATTACTCAAATAATAGATAATGAAATTTATGTCAAAGGTGATCCAGCTATTTCGGAT
TTAGCAACTTTAAATAGGTTCCCAACTTTAATAGAAGCTAATCTTATAAATATAAATGGATCAAAAATAGGAGTCATTGC
AGATTTTCTATTTGAAATGAAAACGGGAAACATTAAGTATTACTTAGTTTCTAGATCTAACCCTAAGATTCCAGGTTCTA
GTAGATGGAAATTAACTATTGATAATATCAATGATCAACAACCGGGATTGGTATTTTGTAAAAGCAATTCGTTAGATGAT
TTATCTTTAATAAAATCAAGTATTAAAAATGAATTTATGCAAAAAGGGAAAAAAATTTTTGATAGATTTGATGATATGAA
AAATATTGCTTCTAATAGATTAGAGGAATGGCTTGAAGAAGATGAAGATATAAGCGAAAATTTAGATTTTAAACAAAAAA
GTTTTTATAATAACGACAGAACCTCTAGAGAGTTTAGTGAAAAAAAAGAAGATGACCCTTGGATATAA

Upstream 100 bases:

>100_bases
TTAAAGTGTAATATTGCAACTACTCCAGCTGTTTTTGTACCAGAAGATAATCTCAATTCTTTTACGTATCTAGTTATGCC
AGTGCAGGTTCGTTCTTAAC

Downstream 100 bases:

>100_bases
ATAATGATAAATCATGAAAATAATGATCTATTTGATCTTAATGAAGCATTAAAAGTTGAAAATTTAACACTTAATGATTA
CGAAGAAATTTGCAAAAGAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 235; Mature: 235

Protein sequence:

>235_residues
MKLPKEILLSELLNYIVKGNMVLNYGNGENVWMHPPVHRILGWYSRPSNFDLKRNVWRLNQITQIIDNEIYVKGDPAISD
LATLNRFPTLIEANLININGSKIGVIADFLFEMKTGNIKYYLVSRSNPKIPGSSRWKLTIDNINDQQPGLVFCKSNSLDD
LSLIKSSIKNEFMQKGKKIFDRFDDMKNIASNRLEEWLEEDEDISENLDFKQKSFYNNDRTSREFSEKKEDDPWI

Sequences:

>Translated_235_residues
MKLPKEILLSELLNYIVKGNMVLNYGNGENVWMHPPVHRILGWYSRPSNFDLKRNVWRLNQITQIIDNEIYVKGDPAISD
LATLNRFPTLIEANLININGSKIGVIADFLFEMKTGNIKYYLVSRSNPKIPGSSRWKLTIDNINDQQPGLVFCKSNSLDD
LSLIKSSIKNEFMQKGKKIFDRFDDMKNIASNRLEEWLEEDEDISENLDFKQKSFYNNDRTSREFSEKKEDDPWI
>Mature_235_residues
MKLPKEILLSELLNYIVKGNMVLNYGNGENVWMHPPVHRILGWYSRPSNFDLKRNVWRLNQITQIIDNEIYVKGDPAISD
LATLNRFPTLIEANLININGSKIGVIADFLFEMKTGNIKYYLVSRSNPKIPGSSRWKLTIDNINDQQPGLVFCKSNSLDD
LSLIKSSIKNEFMQKGKKIFDRFDDMKNIASNRLEEWLEEDEDISENLDFKQKSFYNNDRTSREFSEKKEDDPWI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27429; Mature: 27429

Theoretical pI: Translated: 5.92; Mature: 5.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLPKEILLSELLNYIVKGNMVLNYGNGENVWMHPPVHRILGWYSRPSNFDLKRNVWRLN
CCCCHHHHHHHHHHHHHCCCEEEECCCCCCEEECCCHHHHHHHCCCCCCCCHHHHHHHHH
QITQIIDNEIYVKGDPAISDLATLNRFPTLIEANLININGSKIGVIADFLFEMKTGNIKY
HHHHHHCCCEEEECCCCHHHHHHHHHCCHHEEEEEEEECCCCHHHHHHHHHHHCCCCEEE
YLVSRSNPKIPGSSRWKLTIDNINDQQPGLVFCKSNSLDDLSLIKSSIKNEFMQKGKKIF
EEEECCCCCCCCCCEEEEEECCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
DRFDDMKNIASNRLEEWLEEDEDISENLDFKQKSFYNNDRTSREFSEKKEDDPWI
HHHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHCCCCCCHHHHHHHCCCCCCC
>Mature Secondary Structure
MKLPKEILLSELLNYIVKGNMVLNYGNGENVWMHPPVHRILGWYSRPSNFDLKRNVWRLN
CCCCHHHHHHHHHHHHHCCCEEEECCCCCCEEECCCHHHHHHHCCCCCCCCHHHHHHHHH
QITQIIDNEIYVKGDPAISDLATLNRFPTLIEANLININGSKIGVIADFLFEMKTGNIKY
HHHHHHCCCEEEECCCCHHHHHHHHHCCHHEEEEEEEECCCCHHHHHHHHHHHCCCCEEE
YLVSRSNPKIPGSSRWKLTIDNINDQQPGLVFCKSNSLDDLSLIKSSIKNEFMQKGKKIF
EEEECCCCCCCCCCEEEEEECCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
DRFDDMKNIASNRLEEWLEEDEDISENLDFKQKSFYNNDRTSREFSEKKEDDPWI
HHHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHCCCCCCHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA