Definition Halorhodospira halophila SL1 chromosome, complete genome.
Accession NC_008789
Length 2,678,452

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The map label for this gene is 121998269

Identifier: 121998269

GI number: 121998269

Start: 1606473

End: 1607003

Strand: Reverse

Name: 121998269

Synonym: Hhal_1487

Alternate gene names: NA

Gene position: 1607003-1606473 (Counterclockwise)

Preceding gene: 121998270

Following gene: 121998268

Centisome position: 60.0

GC content: 67.8

Gene sequence:

>531_bases
ATGCCAGTTCGACGCCGCTTCGATCCCATGACCCTCGTTTTCCTGCTCCTGGCACTGCTTGCCGGCACCGCCGTTTACGT
CCTCCACGGGCCGGCGGTCTGGGCGGAGGCACTGGCTCGGGCCGCCGAGCTGATGCTTCAGGTAGCGCCGATCATCCTGG
CGGCGGTGCTCATGTCCGGGTATGTTCAGACCCTGATTCCCCGCCACGCGATCGAGCGTTGGCTGGGCCGGCGCAGTGGT
GCCCGGGGGCTGGTGCTGGCTACCGCTGCCGGTGCGCTCACCCCGGGGGGGCCGTTCGCCGCATTCCCGCTGGTTGTGGC
GTTGTTGCGCACCGGGGCCGCCTTCGAGGTGTGCGTGGCCTACCTGACAGCCTGGTCGGTGCTTGGCCTCAATCGGGCGC
TGGTCTGGGAAGTGCCGTTCTTCGGCCTGGACTTCGTGGCGCTGAAGATGCTGGTTTCCTTGCCGCTGCCCTTCCTCGCT
GCCTTGCTGGTTCGTCCTCTGGCCCGTCGTCTGATGCCGACGCCATGCTGA

Upstream 100 bases:

>100_bases
CCAAGACTGCGCCGCCCGATCCCTCCGCAGAGGGACCAGGTGGCGCACGGTTCGTTTGGCCCCTGCTCGGGTCCAGAAAG
GGACGTTCCCCTGAGTCGCT

Downstream 100 bases:

>100_bases
CTGCCTTTCTGATCATCCTGGCCCTGCTGGCGGCTTCCGTGCTGCTGGCCCACTTTCTGCCCCATGCAAGCCATCGTGCC
GCGGTGCAGGAGGGGGGACG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 176; Mature: 175

Protein sequence:

>176_residues
MPVRRRFDPMTLVFLLLALLAGTAVYVLHGPAVWAEALARAAELMLQVAPIILAAVLMSGYVQTLIPRHAIERWLGRRSG
ARGLVLATAAGALTPGGPFAAFPLVVALLRTGAAFEVCVAYLTAWSVLGLNRALVWEVPFFGLDFVALKMLVSLPLPFLA
ALLVRPLARRLMPTPC

Sequences:

>Translated_176_residues
MPVRRRFDPMTLVFLLLALLAGTAVYVLHGPAVWAEALARAAELMLQVAPIILAAVLMSGYVQTLIPRHAIERWLGRRSG
ARGLVLATAAGALTPGGPFAAFPLVVALLRTGAAFEVCVAYLTAWSVLGLNRALVWEVPFFGLDFVALKMLVSLPLPFLA
ALLVRPLARRLMPTPC
>Mature_175_residues
PVRRRFDPMTLVFLLLALLAGTAVYVLHGPAVWAEALARAAELMLQVAPIILAAVLMSGYVQTLIPRHAIERWLGRRSGA
RGLVLATAAGALTPGGPFAAFPLVVALLRTGAAFEVCVAYLTAWSVLGLNRALVWEVPFFGLDFVALKMLVSLPLPFLAA
LLVRPLARRLMPTPC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18923; Mature: 18792

Theoretical pI: Translated: 11.50; Mature: 11.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVRRRFDPMTLVFLLLALLAGTAVYVLHGPAVWAEALARAAELMLQVAPIILAAVLMSG
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YVQTLIPRHAIERWLGRRSGARGLVLATAAGALTPGGPFAAFPLVVALLRTGAAFEVCVA
HHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHH
YLTAWSVLGLNRALVWEVPFFGLDFVALKMLVSLPLPFLAALLVRPLARRLMPTPC
HHHHHHHHHCCHHHHEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
PVRRRFDPMTLVFLLLALLAGTAVYVLHGPAVWAEALARAAELMLQVAPIILAAVLMSG
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YVQTLIPRHAIERWLGRRSGARGLVLATAAGALTPGGPFAAFPLVVALLRTGAAFEVCVA
HHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHH
YLTAWSVLGLNRALVWEVPFFGLDFVALKMLVSLPLPFLAALLVRPLARRLMPTPC
HHHHHHHHHCCHHHHEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA