Definition Halorhodospira halophila SL1 chromosome, complete genome.
Accession NC_008789
Length 2,678,452

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The map label for this gene is 121998820

Identifier: 121998820

GI number: 121998820

Start: 2244274

End: 2244996

Strand: Reverse

Name: 121998820

Synonym: Hhal_2041

Alternate gene names: NA

Gene position: 2244996-2244274 (Counterclockwise)

Preceding gene: 121998821

Following gene: 121998819

Centisome position: 83.82

GC content: 69.02

Gene sequence:

>723_bases
GTGTATCCCGGCCTCGAATCCTGCCTGTCCGCGCCGATCCCCGGCGGCTGCCATGCGCTGGCCCGCGTCCGCGCGCCTCT
CCACGCCCCCTGTTCCGCGCTGCGGCCCACCCCGGGTTGTGCCCGGGCCGGCGGGCGGTGGCGCTTTCCGGCAACAGCCC
CTTTGAGCAAGGAGGTCTCCATGCGCAACGTTTCCCCACGCATCCTCGGCGGCTGTGCGCTGCTCACCGCGGGCGCCCTG
GTGGCGAGCCCGGCGGTGGCCGAGCACAGCTTCTTCTTCAACTACAGCCACACGCCGGTCTACACCGCGCTGGACTCCGA
CGTGGAAGACAGCGACCTCTCCGGCAACGCCTTCGAGTTCGGCACCGGTATCACCGACGAGCTGCGCGCCGGCGTCTACC
ACGAGCGGCTGGATGGCACCGGTGGTGCCAGCGCCAACATCCAGGGCATCAGCGCCGAGTACGGCATGCTCGAGACCGGC
GACTTCATGGGCAGTGTCGGCTTCATGGTGGGCAATGGCCGCTCGGACAACGGCAACAGCCTGGTGGCGGACATCTACGG
CCGCGCTGCGCTGCTGGCCAACGACCACGCCAACCTGAACGCCAAGCTGGCCTACCGCACGGTGCCGGACAGCGACTTTG
CCCAGGACTTTGACGGCGTCGCCGATGACGCCAGCGACACGCACGGCTTCACGCTGAGTGTCGGCTTCGGCGTCCACTTC
TGA

Upstream 100 bases:

>100_bases
GTTGAGCTGGTTCCGGTCCCGTTGCTAACTTCTCGTGAACGGTGGTGCGCAGGAGGCGCGCCCGGTTTCCGGGGAGTCGG
TGATAAGGAGGTCCCGCGCC

Downstream 100 bases:

>100_bases
CTGAGGATCCGATCCGCCAACGGACCCCGCTCCCGCAGGTGGGAGCAGCCCAGCGCAAACAGAGGAGGTTGACCATGCAC
ACGGGTGTCAAGCAGACCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 240; Mature: 240

Protein sequence:

>240_residues
MYPGLESCLSAPIPGGCHALARVRAPLHAPCSALRPTPGCARAGGRWRFPATAPLSKEVSMRNVSPRILGGCALLTAGAL
VASPAVAEHSFFFNYSHTPVYTALDSDVEDSDLSGNAFEFGTGITDELRAGVYHERLDGTGGASANIQGISAEYGMLETG
DFMGSVGFMVGNGRSDNGNSLVADIYGRAALLANDHANLNAKLAYRTVPDSDFAQDFDGVADDASDTHGFTLSVGFGVHF

Sequences:

>Translated_240_residues
MYPGLESCLSAPIPGGCHALARVRAPLHAPCSALRPTPGCARAGGRWRFPATAPLSKEVSMRNVSPRILGGCALLTAGAL
VASPAVAEHSFFFNYSHTPVYTALDSDVEDSDLSGNAFEFGTGITDELRAGVYHERLDGTGGASANIQGISAEYGMLETG
DFMGSVGFMVGNGRSDNGNSLVADIYGRAALLANDHANLNAKLAYRTVPDSDFAQDFDGVADDASDTHGFTLSVGFGVHF
>Mature_240_residues
MYPGLESCLSAPIPGGCHALARVRAPLHAPCSALRPTPGCARAGGRWRFPATAPLSKEVSMRNVSPRILGGCALLTAGAL
VASPAVAEHSFFFNYSHTPVYTALDSDVEDSDLSGNAFEFGTGITDELRAGVYHERLDGTGGASANIQGISAEYGMLETG
DFMGSVGFMVGNGRSDNGNSLVADIYGRAALLANDHANLNAKLAYRTVPDSDFAQDFDGVADDASDTHGFTLSVGFGVHF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25020; Mature: 25020

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYPGLESCLSAPIPGGCHALARVRAPLHAPCSALRPTPGCARAGGRWRFPATAPLSKEVS
CCCCHHHHHCCCCCCHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCEECCCCCCCCCCCH
MRNVSPRILGGCALLTAGALVASPAVAEHSFFFNYSHTPVYTALDSDVEDSDLSGNAFEF
HCCCCHHHHHHHHHHHHHHHHHCCCHHCCEEEEECCCCEEEEEECCCCCCCCCCCCEEEC
GTGITDELRAGVYHERLDGTGGASANIQGISAEYGMLETGDFMGSVGFMVGNGRSDNGNS
CCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCEECCCHHCCCCEEEECCCCCCCCE
LVADIYGRAALLANDHANLNAKLAYRTVPDSDFAQDFDGVADDASDTHGFTLSVGFGVHF
EEEECCCCEEEEECCCCCCEEEEEEEECCCCHHHHHHCCCCCCCCCCCCEEEEECCEECC
>Mature Secondary Structure
MYPGLESCLSAPIPGGCHALARVRAPLHAPCSALRPTPGCARAGGRWRFPATAPLSKEVS
CCCCHHHHHCCCCCCHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCEECCCCCCCCCCCH
MRNVSPRILGGCALLTAGALVASPAVAEHSFFFNYSHTPVYTALDSDVEDSDLSGNAFEF
HCCCCHHHHHHHHHHHHHHHHHCCCHHCCEEEEECCCCEEEEEECCCCCCCCCCCCEEEC
GTGITDELRAGVYHERLDGTGGASANIQGISAEYGMLETGDFMGSVGFMVGNGRSDNGNS
CCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCEECCCHHCCCCEEEECCCCCCCCE
LVADIYGRAALLANDHANLNAKLAYRTVPDSDFAQDFDGVADDASDTHGFTLSVGFGVHF
EEEECCCCEEEEECCCCCCEEEEEEEECCCCHHHHHHCCCCCCCCCCCCEEEEECCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA