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The map label for this gene is ydiS [C]

Identifier: 121998274

GI number: 121998274

Start: 1611764

End: 1613401

Strand: Reverse

Name: ydiS [C]

Synonym: Hhal_1492

Alternate gene names: 121998274

Gene position: 1613401-1611764 (Counterclockwise)

Preceding gene: 121998275

Following gene: 121998273

Centisome position: 60.24

GC content: 68.25

Gene sequence:

>1638_bases
TTGGATCAGGAGGAACTTGAGCGCGAAACGCTGACCTACGACGTTGTCGTGGTCGGTGCCGGGCCGGCGGGGTTGGCGGC
CGCCCTGGAGCTTGTGCGCGGCACCGATGACGGCTCGCCACCGTCGGTCTGCGTCCTGGAGAAGGGCGCGGCGGTCGGCG
CCCACCTGATATCCGGTGCCGCCATCGATCCCCGCGGCCTCAACGAACTCTTGCCCGACTGGGCGGATCGCGGCGCTCCG
CTCCGGGTGTCTGCCACTGAAGACAGCCTCCGCTACCTGACGCCGCGGCGTGCCGTGAAGTTGCCCACCCCCCCGCAGAT
GGAGAATCGTGGCAACTACGTCGGCAGCCTCGGCGAACTCGGGCAGTGGCTCGCCGAGCAGGCCGAGGCGGCCGGCGTCG
AGATCTACCCCGGTTTCCCGGCCGCGGAGGTGCTCTACGATGACAACGGTGCGGTCTGCGGGGTGGCAACCCCGGATATG
GGGCGACAGCCCGATGGCACGCCGGGGCCCGGGTTCGAGCCGGGCGTGGAGGTGCGGGCGCGGCAGACGGTCTTCGCCGA
GGGGGCTCACGGGTCGCTGACCCAGCAGGTGATCGGACACTTCGACTTGCGGGCCGATGCCCAGCCGCAGACCTACGGCC
TGGGGCTCAAGGAGATCTGGGAGGTTGCCCCGGAGCGCCACGCGCCGGGGCGGATCGACCATACGATCGGCTGGCCACTG
GATCAGTTCACGTACGGCGGTAGTTTCCTCTACCACCTGGATGATCGCCGTGTTGCGATCGGCCTGGTGGTGGGGTTGGA
TTATGAAAACCCGTATCTGTCGCCGTTCGGAGAGTTCCAGCGTTTCAAGACCCATCCCTCCATCCGCCCCCTGCTCGAGG
GCGGTCGGCGCATCGGCTACGGGGCCCGGGTCCTGCCCGAGGGCGGCTGGCAGAGCCTGCCACGGTTGAGTTTCCCGGGG
GGCGTGCTGGCCGGTGACGCAGCCGGTTTCGTCAATGTGCCCCGGATCAAGGGCATCCACACCGCCATCAAGTCCGGCAT
GCTCGCCGCAGAGGCCGTTCGTGCCGCCCTGGAGGCGACCCGTGTCGAGGCCGAGGACCTGGATCGACGGGTCCGGGAGA
GCTGGCTGCGGGACGAGCTCTACGCGGTGCGCAACATCCGTCCGGCGTTCCGCTGGGGGGTGCTGCCCGGTCTGGCCTAC
TCAGCCCTGGATACCTATCTCCTCAGGGGGCGTGCCCCCTGGACCCTGGGCCACGAACCGGACCACCAAAGCCTGCGGCC
GGCGGCGCAGTGTCGACCCAAGGATGATCCCAAGCCGGACGGGGTGGTGACCTTCGATCGTACGGCCTCGGTGTTCCTCT
CCGGCACCAACCACGAAGAGGGGCAGCCCTGCCATCTGGTGTTGCAGGACGCCGATCGGCTTGCCCGGGTGAACTGGGCG
ATCTATGCGGGGCCTGAGGTGAGGTACTGCCCGGCCGCCGTCTACGATTATGAGCTCGATGAGGCCGGGCAGCATCGCCT
GCGCATCGACGCCATTAATTGCCTGCACTGCAAGGCTTGCGACATCAAGGACCCGACGCAGAATATCCGGTGGGTGGTGC
CGCAGGGCGGGGACGGACCCAACTACCAGGGGATGTGA

Upstream 100 bases:

>100_bases
CCACATCCTGCCGCGGCTCCACGGCTATACACCGGCCATCCGGGGTGGCAGCGATGAGCTCGAGGCGATTGACGACGGCC
ATTGGTGAGGAGGCTCCGGT

Downstream 100 bases:

>100_bases
CGTCGCTCGGGCTCCGGCAGTGGGGGGCGGCATCTCGATCGTGGATCGCTGCTTTCCGCGGCTACTCCTGTTGGGGTGAA
AGGGATAGACTGCAGGGTAG

Product: electron-transferring-flavoprotein dehydrogenase

Products: NA

Alternate protein names: ETF-QO; ETF-ubiquinone oxidoreductase; Electron-transferring-flavoprotein dehydrogenase; ETF dehydrogenase [H]

Number of amino acids: Translated: 545; Mature: 545

Protein sequence:

>545_residues
MDQEELERETLTYDVVVVGAGPAGLAAALELVRGTDDGSPPSVCVLEKGAAVGAHLISGAAIDPRGLNELLPDWADRGAP
LRVSATEDSLRYLTPRRAVKLPTPPQMENRGNYVGSLGELGQWLAEQAEAAGVEIYPGFPAAEVLYDDNGAVCGVATPDM
GRQPDGTPGPGFEPGVEVRARQTVFAEGAHGSLTQQVIGHFDLRADAQPQTYGLGLKEIWEVAPERHAPGRIDHTIGWPL
DQFTYGGSFLYHLDDRRVAIGLVVGLDYENPYLSPFGEFQRFKTHPSIRPLLEGGRRIGYGARVLPEGGWQSLPRLSFPG
GVLAGDAAGFVNVPRIKGIHTAIKSGMLAAEAVRAALEATRVEAEDLDRRVRESWLRDELYAVRNIRPAFRWGVLPGLAY
SALDTYLLRGRAPWTLGHEPDHQSLRPAAQCRPKDDPKPDGVVTFDRTASVFLSGTNHEEGQPCHLVLQDADRLARVNWA
IYAGPEVRYCPAAVYDYELDEAGQHRLRIDAINCLHCKACDIKDPTQNIRWVVPQGGDGPNYQGM

Sequences:

>Translated_545_residues
MDQEELERETLTYDVVVVGAGPAGLAAALELVRGTDDGSPPSVCVLEKGAAVGAHLISGAAIDPRGLNELLPDWADRGAP
LRVSATEDSLRYLTPRRAVKLPTPPQMENRGNYVGSLGELGQWLAEQAEAAGVEIYPGFPAAEVLYDDNGAVCGVATPDM
GRQPDGTPGPGFEPGVEVRARQTVFAEGAHGSLTQQVIGHFDLRADAQPQTYGLGLKEIWEVAPERHAPGRIDHTIGWPL
DQFTYGGSFLYHLDDRRVAIGLVVGLDYENPYLSPFGEFQRFKTHPSIRPLLEGGRRIGYGARVLPEGGWQSLPRLSFPG
GVLAGDAAGFVNVPRIKGIHTAIKSGMLAAEAVRAALEATRVEAEDLDRRVRESWLRDELYAVRNIRPAFRWGVLPGLAY
SALDTYLLRGRAPWTLGHEPDHQSLRPAAQCRPKDDPKPDGVVTFDRTASVFLSGTNHEEGQPCHLVLQDADRLARVNWA
IYAGPEVRYCPAAVYDYELDEAGQHRLRIDAINCLHCKACDIKDPTQNIRWVVPQGGDGPNYQGM
>Mature_545_residues
MDQEELERETLTYDVVVVGAGPAGLAAALELVRGTDDGSPPSVCVLEKGAAVGAHLISGAAIDPRGLNELLPDWADRGAP
LRVSATEDSLRYLTPRRAVKLPTPPQMENRGNYVGSLGELGQWLAEQAEAAGVEIYPGFPAAEVLYDDNGAVCGVATPDM
GRQPDGTPGPGFEPGVEVRARQTVFAEGAHGSLTQQVIGHFDLRADAQPQTYGLGLKEIWEVAPERHAPGRIDHTIGWPL
DQFTYGGSFLYHLDDRRVAIGLVVGLDYENPYLSPFGEFQRFKTHPSIRPLLEGGRRIGYGARVLPEGGWQSLPRLSFPG
GVLAGDAAGFVNVPRIKGIHTAIKSGMLAAEAVRAALEATRVEAEDLDRRVRESWLRDELYAVRNIRPAFRWGVLPGLAY
SALDTYLLRGRAPWTLGHEPDHQSLRPAAQCRPKDDPKPDGVVTFDRTASVFLSGTNHEEGQPCHLVLQDADRLARVNWA
IYAGPEVRYCPAAVYDYELDEAGQHRLRIDAINCLHCKACDIKDPTQNIRWVVPQGGDGPNYQGM

Specific function: Accepts electrons from ETF and reduces ubiquinone [H]

COG id: COG0644

COG function: function code C; Dehydrogenases (flavoproteins)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]

Homologues:

Organism=Homo sapiens, GI119703746, Length=557, Percent_Identity=53.6804308797127, Blast_Score=596, Evalue=1e-170,
Organism=Escherichia coli, GI1787991, Length=392, Percent_Identity=30.3571428571429, Blast_Score=122, Evalue=8e-29,
Organism=Escherichia coli, GI1786227, Length=334, Percent_Identity=29.0419161676647, Blast_Score=114, Evalue=2e-26,
Organism=Escherichia coli, GI87082155, Length=345, Percent_Identity=29.2753623188406, Blast_Score=95, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI25144720, Length=561, Percent_Identity=49.9108734402852, Blast_Score=555, Evalue=1e-158,
Organism=Saccharomyces cerevisiae, GI6324932, Length=566, Percent_Identity=46.8197879858657, Blast_Score=504, Evalue=1e-143,
Organism=Drosophila melanogaster, GI24652256, Length=556, Percent_Identity=52.158273381295, Blast_Score=577, Evalue=1e-165,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR007859
- InterPro:   IPR003042 [H]

Pfam domain/function: PF05187 ETF_QO [H]

EC number: =1.5.5.1 [H]

Molecular weight: Translated: 59359; Mature: 59359

Theoretical pI: Translated: 5.10; Mature: 5.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDQEELERETLTYDVVVVGAGPAGLAAALELVRGTDDGSPPSVCVLEKGAAVGAHLISGA
CCHHHHHHHHEEEEEEEEECCCHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHCCC
AIDPRGLNELLPDWADRGAPLRVSATEDSLRYLTPRRAVKLPTPPQMENRGNYVGSLGEL
CCCCCCHHHHCHHHHCCCCCEEEECCCCHHHHCCCCCEEECCCCCCCCCCCCCCCCHHHH
GQWLAEQAEAAGVEIYPGFPAAEVLYDDNGAVCGVATPDMGRQPDGTPGPGFEPGVEVRA
HHHHHHHHHHCCEEEECCCCCEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEE
RQTVFAEGAHGSLTQQVIGHFDLRADAQPQTYGLGLKEIWEVAPERHAPGRIDHTIGWPL
EEEEEECCCCCHHHHHHHHCCCCCCCCCCCHHCCCHHHHHHHCCCCCCCCCCCCCCCCCH
DQFTYGGSFLYHLDDRRVAIGLVVGLDYENPYLSPFGEFQRFKTHPSIRPLLEGGRRIGY
HHHCCCCEEEEEECCCEEEEEEEEEECCCCCCCCCHHHHHHHHCCCCHHHHHHCCCEECC
GARVLPEGGWQSLPRLSFPGGVLAGDAAGFVNVPRIKGIHTAIKSGMLAAEAVRAALEAT
CCEECCCCCCCCCCCCCCCCCEEECCCCCCEECCCHHHHHHHHHHCHHHHHHHHHHHHHH
RVEAEDLDRRVRESWLRDELYAVRNIRPAFRWGVLPGLAYSALDTYLLRGRAPWTLGHEP
HCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCC
DHQSLRPAAQCRPKDDPKPDGVVTFDRTASVFLSGTNHEEGQPCHLVLQDADRLARVNWA
CHHHCCHHHHCCCCCCCCCCCEEEECCCEEEEEECCCCCCCCCEEEEECCCHHHHHEEEE
IYAGPEVRYCPAAVYDYELDEAGQHRLRIDAINCLHCKACDIKDPTQNIRWVVPQGGDGP
EEECCCCEECCCEEEECCCCCCCCCEEEEEEEEEEEECCCCCCCCCCCCEEEEECCCCCC
NYQGM
CCCCC
>Mature Secondary Structure
MDQEELERETLTYDVVVVGAGPAGLAAALELVRGTDDGSPPSVCVLEKGAAVGAHLISGA
CCHHHHHHHHEEEEEEEEECCCHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHCCC
AIDPRGLNELLPDWADRGAPLRVSATEDSLRYLTPRRAVKLPTPPQMENRGNYVGSLGEL
CCCCCCHHHHCHHHHCCCCCEEEECCCCHHHHCCCCCEEECCCCCCCCCCCCCCCCHHHH
GQWLAEQAEAAGVEIYPGFPAAEVLYDDNGAVCGVATPDMGRQPDGTPGPGFEPGVEVRA
HHHHHHHHHHCCEEEECCCCCEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEE
RQTVFAEGAHGSLTQQVIGHFDLRADAQPQTYGLGLKEIWEVAPERHAPGRIDHTIGWPL
EEEEEECCCCCHHHHHHHHCCCCCCCCCCCHHCCCHHHHHHHCCCCCCCCCCCCCCCCCH
DQFTYGGSFLYHLDDRRVAIGLVVGLDYENPYLSPFGEFQRFKTHPSIRPLLEGGRRIGY
HHHCCCCEEEEEECCCEEEEEEEEEECCCCCCCCCHHHHHHHHCCCCHHHHHHCCCEECC
GARVLPEGGWQSLPRLSFPGGVLAGDAAGFVNVPRIKGIHTAIKSGMLAAEAVRAALEAT
CCEECCCCCCCCCCCCCCCCCEEECCCCCCEECCCHHHHHHHHHHCHHHHHHHHHHHHHH
RVEAEDLDRRVRESWLRDELYAVRNIRPAFRWGVLPGLAYSALDTYLLRGRAPWTLGHEP
HCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCC
DHQSLRPAAQCRPKDDPKPDGVVTFDRTASVFLSGTNHEEGQPCHLVLQDADRLARVNWA
CHHHCCHHHHCCCCCCCCCCCEEEECCCEEEEEECCCCCCCCCEEEEECCCHHHHHEEEE
IYAGPEVRYCPAAVYDYELDEAGQHRLRIDAINCLHCKACDIKDPTQNIRWVVPQGGDGP
EEECCCCEECCCEEEECCCCCCCCCEEEEEEEEEEEECCCCCCCCCCCCEEEEECCCCCC
NYQGM
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]