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The map label for this gene is hip1 [H]

Identifier: 121998270

GI number: 121998270

Start: 1607165

End: 1607485

Strand: Reverse

Name: hip1 [H]

Synonym: Hhal_1488

Alternate gene names: 121998270

Gene position: 1607485-1607165 (Counterclockwise)

Preceding gene: 121998273

Following gene: 121998269

Centisome position: 60.02

GC content: 65.42

Gene sequence:

>321_bases
ATGAGCGGAATCGACAAGAGTCGTCGGACCTTCCTCAAGGGCAGCGCTGCGGCGCTGGCGGCCCTGCCGTTATCGACCCT
GCTCCATCACGGCAGCGTCCGGGCCGAGTCTCGCGCCGAAGACGGCCACGCCCACGATTACGTTAACGATGCGGCGGATG
CCTCCGATCATGCGAGGTTCGAGGAGGGTCAGCTCTGCGAGAACTGTGTCTTTTGGGGGGAGGGGGTCGAGAACGGCTGG
GGGCGTTGCACCCATCCGGACTTCGACGACGTGCTCGTCCGGGCTGAAGGGTGGTGCTCGGTTTACGCACCGGCGTCCTG
A

Upstream 100 bases:

>100_bases
ATCTGCAACACGCCCCCCGCTCGTTTCAGGTTGGATACGGGGCCGATGAGGCGTAGGCTCAAACTCGCAACGTAAACCGA
GCGGAAAAGAGGTGACTAGC

Downstream 100 bases:

>100_bases
GAGGCGTGATCGGCTCACCCGCCGGGTTGGCCTAGAAGCGCCTGATTCGGCTTCTGCAAACCCAAGACTGCGCCGCCCGA
TCCCTCCGCAGAGGGACCAG

Product: high potential iron-sulfur protein

Products: NA

Alternate protein names: HiPIP 1; High-redox-potential ferredoxin 1 [H]

Number of amino acids: Translated: 106; Mature: 105

Protein sequence:

>106_residues
MSGIDKSRRTFLKGSAAALAALPLSTLLHHGSVRAESRAEDGHAHDYVNDAADASDHARFEEGQLCENCVFWGEGVENGW
GRCTHPDFDDVLVRAEGWCSVYAPAS

Sequences:

>Translated_106_residues
MSGIDKSRRTFLKGSAAALAALPLSTLLHHGSVRAESRAEDGHAHDYVNDAADASDHARFEEGQLCENCVFWGEGVENGW
GRCTHPDFDDVLVRAEGWCSVYAPAS
>Mature_105_residues
SGIDKSRRTFLKGSAAALAALPLSTLLHHGSVRAESRAEDGHAHDYVNDAADASDHARFEEGQLCENCVFWGEGVENGWG
RCTHPDFDDVLVRAEGWCSVYAPAS

Specific function: Specific class of high-redox-potential 4Fe-4S ferredoxins. Functions in anaerobic electron transport in most purple and in some other photosynthetic bacteria and in at least one genus (Paracoccus) of halophilic, denitrifying bacteria [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the high-potential iron-sulfur protein (HiPIP) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000170 [H]

Pfam domain/function: PF01355 HIPIP [H]

EC number: NA

Molecular weight: Translated: 11475; Mature: 11343

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: PS00596 HIPIP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGIDKSRRTFLKGSAAALAALPLSTLLHHGSVRAESRAEDGHAHDYVNDAADASDHARF
CCCCCCHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCC
EEGQLCENCVFWGEGVENGWGRCTHPDFDDVLVRAEGWCSVYAPAS
CCCCHHHHHHHCCCCCCCCCCCCCCCCHHHEEEECCCCEEECCCCC
>Mature Secondary Structure 
SGIDKSRRTFLKGSAAALAALPLSTLLHHGSVRAESRAEDGHAHDYVNDAADASDHARF
CCCCCHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCC
EEGQLCENCVFWGEGVENGWGRCTHPDFDDVLVRAEGWCSVYAPAS
CCCCHHHHHHHCCCCCCCCCCCCCCCCHHHEEEECCCCEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 4037807; 1917989; 7957186; 7957187; 8917441 [H]