| Definition | Halorhodospira halophila SL1 chromosome, complete genome. |
|---|---|
| Accession | NC_008789 |
| Length | 2,678,452 |
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The map label for this gene is lgt
Identifier: 121998818
GI number: 121998818
Start: 2242710
End: 2243495
Strand: Reverse
Name: lgt
Synonym: Hhal_2039
Alternate gene names: 121998818
Gene position: 2243495-2242710 (Counterclockwise)
Preceding gene: 121998819
Following gene: 121998817
Centisome position: 83.76
GC content: 71.12
Gene sequence:
>786_bases ATGCTCGTCTATCCCGATATTGACCCCGTCGCCCTCCAGCTCGGGCCGGTGGCCATTCACTGGTACGGCCTGATGTACGT CGTCGGCTTCCTCGCCGCCTGGGGGCTGGGCCGCTGGCGGGCGCGCCGGTCGGACAGTCCGGTGACCGGGCAGCAGGTGG ACGACCTGGTCTTCTTCGGCGCCCTGGGGGTGATCGTCGGCGCCAAGCTCGGCTACCACCTCTTCTACAACCTCGACGGC CTGGCGGCGGATCCGCTGTCCCTGCTGCGCCTGTGGGAGGGGGGCATGTCCTTCCACGGCGGGCTGCTGGGTGTCACCGC CGCCCTGGGCGTCTACGCCTGGCGCTACCGCATCCCGCTGCTGCGCCTGAGCGACTTCGCCGCCCCCCTGGTGCCCATCG GCCTGGGGGCCGGGCGGCTGGGCAACTTCATCAACGGCGAGCTGTGGGGCCGGCCCGCCGATGTGCCGTGGGCCATGGTC TACCCGCCCCTGGGCGACGAGCCGCGCCACCCCTCGCAGCTCTACCAGATGGGGCTGGAGGGCATCGCCCTGTTCATCCT GCTGTGGTGGTTCTCGGCGAAGCCGCGCGCCCGTGGCGCCGTCACCGGCCTGTTCCTCGCCGCCTACGGCGTCTTCCGCG CCTTCGTGGAGTTCTTCCGTATGCCGGACGCCCACATCGGTTACCTGGCCTTCGGCTGGCTGACCCTGGGGCAGGTGCTC ACCCTGCCGATGATCCTCGCTGGCGTGGGGCTGATGGTCTGGGCCTGGCGGCGGCGGGATGCCTGA
Upstream 100 bases:
>100_bases GGGCCGCCGGGCACGGGGGTCCTTTCTGTCCCGCGCCGACCGCAGTGGGCCGCCGCCGGCGCGCTTGCCTTTCAGGGGCG GTCTCCACTAGCCTCCGCCC
Downstream 100 bases:
>100_bases CCCTGGTGAGAGAGAGGTCCCCATGAGGCAATCCTGGAGGCGCCTGGCTCCGTTGGCCGTGACCCTGTGCGCCGTCGCGG CCCCGGCGGCCGCCGAGATC
Product: prolipoprotein diacylglyceryl transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 261; Mature: 261
Protein sequence:
>261_residues MLVYPDIDPVALQLGPVAIHWYGLMYVVGFLAAWGLGRWRARRSDSPVTGQQVDDLVFFGALGVIVGAKLGYHLFYNLDG LAADPLSLLRLWEGGMSFHGGLLGVTAALGVYAWRYRIPLLRLSDFAAPLVPIGLGAGRLGNFINGELWGRPADVPWAMV YPPLGDEPRHPSQLYQMGLEGIALFILLWWFSAKPRARGAVTGLFLAAYGVFRAFVEFFRMPDAHIGYLAFGWLTLGQVL TLPMILAGVGLMVWAWRRRDA
Sequences:
>Translated_261_residues MLVYPDIDPVALQLGPVAIHWYGLMYVVGFLAAWGLGRWRARRSDSPVTGQQVDDLVFFGALGVIVGAKLGYHLFYNLDG LAADPLSLLRLWEGGMSFHGGLLGVTAALGVYAWRYRIPLLRLSDFAAPLVPIGLGAGRLGNFINGELWGRPADVPWAMV YPPLGDEPRHPSQLYQMGLEGIALFILLWWFSAKPRARGAVTGLFLAAYGVFRAFVEFFRMPDAHIGYLAFGWLTLGQVL TLPMILAGVGLMVWAWRRRDA >Mature_261_residues MLVYPDIDPVALQLGPVAIHWYGLMYVVGFLAAWGLGRWRARRSDSPVTGQQVDDLVFFGALGVIVGAKLGYHLFYNLDG LAADPLSLLRLWEGGMSFHGGLLGVTAALGVYAWRYRIPLLRLSDFAAPLVPIGLGAGRLGNFINGELWGRPADVPWAMV YPPLGDEPRHPSQLYQMGLEGIALFILLWWFSAKPRARGAVTGLFLAAYGVFRAFVEFFRMPDAHIGYLAFGWLTLGQVL TLPMILAGVGLMVWAWRRRDA
Specific function: Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
COG id: COG0682
COG function: function code M; Prolipoprotein diacylglyceryltransferase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the lgt family
Homologues:
Organism=Escherichia coli, GI1789192, Length=279, Percent_Identity=50.5376344086022, Blast_Score=266, Evalue=1e-72,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): LGT_HALHL (A1WYP1)
Other databases:
- EMBL: CP000544 - RefSeq: YP_001003605.1 - STRING: A1WYP1 - GeneID: 4710023 - GenomeReviews: CP000544_GR - KEGG: hha:Hhal_2039 - eggNOG: COG0682 - HOGENOM: HBG450278 - OMA: AFAPAII - PhylomeDB: A1WYP1 - ProtClustDB: PRK00052 - BioCyc: HHAL349124:HHAL_2039-MONOMER - HAMAP: MF_01147 - InterPro: IPR001640 - TIGRFAMs: TIGR00544
Pfam domain/function: PF01790 LGT
EC number: 2.4.99.- [C]
Molecular weight: Translated: 28816; Mature: 28816
Theoretical pI: Translated: 9.45; Mature: 9.45
Prosite motif: PS01311 LGT
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x1bc3f750)-; HASH(0x1b3808e8)-; HASH(0x1749a710)-; HASH(0x1b845c6c)-; HASH(0x1bca0b50)-; HASH(0x1b22b318)-; HASH(0x1bab7e54)-;
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVYPDIDPVALQLGPVAIHWYGLMYVVGFLAAWGLGRWRARRSDSPVTGQQVDDLVFFG CEECCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCHHHHHHHHHH ALGVIVGAKLGYHLFYNLDGLAADPLSLLRLWEGGMSFHGGLLGVTAALGVYAWRYRIPL HHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCH LRLSDFAAPLVPIGLGAGRLGNFINGELWGRPADVPWAMVYPPLGDEPRHPSQLYQMGLE HHHHHHCCCHHHHCCCCHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHH GIALFILLWWFSAKPRARGAVTGLFLAAYGVFRAFVEFFRMPDAHIGYLAFGWLTLGQVL HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH TLPMILAGVGLMVWAWRRRDA HHHHHHHHHHHHHHHHHHCCH >Mature Secondary Structure MLVYPDIDPVALQLGPVAIHWYGLMYVVGFLAAWGLGRWRARRSDSPVTGQQVDDLVFFG CEECCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCHHHHHHHHHH ALGVIVGAKLGYHLFYNLDGLAADPLSLLRLWEGGMSFHGGLLGVTAALGVYAWRYRIPL HHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCH LRLSDFAAPLVPIGLGAGRLGNFINGELWGRPADVPWAMVYPPLGDEPRHPSQLYQMGLE HHHHHHCCCHHHHCCCCHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHH GIALFILLWWFSAKPRARGAVTGLFLAAYGVFRAFVEFFRMPDAHIGYLAFGWLTLGQVL HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH TLPMILAGVGLMVWAWRRRDA HHHHHHHHHHHHHHHHHHCCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA