| Definition | Halorhodospira halophila SL1 chromosome, complete genome. |
|---|---|
| Accession | NC_008789 |
| Length | 2,678,452 |
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The map label for this gene is yaiI [C]
Identifier: 121998692
GI number: 121998692
Start: 2109425
End: 2109880
Strand: Reverse
Name: yaiI [C]
Synonym: Hhal_1913
Alternate gene names: 121998692
Gene position: 2109880-2109425 (Counterclockwise)
Preceding gene: 121998693
Following gene: 121998690
Centisome position: 78.77
GC content: 69.3
Gene sequence:
>456_bases ATGAGAATCTGGGTCGACGCGGACGCCTGTCCGGGAGCCATCAAGGAGATCCTCTTTCGCGCCGCCCAGCGCACCGGGGT GGAACTGACCCTGGTGGCCAATCACCCGATCCGCGTCCCGCCGTCGCCGGTCATCCGCTCCGTTCAGGTGGCGGCTGGGT TCGATGTGGCGGACCATGAGATCGTCCGCCGGGTAGCGGCCGGGGACCTGGTGATCACCGGCGATATCCCGCTGGCCGCC GAGGTCATCGAGGCCGGCGCGCAGGCCCTCAACCCCCGCGGTGAGCGCTATACGCCGGAGACCATCCGTGAGCGGCTGAA CATGCGTGACTTCATGGATACCCTGCGCGCCAGCGGCGTGGATACCGGGGGGTCGGCCGCCCTGAGCCAGCGCGATCGGC AGGCCTTTGCCAACGAACTCGACCGCATCCTGGCCCGCCGCCCGTCGCAGGGTTGA
Upstream 100 bases:
>100_bases GAGCGGTGGCGATCGGTTACGCTGTGACGCAGCGACGGCTCGGTGGCTGATCAGCGGCCGTCGCGCTGAGACCGTTACCG AGGCAATCTGGGGGCGCATC
Downstream 100 bases:
>100_bases GCGTCGGGCGGGCTAGGAGGTGACGGTCGCGCCGTTGAGGTTCTCGTAGAGCTCGCGGAACTGCCCGGTCAGCTTGTGCT TTGGCGCCCAGTGGATCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 151; Mature: 151
Protein sequence:
>151_residues MRIWVDADACPGAIKEILFRAAQRTGVELTLVANHPIRVPPSPVIRSVQVAAGFDVADHEIVRRVAAGDLVITGDIPLAA EVIEAGAQALNPRGERYTPETIRERLNMRDFMDTLRASGVDTGGSAALSQRDRQAFANELDRILARRPSQG
Sequences:
>Translated_151_residues MRIWVDADACPGAIKEILFRAAQRTGVELTLVANHPIRVPPSPVIRSVQVAAGFDVADHEIVRRVAAGDLVITGDIPLAA EVIEAGAQALNPRGERYTPETIRERLNMRDFMDTLRASGVDTGGSAALSQRDRQAFANELDRILARRPSQG >Mature_151_residues MRIWVDADACPGAIKEILFRAAQRTGVELTLVANHPIRVPPSPVIRSVQVAAGFDVADHEIVRRVAAGDLVITGDIPLAA EVIEAGAQALNPRGERYTPETIRERLNMRDFMDTLRASGVDTGGSAALSQRDRQAFANELDRILARRPSQG
Specific function: Unknown
COG id: COG1671
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0178 family
Homologues:
Organism=Escherichia coli, GI87081732, Length=142, Percent_Identity=74.6478873239437, Blast_Score=214, Evalue=1e-57,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1913_HALHL (A1WYB5)
Other databases:
- EMBL: CP000544 - RefSeq: YP_001003479.1 - STRING: A1WYB5 - GeneID: 4710800 - GenomeReviews: CP000544_GR - KEGG: hha:Hhal_1913 - eggNOG: COG1671 - HOGENOM: HBG363074 - OMA: PLASRCV - PhylomeDB: A1WYB5 - ProtClustDB: CLSK2471465 - BioCyc: HHAL349124:HHAL_1913-MONOMER - HAMAP: MF_00489 - InterPro: IPR003791
Pfam domain/function: PF02639 DUF188
EC number: NA
Molecular weight: Translated: 16394; Mature: 16394
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIWVDADACPGAIKEILFRAAQRTGVELTLVANHPIRVPPSPVIRSVQVAAGFDVADHE CEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCHHHHH IVRRVAAGDLVITGDIPLAAEVIEAGAQALNPRGERYTPETIRERLNMRDFMDTLRASGV HHHHHHCCCEEEECCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCHHHHHHHHHHCCC DTGGSAALSQRDRQAFANELDRILARRPSQG CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MRIWVDADACPGAIKEILFRAAQRTGVELTLVANHPIRVPPSPVIRSVQVAAGFDVADHE CEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCHHHHH IVRRVAAGDLVITGDIPLAAEVIEAGAQALNPRGERYTPETIRERLNMRDFMDTLRASGV HHHHHHCCCEEEECCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCHHHHHHHHHHCCC DTGGSAALSQRDRQAFANELDRILARRPSQG CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA