| Definition | Halorhodospira halophila SL1 chromosome, complete genome. |
|---|---|
| Accession | NC_008789 |
| Length | 2,678,452 |
Click here to switch to the map view.
The map label for this gene is crcB [H]
Identifier: 121998693
GI number: 121998693
Start: 2109931
End: 2110320
Strand: Reverse
Name: crcB [H]
Synonym: Hhal_1914
Alternate gene names: 121998693
Gene position: 2110320-2109931 (Counterclockwise)
Preceding gene: 121998694
Following gene: 121998692
Centisome position: 78.79
GC content: 70.26
Gene sequence:
>390_bases ATGAGGATCACCCTCTGGGTGGCCGCCGGCAGCGCGCTGGGCGGGGTGAGCCGCTACGGCGTCGATGGGGTCATGGTGGC GGCCGGCTGGGTCGCCTTCCCCTGGGGCACGCTGTTGGTGAACACGATCGGCTCGCTGTTGATCGGTATCGTGGCCGCCT GGGCGGCGTCGGATCCGGGCGAGCGGGCGTTACCCGTCCACTGGCGGCAGTTCGCCGTGAACGGCTTCTGCGGCGGGTTT ACCACGTTCTCGATCTTCAACCTGGAGACCCTGGCGCTCCTGGAACGGGCCCCCGCGTGGGCCGGCGCCAACGTGCTGGC CACCACGGTCCTCTGCCTGGGAGCGGTGGCGATCGGTTACGCTGTGACGCAGCGACGGCTCGGTGGCTGA
Upstream 100 bases:
>100_bases GGCCCCGGGCGGTCGGTAACGTCTTCGCCACCCTGGCGCTGACTCTGTCCGGCGCCTGGCTCGGGCTGCAGGCGGGTGCG TTGATCCCGGGGGGCGGCGT
Downstream 100 bases:
>100_bases TCAGCGGCCGTCGCGCTGAGACCGTTACCGAGGCAATCTGGGGGCGCATCATGAGAATCTGGGTCGACGCGGACGCCTGT CCGGGAGCCATCAAGGAGAT
Product: CrcB protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 129; Mature: 129
Protein sequence:
>129_residues MRITLWVAAGSALGGVSRYGVDGVMVAAGWVAFPWGTLLVNTIGSLLIGIVAAWAASDPGERALPVHWRQFAVNGFCGGF TTFSIFNLETLALLERAPAWAGANVLATTVLCLGAVAIGYAVTQRRLGG
Sequences:
>Translated_129_residues MRITLWVAAGSALGGVSRYGVDGVMVAAGWVAFPWGTLLVNTIGSLLIGIVAAWAASDPGERALPVHWRQFAVNGFCGGF TTFSIFNLETLALLERAPAWAGANVLATTVLCLGAVAIGYAVTQRRLGG >Mature_129_residues MRITLWVAAGSALGGVSRYGVDGVMVAAGWVAFPWGTLLVNTIGSLLIGIVAAWAASDPGERALPVHWRQFAVNGFCGGF TTFSIFNLETLALLERAPAWAGANVLATTVLCLGAVAIGYAVTQRRLGG
Specific function: Not Known. Overproduction Leads To Camphor Resistance And Chromosome Condensation; Deletion Increases Sensibility To Nucleoid Decondensation. Probably Interacts With The Heat-Shock Protein Cspe, Possibly Providing A Way To Anchor The Chromosome To The Mem
COG id: COG0239
COG function: function code D; Integral membrane protein possibly involved in chromosome condensation
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CrcB family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003691 [H]
Pfam domain/function: PF02537 CRCB [H]
EC number: NA
Molecular weight: Translated: 13392; Mature: 13392
Theoretical pI: Translated: 8.78; Mature: 8.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRITLWVAAGSALGGVSRYGVDGVMVAAGWVAFPWGTLLVNTIGSLLIGIVAAWAASDPG CEEEEEEECCCHHCCHHHHCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC ERALPVHWRQFAVNGFCGGFTTFSIFNLETLALLERAPAWAGANVLATTVLCLGAVAIGY CCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH AVTQRRLGG HHHHHHCCC >Mature Secondary Structure MRITLWVAAGSALGGVSRYGVDGVMVAAGWVAFPWGTLLVNTIGSLLIGIVAAWAASDPG CEEEEEEECCCHHCCHHHHCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC ERALPVHWRQFAVNGFCGGFTTFSIFNLETLALLERAPAWAGANVLATTVLCLGAVAIGY CCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH AVTQRRLGG HHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA