Definition Halorhodospira halophila SL1 chromosome, complete genome.
Accession NC_008789
Length 2,678,452

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The map label for this gene is yaiI [C]

Identifier: 121998692

GI number: 121998692

Start: 2109425

End: 2109880

Strand: Reverse

Name: yaiI [C]

Synonym: Hhal_1913

Alternate gene names: 121998692

Gene position: 2109880-2109425 (Counterclockwise)

Preceding gene: 121998693

Following gene: 121998690

Centisome position: 78.77

GC content: 69.3

Gene sequence:

>456_bases
ATGAGAATCTGGGTCGACGCGGACGCCTGTCCGGGAGCCATCAAGGAGATCCTCTTTCGCGCCGCCCAGCGCACCGGGGT
GGAACTGACCCTGGTGGCCAATCACCCGATCCGCGTCCCGCCGTCGCCGGTCATCCGCTCCGTTCAGGTGGCGGCTGGGT
TCGATGTGGCGGACCATGAGATCGTCCGCCGGGTAGCGGCCGGGGACCTGGTGATCACCGGCGATATCCCGCTGGCCGCC
GAGGTCATCGAGGCCGGCGCGCAGGCCCTCAACCCCCGCGGTGAGCGCTATACGCCGGAGACCATCCGTGAGCGGCTGAA
CATGCGTGACTTCATGGATACCCTGCGCGCCAGCGGCGTGGATACCGGGGGGTCGGCCGCCCTGAGCCAGCGCGATCGGC
AGGCCTTTGCCAACGAACTCGACCGCATCCTGGCCCGCCGCCCGTCGCAGGGTTGA

Upstream 100 bases:

>100_bases
GAGCGGTGGCGATCGGTTACGCTGTGACGCAGCGACGGCTCGGTGGCTGATCAGCGGCCGTCGCGCTGAGACCGTTACCG
AGGCAATCTGGGGGCGCATC

Downstream 100 bases:

>100_bases
GCGTCGGGCGGGCTAGGAGGTGACGGTCGCGCCGTTGAGGTTCTCGTAGAGCTCGCGGAACTGCCCGGTCAGCTTGTGCT
TTGGCGCCCAGTGGATCAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 151; Mature: 151

Protein sequence:

>151_residues
MRIWVDADACPGAIKEILFRAAQRTGVELTLVANHPIRVPPSPVIRSVQVAAGFDVADHEIVRRVAAGDLVITGDIPLAA
EVIEAGAQALNPRGERYTPETIRERLNMRDFMDTLRASGVDTGGSAALSQRDRQAFANELDRILARRPSQG

Sequences:

>Translated_151_residues
MRIWVDADACPGAIKEILFRAAQRTGVELTLVANHPIRVPPSPVIRSVQVAAGFDVADHEIVRRVAAGDLVITGDIPLAA
EVIEAGAQALNPRGERYTPETIRERLNMRDFMDTLRASGVDTGGSAALSQRDRQAFANELDRILARRPSQG
>Mature_151_residues
MRIWVDADACPGAIKEILFRAAQRTGVELTLVANHPIRVPPSPVIRSVQVAAGFDVADHEIVRRVAAGDLVITGDIPLAA
EVIEAGAQALNPRGERYTPETIRERLNMRDFMDTLRASGVDTGGSAALSQRDRQAFANELDRILARRPSQG

Specific function: Unknown

COG id: COG1671

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0178 family

Homologues:

Organism=Escherichia coli, GI87081732, Length=142, Percent_Identity=74.6478873239437, Blast_Score=214, Evalue=1e-57,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1913_HALHL (A1WYB5)

Other databases:

- EMBL:   CP000544
- RefSeq:   YP_001003479.1
- STRING:   A1WYB5
- GeneID:   4710800
- GenomeReviews:   CP000544_GR
- KEGG:   hha:Hhal_1913
- eggNOG:   COG1671
- HOGENOM:   HBG363074
- OMA:   PLASRCV
- PhylomeDB:   A1WYB5
- ProtClustDB:   CLSK2471465
- BioCyc:   HHAL349124:HHAL_1913-MONOMER
- HAMAP:   MF_00489
- InterPro:   IPR003791

Pfam domain/function: PF02639 DUF188

EC number: NA

Molecular weight: Translated: 16394; Mature: 16394

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIWVDADACPGAIKEILFRAAQRTGVELTLVANHPIRVPPSPVIRSVQVAAGFDVADHE
CEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCHHHHH
IVRRVAAGDLVITGDIPLAAEVIEAGAQALNPRGERYTPETIRERLNMRDFMDTLRASGV
HHHHHHCCCEEEECCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCHHHHHHHHHHCCC
DTGGSAALSQRDRQAFANELDRILARRPSQG
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MRIWVDADACPGAIKEILFRAAQRTGVELTLVANHPIRVPPSPVIRSVQVAAGFDVADHE
CEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCHHHHH
IVRRVAAGDLVITGDIPLAAEVIEAGAQALNPRGERYTPETIRERLNMRDFMDTLRASGV
HHHHHHCCCEEEECCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCHHHHHHHHHHCCC
DTGGSAALSQRDRQAFANELDRILARRPSQG
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA