| Definition | Halorhodospira halophila SL1 chromosome, complete genome. |
|---|---|
| Accession | NC_008789 |
| Length | 2,678,452 |
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The map label for this gene is ybaR [H]
Identifier: 121998690
GI number: 121998690
Start: 2106791
End: 2108284
Strand: Reverse
Name: ybaR [H]
Synonym: Hhal_1911
Alternate gene names: 121998690
Gene position: 2108284-2106791 (Counterclockwise)
Preceding gene: 121998692
Following gene: 121998689
Centisome position: 78.71
GC content: 63.86
Gene sequence:
>1494_bases ATGAACTGGGATCGGATTCAACGGGAGTGGTTCGGCAACGTGCGGGCCGACGTGCTGGCGGGCATCATCGTTGCGCTGGC GTTGATCCCTGAGGCGATTGCCTTTTCGATCATGGCGGGCGTCGACCCGCAGGTGGGGCTCTACGCCTCGTTCTGCATCG CCGTGGTGATCGCCTTCACCGGCGGCCGGCCCGGCATGATCTCCGGGGCGACGGCGGCGATGGCGCTGCTGATGATCACC CTGGTCAAGGACCACGGGCTGGAGTACCTGCTGTTCGCTACGCTGCTGACCGGCGTGCTGCAGATCATCGCCGGCTACCT GCGGGTCGGGCAGTTGATGCGCTTTATCTCCAACTCGGTGATGACCGGGTTCGTGAACGCCCTGGCGATCCTCATCTTCA TGGCGCAGCTACCCGAGCTGATCGATGTCCCCTGGGCGGTGTACCCCATGGTCGCCGGTGGCCTGGCGCTGATCTATCTG CTCCCCTACCTGACGCGGCTGGTGCCGTCGCCGCTGGTCACCATCGTGGTGCTGACCACGATCGCCTGGTTCCTCGGTAT GGACGTCCCCACCGTCGGTGATATGGGCAAGTTGCCGGATACCCTGCCGGTCTTCCTCTGGCCCGACGTCCCGTTGAACC TAGAGACGTTGTGGATCGTCCTGCCTTATGCCTTGGCGCTGACCGTGGTGGGGCTGCTCGAGTCGATGATGACCCAGGGG ATCGTCGACAACCTGACCGATACGGAGACGGACCGCGACCGCGAGTGCAAGGGGCAGGGCATTGCCAACATCGCCGCCGG TAGTGTGGGCGGCATGGCCGGCTGCGCGATGATCGGTCAGTCCATCATCAATGTGAAATCCGGTGGCCGGGGGCGGCTGT CCTCGCTGGTGGCCGGTGTCGTCCTGCTGGTCCTGGTGGTCTTCCTCACCCCGCTGCTGGAGATGATCCCCATGGCCGCC CTGGTTGCCGTGATGATCATGGTGGCCATCGGTACCTTTAGTTGGCGGTCGCTTCGCGATATGAAGGACCACCCGCTGAG TACCAACATCGTCATGGTCAGCATGGTGGGCGTGACCGTGTTCACCCACAATCTGGCCATCGGCGTGCTCACCGGCGTGC TCCTCGCCTCGCTGTTCTTCGCCAACAAGGTCAGTCGCTTTATGTACGTCCGCTCCGACGTGCAGTCGCTGCCCGATGAC CAGACTCTGCACCGGCGCTACGAGGTGGTCGGCCAAGTCTTCTTCGCCTCCGCCGAGCGCTTCCGGGAGTCCTTCGACTT CGGCGAGGACCTGGATACGGTCACCATCGACCTGACCCGGGCGCACTTCTGGGACATTACGTCGGTGGCAGCGCTTGACC GGGTCGTCATAAACTTCCGCCGCGAAGGCGTTGAGGTGGAGATCGTCGGCATGAATGAGGCGACGGCCACCATCGTTGAT CGCTACGCGGTCCATAACGAGCCGGACGCCGTCGAGCGGCTGATGGGCCACTGA
Upstream 100 bases:
>100_bases TGTCCTGAGCGCGCCGTCTCTTCGGCGCCGCACGGCAGTCATGTCCTCATGGGCAGCTCGCCACCATCGGGCCATTGGCT TCACGCAATCAGGGGAAGTG
Downstream 100 bases:
>100_bases GCACGCAATGGAGTCCGAACGAATGAGCAAAGTCATTGCCAGTGTCGACGGGTCCCGCTCGTCGCCGGCCGTCTGTGATC ATGCGGTCTGGGCAGCGAAA
Product: sulfate transporter
Products: Proton [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 497; Mature: 497
Protein sequence:
>497_residues MNWDRIQREWFGNVRADVLAGIIVALALIPEAIAFSIMAGVDPQVGLYASFCIAVVIAFTGGRPGMISGATAAMALLMIT LVKDHGLEYLLFATLLTGVLQIIAGYLRVGQLMRFISNSVMTGFVNALAILIFMAQLPELIDVPWAVYPMVAGGLALIYL LPYLTRLVPSPLVTIVVLTTIAWFLGMDVPTVGDMGKLPDTLPVFLWPDVPLNLETLWIVLPYALALTVVGLLESMMTQG IVDNLTDTETDRDRECKGQGIANIAAGSVGGMAGCAMIGQSIINVKSGGRGRLSSLVAGVVLLVLVVFLTPLLEMIPMAA LVAVMIMVAIGTFSWRSLRDMKDHPLSTNIVMVSMVGVTVFTHNLAIGVLTGVLLASLFFANKVSRFMYVRSDVQSLPDD QTLHRRYEVVGQVFFASAERFRESFDFGEDLDTVTIDLTRAHFWDITSVAALDRVVINFRREGVEVEIVGMNEATATIVD RYAVHNEPDAVERLMGH
Sequences:
>Translated_497_residues MNWDRIQREWFGNVRADVLAGIIVALALIPEAIAFSIMAGVDPQVGLYASFCIAVVIAFTGGRPGMISGATAAMALLMIT LVKDHGLEYLLFATLLTGVLQIIAGYLRVGQLMRFISNSVMTGFVNALAILIFMAQLPELIDVPWAVYPMVAGGLALIYL LPYLTRLVPSPLVTIVVLTTIAWFLGMDVPTVGDMGKLPDTLPVFLWPDVPLNLETLWIVLPYALALTVVGLLESMMTQG IVDNLTDTETDRDRECKGQGIANIAAGSVGGMAGCAMIGQSIINVKSGGRGRLSSLVAGVVLLVLVVFLTPLLEMIPMAA LVAVMIMVAIGTFSWRSLRDMKDHPLSTNIVMVSMVGVTVFTHNLAIGVLTGVLLASLFFANKVSRFMYVRSDVQSLPDD QTLHRRYEVVGQVFFASAERFRESFDFGEDLDTVTIDLTRAHFWDITSVAALDRVVINFRREGVEVEIVGMNEATATIVD RYAVHNEPDAVERLMGH >Mature_497_residues MNWDRIQREWFGNVRADVLAGIIVALALIPEAIAFSIMAGVDPQVGLYASFCIAVVIAFTGGRPGMISGATAAMALLMIT LVKDHGLEYLLFATLLTGVLQIIAGYLRVGQLMRFISNSVMTGFVNALAILIFMAQLPELIDVPWAVYPMVAGGLALIYL LPYLTRLVPSPLVTIVVLTTIAWFLGMDVPTVGDMGKLPDTLPVFLWPDVPLNLETLWIVLPYALALTVVGLLESMMTQG IVDNLTDTETDRDRECKGQGIANIAAGSVGGMAGCAMIGQSIINVKSGGRGRLSSLVAGVVLLVLVVFLTPLLEMIPMAA LVAVMIMVAIGTFSWRSLRDMKDHPLSTNIVMVSMVGVTVFTHNLAIGVLTGVLLASLFFANKVSRFMYVRSDVQSLPDD QTLHRRYEVVGQVFFASAERFRESFDFGEDLDTVTIDLTRAHFWDITSVAALDRVVINFRREGVEVEIVGMNEATATIVD RYAVHNEPDAVERLMGH
Specific function: Possible Sulfate Transporter. [C]
COG id: COG0659
COG function: function code P; Sulfate permease and related transporters (MFS superfamily)
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 STAS domain [H]
Homologues:
Organism=Homo sapiens, GI262206105, Length=133, Percent_Identity=36.0902255639098, Blast_Score=79, Evalue=1e-14, Organism=Homo sapiens, GI262206075, Length=133, Percent_Identity=36.0902255639098, Blast_Score=79, Evalue=1e-14, Organism=Homo sapiens, GI262206069, Length=133, Percent_Identity=36.0902255639098, Blast_Score=79, Evalue=1e-14, Organism=Homo sapiens, GI262206063, Length=133, Percent_Identity=36.0902255639098, Blast_Score=79, Evalue=1e-14, Organism=Homo sapiens, GI94721259, Length=383, Percent_Identity=22.7154046997389, Blast_Score=70, Evalue=3e-12, Organism=Homo sapiens, GI94721255, Length=383, Percent_Identity=22.7154046997389, Blast_Score=70, Evalue=3e-12, Organism=Homo sapiens, GI94721253, Length=383, Percent_Identity=22.7154046997389, Blast_Score=70, Evalue=4e-12, Organism=Homo sapiens, GI94721257, Length=383, Percent_Identity=22.7154046997389, Blast_Score=69, Evalue=7e-12, Organism=Escherichia coli, GI87081859, Length=537, Percent_Identity=28.3054003724395, Blast_Score=144, Evalue=9e-36, Organism=Caenorhabditis elegans, GI17566848, Length=553, Percent_Identity=23.1464737793852, Blast_Score=87, Evalue=2e-17, Organism=Caenorhabditis elegans, GI86564196, Length=435, Percent_Identity=23.2183908045977, Blast_Score=79, Evalue=7e-15, Organism=Caenorhabditis elegans, GI17562578, Length=398, Percent_Identity=21.608040201005, Blast_Score=67, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6323121, Length=392, Percent_Identity=23.469387755102, Blast_Score=74, Evalue=7e-14, Organism=Saccharomyces cerevisiae, GI6325260, Length=383, Percent_Identity=24.2819843342037, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI21358633, Length=537, Percent_Identity=21.415270018622, Blast_Score=91, Evalue=2e-18, Organism=Drosophila melanogaster, GI21358229, Length=128, Percent_Identity=35.9375, Blast_Score=80, Evalue=3e-15, Organism=Drosophila melanogaster, GI24647160, Length=150, Percent_Identity=28, Blast_Score=77, Evalue=3e-14, Organism=Drosophila melanogaster, GI21355087, Length=150, Percent_Identity=28, Blast_Score=77, Evalue=3e-14, Organism=Drosophila melanogaster, GI19922482, Length=415, Percent_Identity=24.0963855421687, Blast_Score=75, Evalue=1e-13, Organism=Drosophila melanogaster, GI85815873, Length=127, Percent_Identity=37.007874015748, Blast_Score=70, Evalue=3e-12, Organism=Drosophila melanogaster, GI24651449, Length=127, Percent_Identity=30.7086614173228, Blast_Score=69, Evalue=6e-12, Organism=Drosophila melanogaster, GI24663084, Length=125, Percent_Identity=33.6, Blast_Score=69, Evalue=7e-12, Organism=Drosophila melanogaster, GI21357695, Length=125, Percent_Identity=33.6, Blast_Score=69, Evalue=7e-12, Organism=Drosophila melanogaster, GI24649801, Length=128, Percent_Identity=32.03125, Blast_Score=68, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018045 - InterPro: IPR002645 - InterPro: IPR001902 - InterPro: IPR011547 [H]
Pfam domain/function: PF01740 STAS; PF00916 Sulfate_transp [H]
EC number: NA
Molecular weight: Translated: 54040; Mature: 54040
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: PS50801 STAS ; PS01130 SLC26A
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNWDRIQREWFGNVRADVLAGIIVALALIPEAIAFSIMAGVDPQVGLYASFCIAVVIAFT CCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHC GGRPGMISGATAAMALLMITLVKDHGLEYLLFATLLTGVLQIIAGYLRVGQLMRFISNSV CCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MTGFVNALAILIFMAQLPELIDVPWAVYPMVAGGLALIYLLPYLTRLVPSPLVTIVVLTT HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH IAWFLGMDVPTVGDMGKLPDTLPVFLWPDVPLNLETLWIVLPYALALTVVGLLESMMTQG HHHHHCCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH IVDNLTDTETDRDRECKGQGIANIAAGSVGGMAGCAMIGQSIINVKSGGRGRLSSLVAGV HHHCCCCCCCCCCHHHCCCCCHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH VLLVLVVFLTPLLEMIPMAALVAVMIMVAIGTFSWRSLRDMKDHPLSTNIVMVSMVGVTV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCHHHHHHHHHHH FTHNLAIGVLTGVLLASLFFANKVSRFMYVRSDVQSLPDDQTLHRRYEVVGQVFFASAER HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH FRESFDFGEDLDTVTIDLTRAHFWDITSVAALDRVVINFRREGVEVEIVGMNEATATIVD HHHHCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHH RYAVHNEPDAVERLMGH HHHHCCCCHHHHHHHCC >Mature Secondary Structure MNWDRIQREWFGNVRADVLAGIIVALALIPEAIAFSIMAGVDPQVGLYASFCIAVVIAFT CCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHC GGRPGMISGATAAMALLMITLVKDHGLEYLLFATLLTGVLQIIAGYLRVGQLMRFISNSV CCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MTGFVNALAILIFMAQLPELIDVPWAVYPMVAGGLALIYLLPYLTRLVPSPLVTIVVLTT HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH IAWFLGMDVPTVGDMGKLPDTLPVFLWPDVPLNLETLWIVLPYALALTVVGLLESMMTQG HHHHHCCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH IVDNLTDTETDRDRECKGQGIANIAAGSVGGMAGCAMIGQSIINVKSGGRGRLSSLVAGV HHHCCCCCCCCCCHHHCCCCCHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH VLLVLVVFLTPLLEMIPMAALVAVMIMVAIGTFSWRSLRDMKDHPLSTNIVMVSMVGVTV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCHHHHHHHHHHH FTHNLAIGVLTGVLLASLFFANKVSRFMYVRSDVQSLPDDQTLHRRYEVVGQVFFASAER HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH FRESFDFGEDLDTVTIDLTRAHFWDITSVAALDRVVINFRREGVEVEIVGMNEATATIVD HHHHCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHH RYAVHNEPDAVERLMGH HHHHCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; SO42- [Periplasm] [C]
Specific reaction: Proton [Periplasm] + SO42- [Periplasm] = Proton [Cytoplasm] + SO42- [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9274029; 9384377 [H]