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The map label for this gene is crtI [H]

Identifier: 121998398

GI number: 121998398

Start: 1765633

End: 1767159

Strand: Reverse

Name: crtI [H]

Synonym: Hhal_1619

Alternate gene names: 121998398

Gene position: 1767159-1765633 (Counterclockwise)

Preceding gene: 121998399

Following gene: 121998397

Centisome position: 65.98

GC content: 65.03

Gene sequence:

>1527_bases
ATGCGAATGAATCCTGATGCCCCTGCTCCCGCTGTCGGTGGCCAGTCGCCCCACGCCGTGGTTATCGGTGCCGGCTTCGG
GGGGCTGGCAGCTGCGATCCGCCTCGGTGCGCGTGGTTACCGCGTCACCGTGGTGGATCGGCTCGATGGCCCCGGTGGCC
GGGCCTACGTGCACCAGCAAGACGGTTTTACCTTCGATGCGGGGCCAACGATCGTCACGGCACCGTTCCTTTTCCGTGAG
CTCTGGGAACTGGCCGGGCGGCGTTTCGAGGACGACATCGACCTGCGCCTGATGGATCCCTTCTACCGGGTGCGCTTCGA
CGACGGCAGCCACTTTGACTACACCGGTGATCCGGAGCGGATGCGGGCCGAAGTCGAGCGCTTCGCCCCGGGGGATCTCG
ACGGCTATCACCGCTACATGGCGGCCAGCGAGGAGATCTTCCGGATCGGCTTCGAGCAGCTCAGCTATAAGCCGTTCAAC
CGGTTTACGGACATGCTGCGCGTGGTCCCCGACCTGATCCGGTTGCAGAGCTACTACAGCGTTCACGGCCTGGTCTCGCG
CTACGTCAAGGATGAGCGGCTGCGCCAGGTGCTGAGCTTCCATCCGCTGCTCATCGGTGGCAACCCCTTCTCGGTCACCT
CGGTCTACTGCCTGATCGAGTACCTTGAGCAGCACTGGGGCGTCCACTACGTCATGGGCGGCACCGGGAAGCTCGCCAGC
GGCATGGCGGATCTGGTCGCCGGGCAGGGGGGTGAGATCCGCTACAACGCCGATGTGGAAGCGATCACCGTGGATCAGGG
GCGTGCCACCGGTGTGGAGCTGGCCAACGGTGAGCGCATCGATGCCGATGTCGTGGTCTCCAACGCCGACGCCGCCTGGA
CCTACCGCAAGCTCGTCCCGGCGAGCGCCCGCAGTCGCTGGACCGATCGTCGCCTGGATCGGGCGCGCTACTCCATGGGG
CTTTACGTCTGGTACTTCGGTACCCGTCGCCAGTACCACGACGTACCGCACCACACCATTCTCATGGGGCCGCGGTACAA
GGAACTCATCCAGGATATTTTCGAGCGCAAGGTGCTGGCGGACGACTTCAGCCTCTACCTGCACCGTCCGACGGCCACCG
ATCCGTCGCTGGCGCCCGAGGGCTGTGACGCCTTCTATGTGCTCTCGCCGGTGCCGCACCTCGGCAGCGACGTGGACTGG
GAGACGCAGGCCGAGCCTTATCGGCAGGCGATCTCCAAGTATCTCAGTCAGACCGTTCTGCCCGGCCTGGAGGATGAGCT
GGCGACCTCGCTGGTGGCTACGCCGCTCGACTTCCGTCACCGGTTGAAGTCCTGGCTCGGTACCGGTTTCAGCCTGGAGC
CGGTGCTGCAGCAAAGCGCCTGGTTCCGCCCCCACAATCGCAGTGAAGATGTCCAGCACCTCTACCTGGTCGGCGCCGGT
ACCCACCCCGGTGCCGGTCTGCCCGGAGTGGTTTCTTCTGCCAAGATCCTCGACGAGGTAGTCCCTGATGCTCGTACCTT
CGCCTGA

Upstream 100 bases:

>100_bases
ACCGAGCAGGTCCTGGCCGCCATCCGCGCCACCGCGCCAAAAGGTCGCGGTGGCGCGGATATTCGTTGACATAGTCCCGA
CCGTACTTAAGGTGAAACCC

Downstream 100 bases:

>100_bases
TCCAAGCCTGGCACCGGAGCCATATCTGCTCCACACGGATCGCCGAGCTTGTCGGGCCCTGCTTAGCACCGGGTCGCGGA
CTTTCATGGCCGCGTCCTGG

Product: phytoene dehydrogenase-like protein

Products: NA

Alternate protein names: Phytoene desaturase [H]

Number of amino acids: Translated: 508; Mature: 508

Protein sequence:

>508_residues
MRMNPDAPAPAVGGQSPHAVVIGAGFGGLAAAIRLGARGYRVTVVDRLDGPGGRAYVHQQDGFTFDAGPTIVTAPFLFRE
LWELAGRRFEDDIDLRLMDPFYRVRFDDGSHFDYTGDPERMRAEVERFAPGDLDGYHRYMAASEEIFRIGFEQLSYKPFN
RFTDMLRVVPDLIRLQSYYSVHGLVSRYVKDERLRQVLSFHPLLIGGNPFSVTSVYCLIEYLEQHWGVHYVMGGTGKLAS
GMADLVAGQGGEIRYNADVEAITVDQGRATGVELANGERIDADVVVSNADAAWTYRKLVPASARSRWTDRRLDRARYSMG
LYVWYFGTRRQYHDVPHHTILMGPRYKELIQDIFERKVLADDFSLYLHRPTATDPSLAPEGCDAFYVLSPVPHLGSDVDW
ETQAEPYRQAISKYLSQTVLPGLEDELATSLVATPLDFRHRLKSWLGTGFSLEPVLQQSAWFRPHNRSEDVQHLYLVGAG
THPGAGLPGVVSSAKILDEVVPDARTFA

Sequences:

>Translated_508_residues
MRMNPDAPAPAVGGQSPHAVVIGAGFGGLAAAIRLGARGYRVTVVDRLDGPGGRAYVHQQDGFTFDAGPTIVTAPFLFRE
LWELAGRRFEDDIDLRLMDPFYRVRFDDGSHFDYTGDPERMRAEVERFAPGDLDGYHRYMAASEEIFRIGFEQLSYKPFN
RFTDMLRVVPDLIRLQSYYSVHGLVSRYVKDERLRQVLSFHPLLIGGNPFSVTSVYCLIEYLEQHWGVHYVMGGTGKLAS
GMADLVAGQGGEIRYNADVEAITVDQGRATGVELANGERIDADVVVSNADAAWTYRKLVPASARSRWTDRRLDRARYSMG
LYVWYFGTRRQYHDVPHHTILMGPRYKELIQDIFERKVLADDFSLYLHRPTATDPSLAPEGCDAFYVLSPVPHLGSDVDW
ETQAEPYRQAISKYLSQTVLPGLEDELATSLVATPLDFRHRLKSWLGTGFSLEPVLQQSAWFRPHNRSEDVQHLYLVGAG
THPGAGLPGVVSSAKILDEVVPDARTFA
>Mature_508_residues
MRMNPDAPAPAVGGQSPHAVVIGAGFGGLAAAIRLGARGYRVTVVDRLDGPGGRAYVHQQDGFTFDAGPTIVTAPFLFRE
LWELAGRRFEDDIDLRLMDPFYRVRFDDGSHFDYTGDPERMRAEVERFAPGDLDGYHRYMAASEEIFRIGFEQLSYKPFN
RFTDMLRVVPDLIRLQSYYSVHGLVSRYVKDERLRQVLSFHPLLIGGNPFSVTSVYCLIEYLEQHWGVHYVMGGTGKLAS
GMADLVAGQGGEIRYNADVEAITVDQGRATGVELANGERIDADVVVSNADAAWTYRKLVPASARSRWTDRRLDRARYSMG
LYVWYFGTRRQYHDVPHHTILMGPRYKELIQDIFERKVLADDFSLYLHRPTATDPSLAPEGCDAFYVLSPVPHLGSDVDW
ETQAEPYRQAISKYLSQTVLPGLEDELATSLVATPLDFRHRLKSWLGTGFSLEPVLQQSAWFRPHNRSEDVQHLYLVGAG
THPGAGLPGVVSSAKILDEVVPDARTFA

Specific function: This enzyme converts phytoene into zeta-carotene via the intermediary of phytofluene by the symmetrical introduction of two double bonds at the C-11 and C-11' positions of phytoene [H]

COG id: COG1233

COG function: function code Q; Phytoene dehydrogenase and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the carotenoid/retinoid oxidoreductase family [H]

Homologues:

Organism=Caenorhabditis elegans, GI17540238, Length=528, Percent_Identity=23.4848484848485, Blast_Score=102, Evalue=5e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002937
- InterPro:   IPR008150
- InterPro:   IPR014105 [H]

Pfam domain/function: PF01593 Amino_oxidase [H]

EC number: NA

Molecular weight: Translated: 56936; Mature: 56936

Theoretical pI: Translated: 6.17; Mature: 6.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRMNPDAPAPAVGGQSPHAVVIGAGFGGLAAAIRLGARGYRVTVVDRLDGPGGRAYVHQQ
CCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHCCCCEEEEEEEECCCCCCCEEEECC
DGFTFDAGPTIVTAPFLFRELWELAGRRFEDDIDLRLMDPFYRVRFDDGSHFDYTGDPER
CCEEECCCCCEEEHHHHHHHHHHHCCCCCCCCCCEEEECCEEEEEECCCCCCCCCCCHHH
MRAEVERFAPGDLDGYHRYMAASEEIFRIGFEQLSYKPFNRFTDMLRVVPDLIRLQSYYS
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
VHGLVSRYVKDERLRQVLSFHPLLIGGNPFSVTSVYCLIEYLEQHWGVHYVMGGTGKLAS
HHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHCCEEEEECCCCHHHH
GMADLVAGQGGEIRYNADVEAITVDQGRATGVELANGERIDADVVVSNADAAWTYRKLVP
HHHHHHCCCCCCEEECCCEEEEEECCCCCCCEEECCCCCCCCEEEEECCCCHHHHHHHCC
ASARSRWTDRRLDRARYSMGLYVWYFGTRRQYHDVPHHTILMGPRYKELIQDIFERKVLA
CHHHHHHHHHHHHHHHHHCEEEEEEECCCCHHCCCCCCEEEECCHHHHHHHHHHHHHHHH
DDFSLYLHRPTATDPSLAPEGCDAFYVLSPVPHLGSDVDWETQAEPYRQAISKYLSQTVL
CCEEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHC
PGLEDELATSLVATPLDFRHRLKSWLGTGFSLEPVLQQSAWFRPHNRSEDVQHLYLVGAG
CCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCEEEEEEECC
THPGAGLPGVVSSAKILDEVVPDARTFA
CCCCCCCCHHHHHHHHHHHHCCCHHCCC
>Mature Secondary Structure
MRMNPDAPAPAVGGQSPHAVVIGAGFGGLAAAIRLGARGYRVTVVDRLDGPGGRAYVHQQ
CCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHCCCCEEEEEEEECCCCCCCEEEECC
DGFTFDAGPTIVTAPFLFRELWELAGRRFEDDIDLRLMDPFYRVRFDDGSHFDYTGDPER
CCEEECCCCCEEEHHHHHHHHHHHCCCCCCCCCCEEEECCEEEEEECCCCCCCCCCCHHH
MRAEVERFAPGDLDGYHRYMAASEEIFRIGFEQLSYKPFNRFTDMLRVVPDLIRLQSYYS
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
VHGLVSRYVKDERLRQVLSFHPLLIGGNPFSVTSVYCLIEYLEQHWGVHYVMGGTGKLAS
HHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHCCEEEEECCCCHHHH
GMADLVAGQGGEIRYNADVEAITVDQGRATGVELANGERIDADVVVSNADAAWTYRKLVP
HHHHHHCCCCCCEEECCCEEEEEECCCCCCCEEECCCCCCCCEEEEECCCCHHHHHHHCC
ASARSRWTDRRLDRARYSMGLYVWYFGTRRQYHDVPHHTILMGPRYKELIQDIFERKVLA
CHHHHHHHHHHHHHHHHHCEEEEEEECCCCHHCCCCCCEEEECCHHHHHHHHHHHHHHHH
DDFSLYLHRPTATDPSLAPEGCDAFYVLSPVPHLGSDVDWETQAEPYRQAISKYLSQTVL
CCEEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHC
PGLEDELATSLVATPLDFRHRLKSWLGTGFSLEPVLQQSAWFRPHNRSEDVQHLYLVGAG
CCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCEEEEEEECC
THPGAGLPGVVSSAKILDEVVPDARTFA
CCCCCCCCHHHHHHHHHHHHCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8021167; 7721699; 10648776 [H]