Definition Halorhodospira halophila SL1 chromosome, complete genome.
Accession NC_008789
Length 2,678,452

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The map label for this gene is 121998819

Identifier: 121998819

GI number: 121998819

Start: 2243663

End: 2244199

Strand: Reverse

Name: 121998819

Synonym: Hhal_2040

Alternate gene names: NA

Gene position: 2244199-2243663 (Counterclockwise)

Preceding gene: 121998820

Following gene: 121998818

Centisome position: 83.79

GC content: 65.36

Gene sequence:

>537_bases
ATGCACACGGGTGTCAAGCAGACCCTTGCCGGTGTGGCCCTGATCTCGGCTACGGCCTTCGCCGCCTCGGCCAGCGCCGA
GACCTTCTTCTTCAAGTACGGCCACACACCGGTCTACACCGCCTTCGACTCCGATGCCGAGGACAGCGACATCTCCGCCA
ACGGCTTCGACTTCGGCGTCCACCTCAACGACGAGTTCCGCATGGGCGTTTACTACGAGCGGCTGGATGGTGAAGGTGAC
GCAAACGCCGATATTCGCGGGCTGACCGCCGAGTACGATCTGGTGGGCGGCGTCGGCTTTGCCACCAGCGTCGGCATGAT
GTTCGGCCAGGCCGCCGCTGATGCCACGGCCACCGACGTCTACGGCCGCTTCGCCCTGGACACCGGCGACACCTCGGAGA
TGTTTGCCAAGGTCGCCTACCGGGGGACCAACGCCGGCGGCTGGGACGATTTCGGCGAAGATGGCGCCGCTGCCGACGAT
CTGCCCGACGACCTGGACGGCCTCTACCTGAATGTCGGCTTCGGCTTCGGCTTCTGA

Upstream 100 bases:

>100_bases
GTGTCGGCTTCGGCGTCCACTTCTGACTGAGGATCCGATCCGCCAACGGACCCCGCTCCCGCAGGTGGGAGCAGCCCAGC
GCAAACAGAGGAGGTTGACC

Downstream 100 bases:

>100_bases
GCCGTCCGCGGTGGCTCCTTCGTCCCGGCGCTGATTACAGCGCGCTGACCCCGGTGCCCGCGGCCCCGGGCCGCCGGGCA
CGGGGGTCCTTTCTGTCCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 178; Mature: 178

Protein sequence:

>178_residues
MHTGVKQTLAGVALISATAFAASASAETFFFKYGHTPVYTAFDSDAEDSDISANGFDFGVHLNDEFRMGVYYERLDGEGD
ANADIRGLTAEYDLVGGVGFATSVGMMFGQAAADATATDVYGRFALDTGDTSEMFAKVAYRGTNAGGWDDFGEDGAAADD
LPDDLDGLYLNVGFGFGF

Sequences:

>Translated_178_residues
MHTGVKQTLAGVALISATAFAASASAETFFFKYGHTPVYTAFDSDAEDSDISANGFDFGVHLNDEFRMGVYYERLDGEGD
ANADIRGLTAEYDLVGGVGFATSVGMMFGQAAADATATDVYGRFALDTGDTSEMFAKVAYRGTNAGGWDDFGEDGAAADD
LPDDLDGLYLNVGFGFGF
>Mature_178_residues
MHTGVKQTLAGVALISATAFAASASAETFFFKYGHTPVYTAFDSDAEDSDISANGFDFGVHLNDEFRMGVYYERLDGEGD
ANADIRGLTAEYDLVGGVGFATSVGMMFGQAAADATATDVYGRFALDTGDTSEMFAKVAYRGTNAGGWDDFGEDGAAADD
LPDDLDGLYLNVGFGFGF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18714; Mature: 18714

Theoretical pI: Translated: 3.74; Mature: 3.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHTGVKQTLAGVALISATAFAASASAETFFFKYGHTPVYTAFDSDAEDSDISANGFDFGV
CCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEEECCCCCCCCCCCCCEEEEE
HLNDEFRMGVYYERLDGEGDANADIRGLTAEYDLVGGVGFATSVGMMFGQAAADATATDV
EECCCEEEEEEEEECCCCCCCCCCEEEEEEEEEEECCCHHHHHHHHHHHHHHCCCCHHHH
YGRFALDTGDTSEMFAKVAYRGTNAGGWDDFGEDGAAADDLPDDLDGLYLNVGFGFGF
CEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCC
>Mature Secondary Structure
MHTGVKQTLAGVALISATAFAASASAETFFFKYGHTPVYTAFDSDAEDSDISANGFDFGV
CCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEEECCCCCCCCCCCCCEEEEE
HLNDEFRMGVYYERLDGEGDANADIRGLTAEYDLVGGVGFATSVGMMFGQAAADATATDV
EECCCEEEEEEEEECCCCCCCCCCEEEEEEEEEEECCCHHHHHHHHHHHHHHCCCCHHHH
YGRFALDTGDTSEMFAKVAYRGTNAGGWDDFGEDGAAADDLPDDLDGLYLNVGFGFGF
CEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA