The gene/protein map for NC_008789 is currently unavailable.
Definition Halorhodospira halophila SL1 chromosome, complete genome.
Accession NC_008789
Length 2,678,452

Click here to switch to the map view.

The map label for this gene is 121998466

Identifier: 121998466

GI number: 121998466

Start: 1842073

End: 1842654

Strand: Reverse

Name: 121998466

Synonym: Hhal_1687

Alternate gene names: NA

Gene position: 1842654-1842073 (Counterclockwise)

Preceding gene: 121998467

Following gene: 121998465

Centisome position: 68.8

GC content: 64.78

Gene sequence:

>582_bases
ATGATTCGCACGACGACGGCGGCGCTCCTCGCGCTGCTCATTGCCGCAGCCCCGCTGCAGGTCTCGCTGGCTCAGGATGG
CGAGCAGCAGGCCCCCGGGGCCCAGGACGCGGAGTTGATGGAGGCGCAGCAGCGGCTCCAGGAGCTGCAAAGGCAGCTGG
GGCAGATCCAGCAGGAAACCTTCGAGGCCAGTGACGAACTGCAGGAGAAGCAGCGTCGGCTGGAGGAGCGCGCTACCGCC
AAGATGGAAGATCTTGGCTACGACCCTGAGCGCCACTATGCGCGCATGCAGGAGATCTACGAGCGCTTCGACGCCGGGGA
TGTCTCTGAAGAGGAACAGCAGGAGCTGGCCGAGGAGTTCCACGAGGCGCAGATGCAGCTCCAGCAGGAGCAGCAGGAAG
CCATGCGCGATGACGACTTCCGCGAGAGCATGGAGCGCGACATGCGCGAGTTCCAAGAGGACCTGCTGGCCGCAATGGAG
GAAGACTATCCGGAGACGGCCGAGCTCATGTCCGAACTGGAGGCGCTCCAGCAGCGGGTGCAGGAAGGTATGCAGCAACA
GGTCCCTGAGGGCCTGGAGTAG

Upstream 100 bases:

>100_bases
CCTGGGATAGAGGTGCGCCGTCGGCGTCGGGTGCTAACATAGGCCGGCGCGGTAGCGACCTGGCCGCTTCCGTGGTGGGA
ATAGCTAAGGGAGTTCACCA

Downstream 100 bases:

>100_bases
CCGGGGGGTTCAGTCCCCGGACGGAGCGGGCGGGGTGACCGGGTGCGGTCACTCCGCCTTTTTTGTTTGGGCCATGGCGG
CGCGATGGCCGCCCGGGAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 193; Mature: 193

Protein sequence:

>193_residues
MIRTTTAALLALLIAAAPLQVSLAQDGEQQAPGAQDAELMEAQQRLQELQRQLGQIQQETFEASDELQEKQRRLEERATA
KMEDLGYDPERHYARMQEIYERFDAGDVSEEEQQELAEEFHEAQMQLQQEQQEAMRDDDFRESMERDMREFQEDLLAAME
EDYPETAELMSELEALQQRVQEGMQQQVPEGLE

Sequences:

>Translated_193_residues
MIRTTTAALLALLIAAAPLQVSLAQDGEQQAPGAQDAELMEAQQRLQELQRQLGQIQQETFEASDELQEKQRRLEERATA
KMEDLGYDPERHYARMQEIYERFDAGDVSEEEQQELAEEFHEAQMQLQQEQQEAMRDDDFRESMERDMREFQEDLLAAME
EDYPETAELMSELEALQQRVQEGMQQQVPEGLE
>Mature_193_residues
MIRTTTAALLALLIAAAPLQVSLAQDGEQQAPGAQDAELMEAQQRLQELQRQLGQIQQETFEASDELQEKQRRLEERATA
KMEDLGYDPERHYARMQEIYERFDAGDVSEEEQQELAEEFHEAQMQLQQEQQEAMRDDDFRESMERDMREFQEDLLAAME
EDYPETAELMSELEALQQRVQEGMQQQVPEGLE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22471; Mature: 22471

Theoretical pI: Translated: 3.82; Mature: 3.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.7 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRTTTAALLALLIAAAPLQVSLAQDGEQQAPGAQDAELMEAQQRLQELQRQLGQIQQET
CCCHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
FEASDELQEKQRRLEERATAKMEDLGYDPERHYARMQEIYERFDAGDVSEEEQQELAEEF
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
HEAQMQLQQEQQEAMRDDDFRESMERDMREFQEDLLAAMEEDYPETAELMSELEALQQRV
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
QEGMQQQVPEGLE
HHHHHHHCCCCCC
>Mature Secondary Structure
MIRTTTAALLALLIAAAPLQVSLAQDGEQQAPGAQDAELMEAQQRLQELQRQLGQIQQET
CCCHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
FEASDELQEKQRRLEERATAKMEDLGYDPERHYARMQEIYERFDAGDVSEEEQQELAEEF
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
HEAQMQLQQEQQEAMRDDDFRESMERDMREFQEDLLAAMEEDYPETAELMSELEALQQRV
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
QEGMQQQVPEGLE
HHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA