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The map label for this gene is bchD

Identifier: 121998400

GI number: 121998400

Start: 1768118

End: 1769995

Strand: Reverse

Name: bchD

Synonym: Hhal_1621

Alternate gene names: 121998400

Gene position: 1769995-1768118 (Counterclockwise)

Preceding gene: 121998401

Following gene: 121998399

Centisome position: 66.08

GC content: 69.97

Gene sequence:

>1878_bases
ATGAGCGCTGCGCTCGATTACAACAGTGCCGAGTCGGCCTGGGAGGATGCGGCGACTGCGGCGGCGTTGCTGGCGATCGA
CCCGCCCGGTGTGGGGGGCGTCTGCCTGCGTTCACTGCCCGGGCCGGTGCGCGACCGCTGGGTCCAGATCGCGCGTGAGC
TGCTGCCCGCAGAGACGCCGTGGCGCCGCATCCCGATCAATATCTCAGATAGTCGCCTGCTTGGTGGCCTGGATTTGACG
GCCACGCTCCGCTCCGGCCGGCCGGTGGTGGAGCGGGGTGTGCTGGCCGAGGTCGATGGCGGCGTGGCCGTTTTGGCCAT
GGCCGAGCGCATCGCCCCGGCCACCGCTGGCAAGCTCGGGGCGGTGCTCGATAACGGCGAGGTCCGGCTGGAGAGGGACG
GCCTGGCCGAGCGGATGACGAGCCGCTTCGGGGTGATCGCCCTGGATGAGGGCGCCGAAGAAGACGAGCGGCCGGTGGGG
CCGCTTCGCGATCGGCTGGGGTGCCACCTCGATCTCAACGGGATCCCGGTGCATGTCGCCGGCGGCTGTGAGTACACGGC
CGATGACGTGGCGGCGGCGCGGGACCGTCTGGACCAGGTCCATTGCTCCGATGAGTTGGCCGAGGCCCTGTGTGCCGGTG
GGCTGGCGCTGGGTATCGGCTCATTGCGGGCCCCGCTGCAGGCATTGCGTGCTGCCCGGGCGGCAGCTGCACTGGCCGGG
CGGACGGAAGTGACCCAGGAGGACGTGGCGCTCGCAACGCGACTGATCCTGGTGCCGCGGGCCACCCGCATCCCGGAGAT
GCAACAGCCGGAAGAAGAACAGCCCGAGGAGCAGCAGGAGACCCAGGAGACTGAGCAGCAGGAGCAGGAAGAGCCGCCCC
CGCCGCCGGAGCAGGAGGACGACGAGCGTCCTGATGAGGAGGATGGCGGTGAGCAAGACGAAGACGATCAGGGGCAGGAC
GAGGATGAGGACGAGGAGCAGGCGCCGGCGGAAATCCCGGCAGAGCTCGTGCTGGATGCTGCAAGAGCGGTGCTCCCCGA
TAACCTGCTCCAGCAGATGAAAATTCGCGAGCTGGCTCAGCGCAACCGGTCGCAGACGCCGGGGCGTGCCGGTGCCCTGC
AGCAGGGGGGCGGGCGCGGCCGCCCGGCCGGGGTGCGAGCAGGCAACCCGGGTGGGGGTGCGCGACTGAATGTGGTTGAG
ACGCTGCGCACGGCGGCTCCTTGGCAGCCGCTGCGGCGGGAGCACGATCAGACGGGGCGGCGGGTCATTGTCCGCCCCGA
GGATTTCCGGGTTACCCGCTTCAAGCAGCGCAGTCAGACGACGACGATCTTCGCGGTGGATGCCTCGGGATCTTCGGCCA
TGCACCGGCTTTCGGAGGCCAAGGGTGCGGTGGAGCTGCTGTTGGCCGAGTGCTATGTGCGCCGGGATGAGGTGGCGCTG
GTTGCCTTCCGGGGGCGGGGGGCCGAAGTGCTGCTGCCTCCGACGCGTTCCCTGACCCGGGCCAAGAAGGGGCTTGCCGG
GTTGCCGGGGGGAGGCGGGACGCCACTGGCTGCGGGCATCGATACCGCGCGGCAGCTCACCGGCGAAGTGCGCCGCAAGG
GAGCCACCCCGGTGTTGATCCTGCTCACCGACGGCCGTGCCAATGTCACCCGGGAAGGCCTCGGTGGCCGCGACAAGGCG
CAGCAGGAGGCCACCGAGGCCGCCCGTGCCATCCGCGTGATGGGGATCCGGGCATTGGTGGTGGATACCTCGCCGCGACC
GCGTCCGATGGGCCGTGAGTTAGCCGAAGCGATGGGAGCAGACTATCTGCCGCTGCCGCGAGCTGATGCCTCTTCGATCA
GTTCGGCAGTGCAGGCAGTGACCGGTACGGGGCGCTAG

Upstream 100 bases:

>100_bases
TGGCTAGCGTGGCCTTGCGCCACCGGCTTCGCCGCGATCCCCTCGACGAGTCCGGGTCCACCACCCGGGTCCAGCGAGCC
GTGGAGGAGCACCTGCCTGC

Downstream 100 bases:

>100_bases
ACCGGGAGGAAGGTCATGGGAGCGGCGTTGGCCTGGGAGCGGGACGCTGCCGGGTGGCCGAACCACGAGGCCAGTCGGTT
CGTCCAAGCGGGCGGGTTGC

Product: magnesium chelatase subunit D

Products: NA

Alternate protein names: Mg-chelatase subunit D; Mg-protoporphyrin IX chelatase [H]

Number of amino acids: Translated: 625; Mature: 624

Protein sequence:

>625_residues
MSAALDYNSAESAWEDAATAAALLAIDPPGVGGVCLRSLPGPVRDRWVQIARELLPAETPWRRIPINISDSRLLGGLDLT
ATLRSGRPVVERGVLAEVDGGVAVLAMAERIAPATAGKLGAVLDNGEVRLERDGLAERMTSRFGVIALDEGAEEDERPVG
PLRDRLGCHLDLNGIPVHVAGGCEYTADDVAAARDRLDQVHCSDELAEALCAGGLALGIGSLRAPLQALRAARAAAALAG
RTEVTQEDVALATRLILVPRATRIPEMQQPEEEQPEEQQETQETEQQEQEEPPPPPEQEDDERPDEEDGGEQDEDDQGQD
EDEDEEQAPAEIPAELVLDAARAVLPDNLLQQMKIRELAQRNRSQTPGRAGALQQGGGRGRPAGVRAGNPGGGARLNVVE
TLRTAAPWQPLRREHDQTGRRVIVRPEDFRVTRFKQRSQTTTIFAVDASGSSAMHRLSEAKGAVELLLAECYVRRDEVAL
VAFRGRGAEVLLPPTRSLTRAKKGLAGLPGGGGTPLAAGIDTARQLTGEVRRKGATPVLILLTDGRANVTREGLGGRDKA
QQEATEAARAIRVMGIRALVVDTSPRPRPMGRELAEAMGADYLPLPRADASSISSAVQAVTGTGR

Sequences:

>Translated_625_residues
MSAALDYNSAESAWEDAATAAALLAIDPPGVGGVCLRSLPGPVRDRWVQIARELLPAETPWRRIPINISDSRLLGGLDLT
ATLRSGRPVVERGVLAEVDGGVAVLAMAERIAPATAGKLGAVLDNGEVRLERDGLAERMTSRFGVIALDEGAEEDERPVG
PLRDRLGCHLDLNGIPVHVAGGCEYTADDVAAARDRLDQVHCSDELAEALCAGGLALGIGSLRAPLQALRAARAAAALAG
RTEVTQEDVALATRLILVPRATRIPEMQQPEEEQPEEQQETQETEQQEQEEPPPPPEQEDDERPDEEDGGEQDEDDQGQD
EDEDEEQAPAEIPAELVLDAARAVLPDNLLQQMKIRELAQRNRSQTPGRAGALQQGGGRGRPAGVRAGNPGGGARLNVVE
TLRTAAPWQPLRREHDQTGRRVIVRPEDFRVTRFKQRSQTTTIFAVDASGSSAMHRLSEAKGAVELLLAECYVRRDEVAL
VAFRGRGAEVLLPPTRSLTRAKKGLAGLPGGGGTPLAAGIDTARQLTGEVRRKGATPVLILLTDGRANVTREGLGGRDKA
QQEATEAARAIRVMGIRALVVDTSPRPRPMGRELAEAMGADYLPLPRADASSISSAVQAVTGTGR
>Mature_624_residues
SAALDYNSAESAWEDAATAAALLAIDPPGVGGVCLRSLPGPVRDRWVQIARELLPAETPWRRIPINISDSRLLGGLDLTA
TLRSGRPVVERGVLAEVDGGVAVLAMAERIAPATAGKLGAVLDNGEVRLERDGLAERMTSRFGVIALDEGAEEDERPVGP
LRDRLGCHLDLNGIPVHVAGGCEYTADDVAAARDRLDQVHCSDELAEALCAGGLALGIGSLRAPLQALRAARAAAALAGR
TEVTQEDVALATRLILVPRATRIPEMQQPEEEQPEEQQETQETEQQEQEEPPPPPEQEDDERPDEEDGGEQDEDDQGQDE
DEDEEQAPAEIPAELVLDAARAVLPDNLLQQMKIRELAQRNRSQTPGRAGALQQGGGRGRPAGVRAGNPGGGARLNVVET
LRTAAPWQPLRREHDQTGRRVIVRPEDFRVTRFKQRSQTTTIFAVDASGSSAMHRLSEAKGAVELLLAECYVRRDEVALV
AFRGRGAEVLLPPTRSLTRAKKGLAGLPGGGGTPLAAGIDTARQLTGEVRRKGATPVLILLTDGRANVTREGLGGRDKAQ
QEATEAARAIRVMGIRALVVDTSPRPRPMGRELAEAMGADYLPLPRADASSISSAVQAVTGTGR

Specific function: Involved in bacteriochlorophyll biosynthesis; introduces a magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX [H]

COG id: COG1240

COG function: function code H; Mg-chelatase subunit ChlD

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 VWFA domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011776
- InterPro:   IPR002035 [H]

Pfam domain/function: PF00092 VWA [H]

EC number: =6.6.1.1 [H]

Molecular weight: Translated: 66653; Mature: 66521

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: PS50234 VWFA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAALDYNSAESAWEDAATAAALLAIDPPGVGGVCLRSLPGPVRDRWVQIARELLPAETP
CCCCCCCCCHHHHHHHHHHHEEEEEECCCCCCHHHHHHCCCHHHHHHHHHHHHHCCCCCC
WRRIPINISDSRLLGGLDLTATLRSGRPVVERGVLAEVDGGVAVLAMAERIAPATAGKLG
CCEECCCCCCCCEECCCCCEEECCCCCCHHHCCCEEECCCCCHHHHHHHHHCCHHCCCCC
AVLDNGEVRLERDGLAERMTSRFGVIALDEGAEEDERPVGPLRDRLGCHLDLNGIPVHVA
EEECCCCEEEEHHHHHHHHHHHCCEEEECCCCCCCCCCCCHHHHHCCCEEECCCEEEEEE
GGCEYTADDVAAARDRLDQVHCSDELAEALCAGGLALGIGSLRAPLQALRAARAAAALAG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHC
RTEVTQEDVALATRLILVPRATRIPEMQQPEEEQPEEQQETQETEQQEQEEPPPPPEQED
CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC
DERPDEEDGGEQDEDDQGQDEDEDEEQAPAEIPAELVLDAARAVLPDNLLQQMKIRELAQ
CCCCCCCCCCCCCCCCCCCCCCCHHHCCCHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHH
RNRSQTPGRAGALQQGGGRGRPAGVRAGNPGGGARLNVVETLRTAAPWQPLRREHDQTGR
HCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHCCCCHHHHHHHHCCCC
RVIVRPEDFRVTRFKQRSQTTTIFAVDASGSSAMHRLSEAKGAVELLLAECYVRRDEVAL
EEEECCCCCHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
VAFRGRGAEVLLPPTRSLTRAKKGLAGLPGGGGTPLAAGIDTARQLTGEVRRKGATPVLI
EEEECCCCEEEECCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEE
LLTDGRANVTREGLGGRDKAQQEATEAARAIRVMGIRALVVDTSPRPRPMGRELAEAMGA
EEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCEEEEEEECCCCCCCCHHHHHHHHCC
DYLPLPRADASSISSAVQAVTGTGR
CCCCCCCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SAALDYNSAESAWEDAATAAALLAIDPPGVGGVCLRSLPGPVRDRWVQIARELLPAETP
CCCCCCCCHHHHHHHHHHHEEEEEECCCCCCHHHHHHCCCHHHHHHHHHHHHHCCCCCC
WRRIPINISDSRLLGGLDLTATLRSGRPVVERGVLAEVDGGVAVLAMAERIAPATAGKLG
CCEECCCCCCCCEECCCCCEEECCCCCCHHHCCCEEECCCCCHHHHHHHHHCCHHCCCCC
AVLDNGEVRLERDGLAERMTSRFGVIALDEGAEEDERPVGPLRDRLGCHLDLNGIPVHVA
EEECCCCEEEEHHHHHHHHHHHCCEEEECCCCCCCCCCCCHHHHHCCCEEECCCEEEEEE
GGCEYTADDVAAARDRLDQVHCSDELAEALCAGGLALGIGSLRAPLQALRAARAAAALAG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHC
RTEVTQEDVALATRLILVPRATRIPEMQQPEEEQPEEQQETQETEQQEQEEPPPPPEQED
CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC
DERPDEEDGGEQDEDDQGQDEDEDEEQAPAEIPAELVLDAARAVLPDNLLQQMKIRELAQ
CCCCCCCCCCCCCCCCCCCCCCCHHHCCCHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHH
RNRSQTPGRAGALQQGGGRGRPAGVRAGNPGGGARLNVVETLRTAAPWQPLRREHDQTGR
HCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHCCCCHHHHHHHHCCCC
RVIVRPEDFRVTRFKQRSQTTTIFAVDASGSSAMHRLSEAKGAVELLLAECYVRRDEVAL
EEEECCCCCHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
VAFRGRGAEVLLPPTRSLTRAKKGLAGLPGGGGTPLAAGIDTARQLTGEVRRKGATPVLI
EEEECCCCEEEECCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEE
LLTDGRANVTREGLGGRDKAQQEATEAARAIRVMGIRALVVDTSPRPRPMGRELAEAMGA
EEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCEEEEEEECCCCCCCCHHHHHHHHCC
DYLPLPRADASSISSAVQAVTGTGR
CCCCCCCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA