Click here to switch to the map view.

The map label for this gene is 121998354

Identifier: 121998354

GI number: 121998354

Start: 1715987

End: 1716775

Strand: Reverse

Name: 121998354

Synonym: Hhal_1575

Alternate gene names: NA

Gene position: 1716775-1715987 (Counterclockwise)

Preceding gene: 121998355

Following gene: 121998351

Centisome position: 64.1

GC content: 67.55

Gene sequence:

>789_bases
ATGAGAAAGCTTGTCATCACGGTGCTGCTTCTCTTGGGTCTGGTCGCCGGGACCGTCTACGCCGTCGGCCATATCCCCGC
GGGGTCAGCCTGGAACGCCGCCGAACGCCACCTCCCGGTTCCGGCTGCCTGGGGCAGAGCGGAGGTGGAGGGCAGCTTGC
GCGCAGGACGGGTGCAGCGGCTTGAAATCCCCCGGCTCTGGGGGGTGGACCCCGGCACCCTGGATGTCGCCTGGGAGGTT
CAGGGTCGCTCCCTGGTCGCTGGTCGGCTGAAGGTGGACCTGGACGGTAGTCTCGACGACGCCCGTTTCCAGGGGGTGGC
CACTCGCTCGGCTGGCGGCTGGCAAGTCTCTGAGGGGAGCGGCGAGGTCTCTATGGATCGCCTGCGCCAGATGGCAAGCC
AGCGCGGGGTCGAACTGCCGCCGGTTAGCGGTACGGTCGCCTACCAGATCGATCGCCTGTCCTTGAGCAACGACGGCGAG
CTCCGGTCGGTTGAGGGGCGCGTCACAGGCCGTGATTTGACTGTCACCCACGAAGGCGAACGGTTGGATCTGGGCAGTGT
GGTGTCGTCGGTCAGCAGCTCGGACAACCGTGCCTACGGAGAGGTCCACGACCAGGGCGGCCCCGTCGCACTGGACGGCC
AATGGCAGGTCTCGCGAGACGGCAGCTACCATCTCGATGCCACGGTGACGACCCGCGAAGGTGCCGACCCGGCGTTACGC
GATTGGCTTGCGCAGTACGCCGAGCCGGACGGTGACGGGTTCCGGGTTCGCGAATCGGGGCGGCGTTAA

Upstream 100 bases:

>100_bases
GCAGGAGCGGCTGATGGAACTGCTCCGGCCTTGATCGACCCCTGCGGCGGGGTATCGATCGGCGCGCCGCCGCCTTCAAC
GAACCAGCAGGTCAGAGCGC

Downstream 100 bases:

>100_bases
GAGGGCGCGCTAGTAAGAGGTGGGGGGGGACATCTCTTAACGGAGGGGAGGGCTTAGTCTGTTCTGAGCCCGTTAGATGT
CGGAGCAGTTCCTGCAGGCA

Product: type II secretion system protein N

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 262; Mature: 262

Protein sequence:

>262_residues
MRKLVITVLLLLGLVAGTVYAVGHIPAGSAWNAAERHLPVPAAWGRAEVEGSLRAGRVQRLEIPRLWGVDPGTLDVAWEV
QGRSLVAGRLKVDLDGSLDDARFQGVATRSAGGWQVSEGSGEVSMDRLRQMASQRGVELPPVSGTVAYQIDRLSLSNDGE
LRSVEGRVTGRDLTVTHEGERLDLGSVVSSVSSSDNRAYGEVHDQGGPVALDGQWQVSRDGSYHLDATVTTREGADPALR
DWLAQYAEPDGDGFRVRESGRR

Sequences:

>Translated_262_residues
MRKLVITVLLLLGLVAGTVYAVGHIPAGSAWNAAERHLPVPAAWGRAEVEGSLRAGRVQRLEIPRLWGVDPGTLDVAWEV
QGRSLVAGRLKVDLDGSLDDARFQGVATRSAGGWQVSEGSGEVSMDRLRQMASQRGVELPPVSGTVAYQIDRLSLSNDGE
LRSVEGRVTGRDLTVTHEGERLDLGSVVSSVSSSDNRAYGEVHDQGGPVALDGQWQVSRDGSYHLDATVTTREGADPALR
DWLAQYAEPDGDGFRVRESGRR
>Mature_262_residues
MRKLVITVLLLLGLVAGTVYAVGHIPAGSAWNAAERHLPVPAAWGRAEVEGSLRAGRVQRLEIPRLWGVDPGTLDVAWEV
QGRSLVAGRLKVDLDGSLDDARFQGVATRSAGGWQVSEGSGEVSMDRLRQMASQRGVELPPVSGTVAYQIDRLSLSNDGE
LRSVEGRVTGRDLTVTHEGERLDLGSVVSSVSSSDNRAYGEVHDQGGPVALDGQWQVSRDGSYHLDATVTTREGADPALR
DWLAQYAEPDGDGFRVRESGRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28174; Mature: 28174

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKLVITVLLLLGLVAGTVYAVGHIPAGSAWNAAERHLPVPAAWGRAEVEGSLRAGRVQR
CHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCEEE
LEIPRLWGVDPGTLDVAWEVQGRSLVAGRLKVDLDGSLDDARFQGVATRSAGGWQVSEGS
EECCEEECCCCCCEEEEEEECCCEEEEEEEEEEECCCCCCHHHCEEEECCCCCEEEECCC
GEVSMDRLRQMASQRGVELPPVSGTVAYQIDRLSLSNDGELRSVEGRVTGRDLTVTHEGE
CCCCHHHHHHHHHHCCCCCCCCCCEEEEEEEEEEECCCCCEEEECCEECCCEEEEEECCC
RLDLGSVVSSVSSSDNRAYGEVHDQGGPVALDGQWQVSRDGSYHLDATVTTREGADPALR
CCCHHHHHHHHCCCCCCEECEEECCCCCEEECCCEEECCCCCEEEEEEEEECCCCCHHHH
DWLAQYAEPDGDGFRVRESGRR
HHHHHHCCCCCCCEEECCCCCC
>Mature Secondary Structure
MRKLVITVLLLLGLVAGTVYAVGHIPAGSAWNAAERHLPVPAAWGRAEVEGSLRAGRVQR
CHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCEEE
LEIPRLWGVDPGTLDVAWEVQGRSLVAGRLKVDLDGSLDDARFQGVATRSAGGWQVSEGS
EECCEEECCCCCCEEEEEEECCCEEEEEEEEEEECCCCCCHHHCEEEECCCCCEEEECCC
GEVSMDRLRQMASQRGVELPPVSGTVAYQIDRLSLSNDGELRSVEGRVTGRDLTVTHEGE
CCCCHHHHHHHHHHCCCCCCCCCCEEEEEEEEEEECCCCCEEEECCEECCCEEEEEECCC
RLDLGSVVSSVSSSDNRAYGEVHDQGGPVALDGQWQVSRDGSYHLDATVTTREGADPALR
CCCHHHHHHHHCCCCCCEECEEECCCCCEEECCCEEECCCCCEEEEEEEEECCCCCHHHH
DWLAQYAEPDGDGFRVRESGRR
HHHHHHCCCCCCCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA