| Definition | Halorhodospira halophila SL1 chromosome, complete genome. |
|---|---|
| Accession | NC_008789 |
| Length | 2,678,452 |
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The map label for this gene is bchO [H]
Identifier: 121998399
GI number: 121998399
Start: 1767191
End: 1768102
Strand: Reverse
Name: bchO [H]
Synonym: Hhal_1620
Alternate gene names: 121998399
Gene position: 1768102-1767191 (Counterclockwise)
Preceding gene: 121998400
Following gene: 121998398
Centisome position: 66.01
GC content: 70.18
Gene sequence:
>912_bases ATGGGAGCGGCGTTGGCCTGGGAGCGGGACGCTGCCGGGTGGCCGAACCACGAGGCCAGTCGGTTCGTCCAAGCGGGCGG GTTGCGTTGGCACGTGCAAGTCTACGGCGAGGGGCCGCCCGCGCTGCTGCTCCACGGCAGTGCCGCCTCGGTGCACTCCT GGCGCGACTTCGGGCCGCGGCTTGCCGAGCACTACACCGTGGTGGCCCTGGATCTGCCCGGACACGGGTTCAGTGCAGCG CCGTCGCGCCGCCTGCAGACCCTCTCCGGTGCGGGCGAGGGGATTGCCGAGCTTCTGGACGCACTGGGGGTCGCGCCCCG GGTGGCCATTGGCCATTCGGTGGGTGCGGCCCTGTTGGCCCGCATGGCCCTCGATGGTCGCATCCAGCCCGATGTGCTGA TCAGCATCAATGGGGCCTTCCTGCCGTTCTCGGGTATCGCCGGTCACCTGTTTCCCACCACGGCGCGCCTGCTGACCTAC AACCCACTGGTCCCCTTCTGGCTCGCCTTCCGGGCCCGTAACCGCGTATTCCTGGCCGATGTCCTGGCGCGTACCGGCTC GCGGATCGACGAGGCCGGCATCGATCTCTATCAGCGATTGGCAACCCATCCGGGTCACGTCGCCGCGGCGCTGGGCATGA TGGCGCGCACCCACGACGGCCTTTACGCCCTGATGGAGGATCTGCCGCAGCTGACTGTGCCGCTGGTCCTGTTCGCGGCC AGCGGGGATCGCACCGTACCTCCGGCGCAGGCCGAGCGGGTGCGCCTGCGGCTGCCGTCGGCGCGCCTGGAAATCCTCCA GGGTCTCGGGCACCTGGCCCACGAGGAAGCGCCGGATCGGGTGACCGAGCAGGTCCTGGCCGCCATCCGCGCCACCGCGC CAAAAGGTCGCGGTGGCGCGGATATTCGTTGA
Upstream 100 bases:
>100_bases GGGAGCAGACTATCTGCCGCTGCCGCGAGCTGATGCCTCTTCGATCAGTTCGGCAGTGCAGGCAGTGACCGGTACGGGGC GCTAGACCGGGAGGAAGGTC
Downstream 100 bases:
>100_bases CATAGTCCCGACCGTACTTAAGGTGAAACCCATGCGAATGAATCCTGATGCCCCTGCTCCCGCTGTCGGTGGCCAGTCGC CCCACGCCGTGGTTATCGGT
Product: alpha/beta hydrolase fold
Products: NA
Alternate protein names: Mg-protoporphyrin IX chelatase [H]
Number of amino acids: Translated: 303; Mature: 302
Protein sequence:
>303_residues MGAALAWERDAAGWPNHEASRFVQAGGLRWHVQVYGEGPPALLLHGSAASVHSWRDFGPRLAEHYTVVALDLPGHGFSAA PSRRLQTLSGAGEGIAELLDALGVAPRVAIGHSVGAALLARMALDGRIQPDVLISINGAFLPFSGIAGHLFPTTARLLTY NPLVPFWLAFRARNRVFLADVLARTGSRIDEAGIDLYQRLATHPGHVAAALGMMARTHDGLYALMEDLPQLTVPLVLFAA SGDRTVPPAQAERVRLRLPSARLEILQGLGHLAHEEAPDRVTEQVLAAIRATAPKGRGGADIR
Sequences:
>Translated_303_residues MGAALAWERDAAGWPNHEASRFVQAGGLRWHVQVYGEGPPALLLHGSAASVHSWRDFGPRLAEHYTVVALDLPGHGFSAA PSRRLQTLSGAGEGIAELLDALGVAPRVAIGHSVGAALLARMALDGRIQPDVLISINGAFLPFSGIAGHLFPTTARLLTY NPLVPFWLAFRARNRVFLADVLARTGSRIDEAGIDLYQRLATHPGHVAAALGMMARTHDGLYALMEDLPQLTVPLVLFAA SGDRTVPPAQAERVRLRLPSARLEILQGLGHLAHEEAPDRVTEQVLAAIRATAPKGRGGADIR >Mature_302_residues GAALAWERDAAGWPNHEASRFVQAGGLRWHVQVYGEGPPALLLHGSAASVHSWRDFGPRLAEHYTVVALDLPGHGFSAAP SRRLQTLSGAGEGIAELLDALGVAPRVAIGHSVGAALLARMALDGRIQPDVLISINGAFLPFSGIAGHLFPTTARLLTYN PLVPFWLAFRARNRVFLADVLARTGSRIDEAGIDLYQRLATHPGHVAAALGMMARTHDGLYALMEDLPQLTVPLVLFAAS GDRTVPPAQAERVRLRLPSARLEILQGLGHLAHEEAPDRVTEQVLAAIRATAPKGRGGADIR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the lipase/esterase LIP3/BchO family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR017497 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: =6.6.1.1 [H]
Molecular weight: Translated: 32327; Mature: 32195
Theoretical pI: Translated: 8.95; Mature: 8.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGAALAWERDAAGWPNHEASRFVQAGGLRWHVQVYGEGPPALLLHGSAASVHSWRDFGPR CCCCCCCCCCCCCCCCHHHHHHHHHCCEEEEEEEEECCCCEEEEECCCCCHHHHHHHCHH LAEHYTVVALDLPGHGFSAAPSRRLQTLSGAGEGIAELLDALGVAPRVAIGHSVGAALLA HHCCEEEEEEECCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHH RMALDGRIQPDVLISINGAFLPFSGIAGHLFPTTARLLTYNPLVPFWLAFRARNRVFLAD HHHHCCCCCCCEEEEECCCEECCCCCCCHHHHHHHHHEECCCHHHHHHHHHHCCCCHHHH VLARTGSRIDEAGIDLYQRLATHPGHVAAALGMMARTHDGLYALMEDLPQLTVPLVLFAA HHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCEEEEEC SGDRTVPPAQAERVRLRLPSARLEILQGLGHLAHEEAPDRVTEQVLAAIRATAPKGRGGA CCCCCCCCCHHHHEEEECCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCC DIR CCC >Mature Secondary Structure GAALAWERDAAGWPNHEASRFVQAGGLRWHVQVYGEGPPALLLHGSAASVHSWRDFGPR CCCCCCCCCCCCCCCHHHHHHHHHCCEEEEEEEEECCCCEEEEECCCCCHHHHHHHCHH LAEHYTVVALDLPGHGFSAAPSRRLQTLSGAGEGIAELLDALGVAPRVAIGHSVGAALLA HHCCEEEEEEECCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHH RMALDGRIQPDVLISINGAFLPFSGIAGHLFPTTARLLTYNPLVPFWLAFRARNRVFLAD HHHHCCCCCCCEEEEECCCEECCCCCCCHHHHHHHHHEECCCHHHHHHHHHHCCCCHHHH VLARTGSRIDEAGIDLYQRLATHPGHVAAALGMMARTHDGLYALMEDLPQLTVPLVLFAA HHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCEEEEEC SGDRTVPPAQAERVRLRLPSARLEILQGLGHLAHEEAPDRVTEQVLAAIRATAPKGRGGA CCCCCCCCCHHHHEEEECCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCC DIR CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA