Click here to switch to the map view.

The map label for this gene is yhdE [C]

Identifier: 121998917

GI number: 121998917

Start: 2340358

End: 2340939

Strand: Reverse

Name: yhdE [C]

Synonym: Hhal_2138

Alternate gene names: 121998917

Gene position: 2340939-2340358 (Counterclockwise)

Preceding gene: 121998918

Following gene: 121998916

Centisome position: 87.4

GC content: 70.62

Gene sequence:

>582_bases
ATGGAGCCTTACATCATTCTCGCATCCGGGTCGCCCCGCCGACGCGAGCTGCTCGAGCGCATCGGCATCGGTTATCACAC
CCTGCCGGTGGCCGTCGACGAAACCCCCGAGCCCGGCGAGGGCGCCGAGATGTTCGTCCTGCGCATGGCCCTGGAGAAGG
CCCGGCGCGGCTACGCCGCCGCCGAGCAGCAGGCGCCGGCGCTCGGCGCAGACACCGCGGTGGTCCTCGATGGTGAGATC
TTCGGCAAGCCCGGCAGCGAGGCCGAGGCCCACGGTATGCTCGAGCGCCTGTCGGCTCAGACCCACCGGGTGGTGACTGG
GGTGGCACTGGTCGACGACCGCGAGGCAACCCGGCTGTCAGTCAGCGAGGTGACCCTGCGCGAGATCACCGCCGAGGAGC
GGGCCCGCTACTGGGCCAGCGGCGAGCCGGTCGACAAGGCCGGGGCCTACGCCATCCAGGGGCGCGGCGGGGTCTTCGTC
GAACACCTGGAGGGCAGCTACACCGGGGTCATGGGGCTGCCGCTTTACGAGACCACGCTCCTGCTCGATAAGCTGGAGAT
CCCCTGGCGCGAGCGCTGGTAG

Upstream 100 bases:

>100_bases
GGTGCGGGTGCTGGTGGCCGAGCAGGTCTATCGTGCCTGGACGCTGCTCAGCGGCCATCCGTATCATCGATCGTGACGCA
CCGCCACAAGGTCTAGGGAA

Downstream 100 bases:

>100_bases
GCCCGTGTGAGCCAGGAGATCCTCATCAACCTGACGCCCCGCGAGACGCGGGTGGCGTTGGTCGAAAACGGTGTCCTCCA
GGAGGTCCACCTGGAGCGTG

Product: maf protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 193; Mature: 193

Protein sequence:

>193_residues
MEPYIILASGSPRRRELLERIGIGYHTLPVAVDETPEPGEGAEMFVLRMALEKARRGYAAAEQQAPALGADTAVVLDGEI
FGKPGSEAEAHGMLERLSAQTHRVVTGVALVDDREATRLSVSEVTLREITAEERARYWASGEPVDKAGAYAIQGRGGVFV
EHLEGSYTGVMGLPLYETTLLLDKLEIPWRERW

Sequences:

>Translated_193_residues
MEPYIILASGSPRRRELLERIGIGYHTLPVAVDETPEPGEGAEMFVLRMALEKARRGYAAAEQQAPALGADTAVVLDGEI
FGKPGSEAEAHGMLERLSAQTHRVVTGVALVDDREATRLSVSEVTLREITAEERARYWASGEPVDKAGAYAIQGRGGVFV
EHLEGSYTGVMGLPLYETTLLLDKLEIPWRERW
>Mature_193_residues
MEPYIILASGSPRRRELLERIGIGYHTLPVAVDETPEPGEGAEMFVLRMALEKARRGYAAAEQQAPALGADTAVVLDGEI
FGKPGSEAEAHGMLERLSAQTHRVVTGVALVDDREATRLSVSEVTLREITAEERARYWASGEPVDKAGAYAIQGRGGVFV
EHLEGSYTGVMGLPLYETTLLLDKLEIPWRERW

Specific function: Unknown

COG id: COG0424

COG function: function code D; Nucleotide-binding protein implicated in inhibition of septum formation

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the maf family [H]

Homologues:

Organism=Homo sapiens, GI117553627, Length=203, Percent_Identity=37.9310344827586, Blast_Score=110, Evalue=1e-24,
Organism=Homo sapiens, GI291045183, Length=197, Percent_Identity=35.0253807106599, Blast_Score=99, Evalue=3e-21,
Organism=Homo sapiens, GI291045181, Length=152, Percent_Identity=41.4473684210526, Blast_Score=91, Evalue=5e-19,
Organism=Homo sapiens, GI310133124, Length=132, Percent_Identity=41.6666666666667, Blast_Score=88, Evalue=5e-18,
Organism=Escherichia coli, GI1789646, Length=189, Percent_Identity=48.1481481481481, Blast_Score=168, Evalue=2e-43,
Organism=Escherichia coli, GI87081830, Length=184, Percent_Identity=35.3260869565217, Blast_Score=93, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI193202443, Length=186, Percent_Identity=34.4086021505376, Blast_Score=87, Evalue=6e-18,
Organism=Drosophila melanogaster, GI78706856, Length=189, Percent_Identity=35.4497354497354, Blast_Score=110, Evalue=4e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003697 [H]

Pfam domain/function: PF02545 Maf [H]

EC number: NA

Molecular weight: Translated: 21161; Mature: 21161

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEPYIILASGSPRRRELLERIGIGYHTLPVAVDETPEPGEGAEMFVLRMALEKARRGYAA
CCCEEEEECCCCHHHHHHHHHCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCHH
AEQQAPALGADTAVVLDGEIFGKPGSEAEAHGMLERLSAQTHRVVTGVALVDDREATRLS
HHHCCCCCCCCEEEEECCEEECCCCCCHHHHHHHHHHHHHHHHHEEEEEEECCCCCCEEE
VSEVTLREITAEERARYWASGEPVDKAGAYAIQGRGGVFVEHLEGSYTGVMGLPLYETTL
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCEEEEECCCCCCEEEECCHHHHHH
LLDKLEIPWRERW
HHHHCCCCCCCCC
>Mature Secondary Structure
MEPYIILASGSPRRRELLERIGIGYHTLPVAVDETPEPGEGAEMFVLRMALEKARRGYAA
CCCEEEEECCCCHHHHHHHHHCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCHH
AEQQAPALGADTAVVLDGEIFGKPGSEAEAHGMLERLSAQTHRVVTGVALVDDREATRLS
HHHCCCCCCCCEEEEECCEEECCCCCCHHHHHHHHHHHHHHHHHEEEEEEECCCCCCEEE
VSEVTLREITAEERARYWASGEPVDKAGAYAIQGRGGVFVEHLEGSYTGVMGLPLYETTL
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCEEEEECCCCCCEEEECCHHHHHH
LLDKLEIPWRERW
HHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA