| Definition | Halorhodospira halophila SL1 chromosome, complete genome. |
|---|---|
| Accession | NC_008789 |
| Length | 2,678,452 |
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The map label for this gene is yqjG [H]
Identifier: 121998465
GI number: 121998465
Start: 1841014
End: 1841967
Strand: Reverse
Name: yqjG [H]
Synonym: Hhal_1686
Alternate gene names: 121998465
Gene position: 1841967-1841014 (Counterclockwise)
Preceding gene: 121998466
Following gene: 121998461
Centisome position: 68.77
GC content: 64.26
Gene sequence:
>954_bases ATGGGCTTGCTGGTCGATGGGCAATGGACGCAAGAGTCGTACAAGCGCGATGAGGCCGGGCGCTTTCAGCGTGACACGAG TCGTTTCCGGGACTGGATCGAGCCGGGCGGGCGCTTCGCGCCTGAGGCGGGGCGTTACCACGTCTACGTCTCACTGGCGT GTCCCTGGGCTCATCGGGTGCTGATCGCCCGCCGGCTGAAGGGCCTGGAGCCGGTGATCTCGGTGTCGGTGGTCCATCCG CTGATGCTGGACAACGGTTGGGAACTGAGCGACGACTTCCCCGGTGCCACCGGTGACCCAATCCACGGGGCCCGTTACCT CCACCAGATCTATACCGCTGCCGAGCCCCGAGCCAATGGTCGAGTCACCGTGCCGGCCCTGTGGGACTGTCGGGAGGGCA CGCTGGTCAACAACGAGTCCCGCGACCTCCTGCGGATGTTCAATCACCATTTCAGCCCGCTGGCAGGCACGGACCTGGAC CTGGCCCCGGCAGATGATATCGAGGCGGTGGATGCGACCATCGACGCGATCTACGAGCCGATCAACAACGGCGTCTACCG CTGCGGTTTTGCCGGCAGTCAGCAGGCGTACGAAGAGGCCGCCGATACCCTCTACGCCGCCCTGGATCACTGGGAGGCGG TGTTGGGCGGGCAGCGCTATCTATGCGGCGATCGTCTCACCGAGGCGGATATCTGCCTCTATACCACGCTGATCCGCTTC GATGCCGTCTACGCCGTGCACTTCAAGTGCTCGCAACGCCAGATCCGCGAGTATCCGAACCTGATGGGGTATCTGCGCGA GCTCTACCAGATGCCGGCTTTCCGGGAGACCACCGACTTCGTGCATATCCGCCACCACTATTTCCGCAGTCACGCCTTCC TGAACCCTGCGGGGCTGGTCGCTCGGATGCCGCAGTTGGATCTCGATGCACCCCACGGTCGGGACGCCCTGTGA
Upstream 100 bases:
>100_bases GGGTTCAGTCCCCGGACGGAGCGGGCGGGGTGACCGGGTGCGGTCACTCCGCCTTTTTTGTTTGGGCCATGGCGGCGCGA TGGCCGCCCGGGAGAGGGCA
Downstream 100 bases:
>100_bases TCGGGCAGGGGGAGTCTGGAGAGGGCCCCCGGCGCGGTCGCGTCGGGGGCGGCCGTGGCTCGGGTAGGCAGGGCCTCCCA TGCTGCCTACGCGATGAGGG
Product: glutathione S-transferase domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 317; Mature: 316
Protein sequence:
>317_residues MGLLVDGQWTQESYKRDEAGRFQRDTSRFRDWIEPGGRFAPEAGRYHVYVSLACPWAHRVLIARRLKGLEPVISVSVVHP LMLDNGWELSDDFPGATGDPIHGARYLHQIYTAAEPRANGRVTVPALWDCREGTLVNNESRDLLRMFNHHFSPLAGTDLD LAPADDIEAVDATIDAIYEPINNGVYRCGFAGSQQAYEEAADTLYAALDHWEAVLGGQRYLCGDRLTEADICLYTTLIRF DAVYAVHFKCSQRQIREYPNLMGYLRELYQMPAFRETTDFVHIRHHYFRSHAFLNPAGLVARMPQLDLDAPHGRDAL
Sequences:
>Translated_317_residues MGLLVDGQWTQESYKRDEAGRFQRDTSRFRDWIEPGGRFAPEAGRYHVYVSLACPWAHRVLIARRLKGLEPVISVSVVHP LMLDNGWELSDDFPGATGDPIHGARYLHQIYTAAEPRANGRVTVPALWDCREGTLVNNESRDLLRMFNHHFSPLAGTDLD LAPADDIEAVDATIDAIYEPINNGVYRCGFAGSQQAYEEAADTLYAALDHWEAVLGGQRYLCGDRLTEADICLYTTLIRF DAVYAVHFKCSQRQIREYPNLMGYLRELYQMPAFRETTDFVHIRHHYFRSHAFLNPAGLVARMPQLDLDAPHGRDAL >Mature_316_residues GLLVDGQWTQESYKRDEAGRFQRDTSRFRDWIEPGGRFAPEAGRYHVYVSLACPWAHRVLIARRLKGLEPVISVSVVHPL MLDNGWELSDDFPGATGDPIHGARYLHQIYTAAEPRANGRVTVPALWDCREGTLVNNESRDLLRMFNHHFSPLAGTDLDL APADDIEAVDATIDAIYEPINNGVYRCGFAGSQQAYEEAADTLYAALDHWEAVLGGQRYLCGDRLTEADICLYTTLIRFD AVYAVHFKCSQRQIREYPNLMGYLRELYQMPAFRETTDFVHIRHHYFRSHAFLNPAGLVARMPQLDLDAPHGRDAL
Specific function: Unknown
COG id: COG0435
COG function: function code O; Predicted glutathione S-transferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 GST C-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI1789489, Length=325, Percent_Identity=51.6923076923077, Blast_Score=346, Evalue=9e-97, Organism=Saccharomyces cerevisiae, GI6322929, Length=357, Percent_Identity=37.5350140056022, Blast_Score=214, Evalue=1e-56, Organism=Saccharomyces cerevisiae, GI6323906, Length=365, Percent_Identity=33.1506849315069, Blast_Score=186, Evalue=6e-48, Organism=Saccharomyces cerevisiae, GI6321593, Length=338, Percent_Identity=33.7278106508876, Blast_Score=169, Evalue=5e-43,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010987 - InterPro: IPR017933 - InterPro: IPR004046 - InterPro: IPR016639 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00043 GST_C [H]
EC number: NA
Molecular weight: Translated: 36011; Mature: 35880
Theoretical pI: Translated: 5.85; Mature: 5.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLLVDGQWTQESYKRDEAGRFQRDTSRFRDWIEPGGRFAPEAGRYHVYVSLACPWAHRV CCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCHHHHH LIARRLKGLEPVISVSVVHPLMLDNGWELSDDFPGATGDPIHGARYLHQIYTAAEPRANG HHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC RVTVPALWDCREGTLVNNESRDLLRMFNHHFSPLAGTDLDLAPADDIEAVDATIDAIYEP CEEECEEEECCCCCEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH INNGVYRCGFAGSQQAYEEAADTLYAALDHWEAVLGGQRYLCGDRLTEADICLYTTLIRF HCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHH DAVYAVHFKCSQRQIREYPNLMGYLRELYQMPAFRETTDFVHIRHHYFRSHAFLNPAGLV HHHEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHH ARMPQLDLDAPHGRDAL HHCCCCCCCCCCCCCCC >Mature Secondary Structure GLLVDGQWTQESYKRDEAGRFQRDTSRFRDWIEPGGRFAPEAGRYHVYVSLACPWAHRV CEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCHHHHH LIARRLKGLEPVISVSVVHPLMLDNGWELSDDFPGATGDPIHGARYLHQIYTAAEPRANG HHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC RVTVPALWDCREGTLVNNESRDLLRMFNHHFSPLAGTDLDLAPADDIEAVDATIDAIYEP CEEECEEEECCCCCEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH INNGVYRCGFAGSQQAYEEAADTLYAALDHWEAVLGGQRYLCGDRLTEADICLYTTLIRF HCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHH DAVYAVHFKCSQRQIREYPNLMGYLRELYQMPAFRETTDFVHIRHHYFRSHAFLNPAGLV HHHEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHH ARMPQLDLDAPHGRDAL HHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]