| Definition | Halorhodospira halophila SL1 chromosome, complete genome. |
|---|---|
| Accession | NC_008789 |
| Length | 2,678,452 |
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The map label for this gene is arsR [C]
Identifier: 121998203
GI number: 121998203
Start: 1534159
End: 1534500
Strand: Reverse
Name: arsR [C]
Synonym: Hhal_1421
Alternate gene names: 121998203
Gene position: 1534500-1534159 (Counterclockwise)
Preceding gene: 121998207
Following gene: 121998202
Centisome position: 57.29
GC content: 68.42
Gene sequence:
>342_bases ATGGGCATGGGAGAATCCCAACCGGATGCAGAGACATTGGCGTTCATCGCCGCGCAGTTCCGGGCGCTGGGTGAGCCGCT GCGCCTTCAGCTGCTCCACGCCCTGCGGGATGGTGAGAAGAGTGTTGGGGAGCTGGTGGAGCTCACCGGCTCTTCGCAAC CGAACATCTCGCGGCACCTGAGCGTGCTGCGCCAGCACGGCCTGGTGCGGCGGCGCAGTTGCGGAACACTGGCCTACTTC GCCATCGCGGCCCCCCACGTCTTCGATCTGTGTGATGCGGTGTGCGGCGTCCAGGGGGGCGGGCAGCCGGCGTCCGCGCC GCGTCAGCCCGACGTGCCGTAA
Upstream 100 bases:
>100_bases ATAATGGATTCGCTCACTTGTATATGAGAGTATATGCATATACTGCTACACGCATCAATAGTCGCCGGGGCCTGCCCGGC GCGGCGGAGGGGGTGAGGTT
Downstream 100 bases:
>100_bases TCCTTGCGGGCCTGTCCGGCGGGGGGCGGTTAGCTGTTAGACTGAGCCGCCATCGACGGGTCCACAGAAGGCGAACAACA TGGCCGCAGGAACAGAGGGC
Product: regulatory protein, ArsR
Products: NA
Alternate protein names: Transcriptional Regulator ArsR Family; Transcriptional Regulator; Transcriptional Regulator ArsR Family Protein; Regulatory Protein ArsR; ArsR Family Regulatory Protein; ArsR Family Transcriptional Repressor; Transcriptional Regulator TrmB; Transcription Regulator ArsR
Number of amino acids: Translated: 113; Mature: 112
Protein sequence:
>113_residues MGMGESQPDAETLAFIAAQFRALGEPLRLQLLHALRDGEKSVGELVELTGSSQPNISRHLSVLRQHGLVRRRSCGTLAYF AIAAPHVFDLCDAVCGVQGGGQPASAPRQPDVP
Sequences:
>Translated_113_residues MGMGESQPDAETLAFIAAQFRALGEPLRLQLLHALRDGEKSVGELVELTGSSQPNISRHLSVLRQHGLVRRRSCGTLAYF AIAAPHVFDLCDAVCGVQGGGQPASAPRQPDVP >Mature_112_residues GMGESQPDAETLAFIAAQFRALGEPLRLQLLHALRDGEKSVGELVELTGSSQPNISRHLSVLRQHGLVRRRSCGTLAYFA IAAPHVFDLCDAVCGVQGGGQPASAPRQPDVP
Specific function: Transcriptional Repressor For The Arsefg Operon. Arse Is A Trans-Acting Regulatory Protein Which Controls Its Own Expression. The Repressive Effect Of Arse Is Alleviated By Oxyions Of +III Oxidation State Of Arsenic, Antimony, And Bismuth, As Well As Arse
COG id: COG0640
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12016; Mature: 11885
Theoretical pI: Translated: 6.93; Mature: 6.93
Prosite motif: PS50987 HTH_ARSR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGMGESQPDAETLAFIAAQFRALGEPLRLQLLHALRDGEKSVGELVELTGSSQPNISRHL CCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHH SVLRQHGLVRRRSCGTLAYFAIAAPHVFDLCDAVCGVQGGGQPASAPRQPDVP HHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure GMGESQPDAETLAFIAAQFRALGEPLRLQLLHALRDGEKSVGELVELTGSSQPNISRHL CCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHH SVLRQHGLVRRRSCGTLAYFAIAAPHVFDLCDAVCGVQGGGQPASAPRQPDVP HHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA