Definition Halorhodospira halophila SL1 chromosome, complete genome.
Accession NC_008789
Length 2,678,452

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The map label for this gene is ybaR [H]

Identifier: 121998690

GI number: 121998690

Start: 2106791

End: 2108284

Strand: Reverse

Name: ybaR [H]

Synonym: Hhal_1911

Alternate gene names: 121998690

Gene position: 2108284-2106791 (Counterclockwise)

Preceding gene: 121998692

Following gene: 121998689

Centisome position: 78.71

GC content: 63.86

Gene sequence:

>1494_bases
ATGAACTGGGATCGGATTCAACGGGAGTGGTTCGGCAACGTGCGGGCCGACGTGCTGGCGGGCATCATCGTTGCGCTGGC
GTTGATCCCTGAGGCGATTGCCTTTTCGATCATGGCGGGCGTCGACCCGCAGGTGGGGCTCTACGCCTCGTTCTGCATCG
CCGTGGTGATCGCCTTCACCGGCGGCCGGCCCGGCATGATCTCCGGGGCGACGGCGGCGATGGCGCTGCTGATGATCACC
CTGGTCAAGGACCACGGGCTGGAGTACCTGCTGTTCGCTACGCTGCTGACCGGCGTGCTGCAGATCATCGCCGGCTACCT
GCGGGTCGGGCAGTTGATGCGCTTTATCTCCAACTCGGTGATGACCGGGTTCGTGAACGCCCTGGCGATCCTCATCTTCA
TGGCGCAGCTACCCGAGCTGATCGATGTCCCCTGGGCGGTGTACCCCATGGTCGCCGGTGGCCTGGCGCTGATCTATCTG
CTCCCCTACCTGACGCGGCTGGTGCCGTCGCCGCTGGTCACCATCGTGGTGCTGACCACGATCGCCTGGTTCCTCGGTAT
GGACGTCCCCACCGTCGGTGATATGGGCAAGTTGCCGGATACCCTGCCGGTCTTCCTCTGGCCCGACGTCCCGTTGAACC
TAGAGACGTTGTGGATCGTCCTGCCTTATGCCTTGGCGCTGACCGTGGTGGGGCTGCTCGAGTCGATGATGACCCAGGGG
ATCGTCGACAACCTGACCGATACGGAGACGGACCGCGACCGCGAGTGCAAGGGGCAGGGCATTGCCAACATCGCCGCCGG
TAGTGTGGGCGGCATGGCCGGCTGCGCGATGATCGGTCAGTCCATCATCAATGTGAAATCCGGTGGCCGGGGGCGGCTGT
CCTCGCTGGTGGCCGGTGTCGTCCTGCTGGTCCTGGTGGTCTTCCTCACCCCGCTGCTGGAGATGATCCCCATGGCCGCC
CTGGTTGCCGTGATGATCATGGTGGCCATCGGTACCTTTAGTTGGCGGTCGCTTCGCGATATGAAGGACCACCCGCTGAG
TACCAACATCGTCATGGTCAGCATGGTGGGCGTGACCGTGTTCACCCACAATCTGGCCATCGGCGTGCTCACCGGCGTGC
TCCTCGCCTCGCTGTTCTTCGCCAACAAGGTCAGTCGCTTTATGTACGTCCGCTCCGACGTGCAGTCGCTGCCCGATGAC
CAGACTCTGCACCGGCGCTACGAGGTGGTCGGCCAAGTCTTCTTCGCCTCCGCCGAGCGCTTCCGGGAGTCCTTCGACTT
CGGCGAGGACCTGGATACGGTCACCATCGACCTGACCCGGGCGCACTTCTGGGACATTACGTCGGTGGCAGCGCTTGACC
GGGTCGTCATAAACTTCCGCCGCGAAGGCGTTGAGGTGGAGATCGTCGGCATGAATGAGGCGACGGCCACCATCGTTGAT
CGCTACGCGGTCCATAACGAGCCGGACGCCGTCGAGCGGCTGATGGGCCACTGA

Upstream 100 bases:

>100_bases
TGTCCTGAGCGCGCCGTCTCTTCGGCGCCGCACGGCAGTCATGTCCTCATGGGCAGCTCGCCACCATCGGGCCATTGGCT
TCACGCAATCAGGGGAAGTG

Downstream 100 bases:

>100_bases
GCACGCAATGGAGTCCGAACGAATGAGCAAAGTCATTGCCAGTGTCGACGGGTCCCGCTCGTCGCCGGCCGTCTGTGATC
ATGCGGTCTGGGCAGCGAAA

Product: sulfate transporter

Products: Proton [Cytoplasm]; SO42- [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 497; Mature: 497

Protein sequence:

>497_residues
MNWDRIQREWFGNVRADVLAGIIVALALIPEAIAFSIMAGVDPQVGLYASFCIAVVIAFTGGRPGMISGATAAMALLMIT
LVKDHGLEYLLFATLLTGVLQIIAGYLRVGQLMRFISNSVMTGFVNALAILIFMAQLPELIDVPWAVYPMVAGGLALIYL
LPYLTRLVPSPLVTIVVLTTIAWFLGMDVPTVGDMGKLPDTLPVFLWPDVPLNLETLWIVLPYALALTVVGLLESMMTQG
IVDNLTDTETDRDRECKGQGIANIAAGSVGGMAGCAMIGQSIINVKSGGRGRLSSLVAGVVLLVLVVFLTPLLEMIPMAA
LVAVMIMVAIGTFSWRSLRDMKDHPLSTNIVMVSMVGVTVFTHNLAIGVLTGVLLASLFFANKVSRFMYVRSDVQSLPDD
QTLHRRYEVVGQVFFASAERFRESFDFGEDLDTVTIDLTRAHFWDITSVAALDRVVINFRREGVEVEIVGMNEATATIVD
RYAVHNEPDAVERLMGH

Sequences:

>Translated_497_residues
MNWDRIQREWFGNVRADVLAGIIVALALIPEAIAFSIMAGVDPQVGLYASFCIAVVIAFTGGRPGMISGATAAMALLMIT
LVKDHGLEYLLFATLLTGVLQIIAGYLRVGQLMRFISNSVMTGFVNALAILIFMAQLPELIDVPWAVYPMVAGGLALIYL
LPYLTRLVPSPLVTIVVLTTIAWFLGMDVPTVGDMGKLPDTLPVFLWPDVPLNLETLWIVLPYALALTVVGLLESMMTQG
IVDNLTDTETDRDRECKGQGIANIAAGSVGGMAGCAMIGQSIINVKSGGRGRLSSLVAGVVLLVLVVFLTPLLEMIPMAA
LVAVMIMVAIGTFSWRSLRDMKDHPLSTNIVMVSMVGVTVFTHNLAIGVLTGVLLASLFFANKVSRFMYVRSDVQSLPDD
QTLHRRYEVVGQVFFASAERFRESFDFGEDLDTVTIDLTRAHFWDITSVAALDRVVINFRREGVEVEIVGMNEATATIVD
RYAVHNEPDAVERLMGH
>Mature_497_residues
MNWDRIQREWFGNVRADVLAGIIVALALIPEAIAFSIMAGVDPQVGLYASFCIAVVIAFTGGRPGMISGATAAMALLMIT
LVKDHGLEYLLFATLLTGVLQIIAGYLRVGQLMRFISNSVMTGFVNALAILIFMAQLPELIDVPWAVYPMVAGGLALIYL
LPYLTRLVPSPLVTIVVLTTIAWFLGMDVPTVGDMGKLPDTLPVFLWPDVPLNLETLWIVLPYALALTVVGLLESMMTQG
IVDNLTDTETDRDRECKGQGIANIAAGSVGGMAGCAMIGQSIINVKSGGRGRLSSLVAGVVLLVLVVFLTPLLEMIPMAA
LVAVMIMVAIGTFSWRSLRDMKDHPLSTNIVMVSMVGVTVFTHNLAIGVLTGVLLASLFFANKVSRFMYVRSDVQSLPDD
QTLHRRYEVVGQVFFASAERFRESFDFGEDLDTVTIDLTRAHFWDITSVAALDRVVINFRREGVEVEIVGMNEATATIVD
RYAVHNEPDAVERLMGH

Specific function: Possible Sulfate Transporter. [C]

COG id: COG0659

COG function: function code P; Sulfate permease and related transporters (MFS superfamily)

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 STAS domain [H]

Homologues:

Organism=Homo sapiens, GI262206105, Length=133, Percent_Identity=36.0902255639098, Blast_Score=79, Evalue=1e-14,
Organism=Homo sapiens, GI262206075, Length=133, Percent_Identity=36.0902255639098, Blast_Score=79, Evalue=1e-14,
Organism=Homo sapiens, GI262206069, Length=133, Percent_Identity=36.0902255639098, Blast_Score=79, Evalue=1e-14,
Organism=Homo sapiens, GI262206063, Length=133, Percent_Identity=36.0902255639098, Blast_Score=79, Evalue=1e-14,
Organism=Homo sapiens, GI94721259, Length=383, Percent_Identity=22.7154046997389, Blast_Score=70, Evalue=3e-12,
Organism=Homo sapiens, GI94721255, Length=383, Percent_Identity=22.7154046997389, Blast_Score=70, Evalue=3e-12,
Organism=Homo sapiens, GI94721253, Length=383, Percent_Identity=22.7154046997389, Blast_Score=70, Evalue=4e-12,
Organism=Homo sapiens, GI94721257, Length=383, Percent_Identity=22.7154046997389, Blast_Score=69, Evalue=7e-12,
Organism=Escherichia coli, GI87081859, Length=537, Percent_Identity=28.3054003724395, Blast_Score=144, Evalue=9e-36,
Organism=Caenorhabditis elegans, GI17566848, Length=553, Percent_Identity=23.1464737793852, Blast_Score=87, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI86564196, Length=435, Percent_Identity=23.2183908045977, Blast_Score=79, Evalue=7e-15,
Organism=Caenorhabditis elegans, GI17562578, Length=398, Percent_Identity=21.608040201005, Blast_Score=67, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6323121, Length=392, Percent_Identity=23.469387755102, Blast_Score=74, Evalue=7e-14,
Organism=Saccharomyces cerevisiae, GI6325260, Length=383, Percent_Identity=24.2819843342037, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI21358633, Length=537, Percent_Identity=21.415270018622, Blast_Score=91, Evalue=2e-18,
Organism=Drosophila melanogaster, GI21358229, Length=128, Percent_Identity=35.9375, Blast_Score=80, Evalue=3e-15,
Organism=Drosophila melanogaster, GI24647160, Length=150, Percent_Identity=28, Blast_Score=77, Evalue=3e-14,
Organism=Drosophila melanogaster, GI21355087, Length=150, Percent_Identity=28, Blast_Score=77, Evalue=3e-14,
Organism=Drosophila melanogaster, GI19922482, Length=415, Percent_Identity=24.0963855421687, Blast_Score=75, Evalue=1e-13,
Organism=Drosophila melanogaster, GI85815873, Length=127, Percent_Identity=37.007874015748, Blast_Score=70, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24651449, Length=127, Percent_Identity=30.7086614173228, Blast_Score=69, Evalue=6e-12,
Organism=Drosophila melanogaster, GI24663084, Length=125, Percent_Identity=33.6, Blast_Score=69, Evalue=7e-12,
Organism=Drosophila melanogaster, GI21357695, Length=125, Percent_Identity=33.6, Blast_Score=69, Evalue=7e-12,
Organism=Drosophila melanogaster, GI24649801, Length=128, Percent_Identity=32.03125, Blast_Score=68, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018045
- InterPro:   IPR002645
- InterPro:   IPR001902
- InterPro:   IPR011547 [H]

Pfam domain/function: PF01740 STAS; PF00916 Sulfate_transp [H]

EC number: NA

Molecular weight: Translated: 54040; Mature: 54040

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: PS50801 STAS ; PS01130 SLC26A

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHCCCCHHHHHHHCC
>Mature Secondary Structure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HHHHCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Proton [Periplasm]; SO42- [Periplasm] [C]

Specific reaction: Proton [Periplasm] + SO42- [Periplasm] = Proton [Cytoplasm] + SO42- [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9274029; 9384377 [H]