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The map label for this gene is regB [H]

Identifier: 121998202

GI number: 121998202

Start: 1532769

End: 1534079

Strand: Reverse

Name: regB [H]

Synonym: Hhal_1420

Alternate gene names: 121998202

Gene position: 1534079-1532769 (Counterclockwise)

Preceding gene: 121998203

Following gene: 121998201

Centisome position: 57.27

GC content: 64.91

Gene sequence:

>1311_bases
ATGGCCGCAGGAACAGAGGGCGTGCCGCGTTTCGAGCCCGCCCAGGCGGTGCGCATCCTCGCCTGGATGCGCATCACCGC
CACCACGGGGCAGATGATCACTGTCCTCTTCGTCCATTTCGGACTGGGCCTGACCCTGCCGCTGGTGCCGCTGCTGCTGA
CGATCACCGCGCTGGCTGCATGGAACGTCTTCGCCTTCTGGCGCCTGCGCAACACCCCCGAACAGATCTCCCAGCCCGAG
GTCGTGTTCAACGTCCTCATCGATGTCGTAGCGCTCACCGTGCTCCTCGGGCTGACCGGCGGTCCCTCTAACCCCTTCGT
CTCGCTCTACCTGGTGCCGGTGGCGCTGTCCGCCGTGGCCATGCCGGCCAACCTGGCCCTGGTCGTAGCAATCCTCTGCC
TTGTCCTCTACGGGCTTCTGCTGGCGGTCTATCTGCCGATGGAGGGCCCGCACCCGATCATCGGGGGCGATTTCAACCTG
CACATGATCGGCATGTGGGTGAACTTCGTGATCTCCGCCTGGATGATCACCGTGTTCGTCCGTTTCATGTCCTCGGTCCT
GCGCCGGCAGGACTGGCGCCTGTCGAGGGCCCGGGAGCATACCCTGCGCAACGAGCAGATCGTGGCCCTCGGTACCGTGG
CTGCGGGCGCGGCCCATCAACTCGGGACGCCGCTTTCGACCATGTCCATGGTCGTCGACGAGCTGCGCCAGGAACGTCGC
GATGACACCGAGCTTCAGCAGGATCTTGACCTGTTGCGCTCGCAGCTTGCGGTGTGCAAGGAAACCCTGGAAGATCTCAA
GGACGCCGGGGCAGCTGGCAGTGATCAGGGGGGACGCACGGTCTCACTGCAGAAGCACGTGGCGCGTATCGTGGATACCT
GGCGGCTGATGCACCCGAAGATCGAGCCCAGCGTGGAGTATCAGCAGCCGTTCGTGGATGTCGAGATCAGCCAGGATCCG
ACGCTCATGCACGCCCTGCTCAATCTCCTGAACAACGCCGCCGAGGCGTCGCTGGAGAATGGCTGCAGTGGGGTCGAGGT
CTCGATCAGCAGCGACGGTGGCAAATTGACCCTGGTGATCGATGACGAGGGCACGGGGCTCGACTCCGAGCGCGTGCGTA
CCGCAGGTCGGGTGGTGCAGACCACCAAGCCATCGGGCATGGGGATCGGGCTGGTGCTTGCCAATGCGACCGTGGACCGT
TTCGGCGGCAGTGTCACCCTGATGGATTCACCGAAGGGCCGGGGGGCACGAACGAAGATCGAGGTCTCCCTCGAACGGCT
GCGCGCGGACCACAACCGCGGCAGCGACTGA

Upstream 100 bases:

>100_bases
CGTCAGCCCGACGTGCCGTAATCCTTGCGGGCCTGTCCGGCGGGGGGCGGTTAGCTGTTAGACTGAGCCGCCATCGACGG
GTCCACAGAAGGCGAACAAC

Downstream 100 bases:

>100_bases
GGGAGAGAGCCGGTGAGGCTTGAGGAGGAGAGGAGGTGAACCATGTTGAACGGGCCATCGATCCTGATCATCGATGACGA
TACGACCTTCTCCCAGGTGC

Product: integral membrane sensor signal transduction histidine kinase

Products: NA

Alternate protein names: Protein prrB [H]

Number of amino acids: Translated: 436; Mature: 435

Protein sequence:

>436_residues
MAAGTEGVPRFEPAQAVRILAWMRITATTGQMITVLFVHFGLGLTLPLVPLLLTITALAAWNVFAFWRLRNTPEQISQPE
VVFNVLIDVVALTVLLGLTGGPSNPFVSLYLVPVALSAVAMPANLALVVAILCLVLYGLLLAVYLPMEGPHPIIGGDFNL
HMIGMWVNFVISAWMITVFVRFMSSVLRRQDWRLSRAREHTLRNEQIVALGTVAAGAAHQLGTPLSTMSMVVDELRQERR
DDTELQQDLDLLRSQLAVCKETLEDLKDAGAAGSDQGGRTVSLQKHVARIVDTWRLMHPKIEPSVEYQQPFVDVEISQDP
TLMHALLNLLNNAAEASLENGCSGVEVSISSDGGKLTLVIDDEGTGLDSERVRTAGRVVQTTKPSGMGIGLVLANATVDR
FGGSVTLMDSPKGRGARTKIEVSLERLRADHNRGSD

Sequences:

>Translated_436_residues
MAAGTEGVPRFEPAQAVRILAWMRITATTGQMITVLFVHFGLGLTLPLVPLLLTITALAAWNVFAFWRLRNTPEQISQPE
VVFNVLIDVVALTVLLGLTGGPSNPFVSLYLVPVALSAVAMPANLALVVAILCLVLYGLLLAVYLPMEGPHPIIGGDFNL
HMIGMWVNFVISAWMITVFVRFMSSVLRRQDWRLSRAREHTLRNEQIVALGTVAAGAAHQLGTPLSTMSMVVDELRQERR
DDTELQQDLDLLRSQLAVCKETLEDLKDAGAAGSDQGGRTVSLQKHVARIVDTWRLMHPKIEPSVEYQQPFVDVEISQDP
TLMHALLNLLNNAAEASLENGCSGVEVSISSDGGKLTLVIDDEGTGLDSERVRTAGRVVQTTKPSGMGIGLVLANATVDR
FGGSVTLMDSPKGRGARTKIEVSLERLRADHNRGSD
>Mature_435_residues
AAGTEGVPRFEPAQAVRILAWMRITATTGQMITVLFVHFGLGLTLPLVPLLLTITALAAWNVFAFWRLRNTPEQISQPEV
VFNVLIDVVALTVLLGLTGGPSNPFVSLYLVPVALSAVAMPANLALVVAILCLVLYGLLLAVYLPMEGPHPIIGGDFNLH
MIGMWVNFVISAWMITVFVRFMSSVLRRQDWRLSRAREHTLRNEQIVALGTVAAGAAHQLGTPLSTMSMVVDELRQERRD
DTELQQDLDLLRSQLAVCKETLEDLKDAGAAGSDQGGRTVSLQKHVARIVDTWRLMHPKIEPSVEYQQPFVDVEISQDPT
LMHALLNLLNNAAEASLENGCSGVEVSISSDGGKLTLVIDDEGTGLDSERVRTAGRVVQTTKPSGMGIGLVLANATVDRF
GGSVTLMDSPKGRGARTKIEVSLERLRADHNRGSD

Specific function: Member of the two-component regulatory system RegB/RegA. Involved in the positive regulation of photosynthesis gene expression in response to anaerobiosis. Also involved in positive regulation of the cbbI and cbbII Calvin cycle CO2 fixation operons, as we

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 47354; Mature: 47222

Theoretical pI: Translated: 5.85; Mature: 5.85

Prosite motif: PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAGTEGVPRFEPAQAVRILAWMRITATTGQMITVLFVHFGLGLTLPLVPLLLTITALAA
CCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
WNVFAFWRLRNTPEQISQPEVVFNVLIDVVALTVLLGLTGGPSNPFVSLYLVPVALSAVA
HHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHH
MPANLALVVAILCLVLYGLLLAVYLPMEGPHPIIGGDFNLHMIGMWVNFVISAWMITVFV
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHH
RFMSSVLRRQDWRLSRAREHTLRNEQIVALGTVAAGAAHQLGTPLSTMSMVVDELRQERR
HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHCHHHHHCCCHHHHHHHHHHHHHHHC
DDTELQQDLDLLRSQLAVCKETLEDLKDAGAAGSDQGGRTVSLQKHVARIVDTWRLMHPK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHHHHHHHHCCC
IEPSVEYQQPFVDVEISQDPTLMHALLNLLNNAAEASLENGCSGVEVSISSDGGKLTLVI
CCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEE
DDEGTGLDSERVRTAGRVVQTTKPSGMGIGLVLANATVDRFGGSVTLMDSPKGRGARTKI
CCCCCCCCHHHHHHHHHHEEECCCCCCEEEEEEECCHHHHCCCEEEEEECCCCCCCCCHH
EVSLERLRADHNRGSD
HHHHHHHHHCCCCCCC
>Mature Secondary Structure 
AAGTEGVPRFEPAQAVRILAWMRITATTGQMITVLFVHFGLGLTLPLVPLLLTITALAA
CCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
WNVFAFWRLRNTPEQISQPEVVFNVLIDVVALTVLLGLTGGPSNPFVSLYLVPVALSAVA
HHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHH
MPANLALVVAILCLVLYGLLLAVYLPMEGPHPIIGGDFNLHMIGMWVNFVISAWMITVFV
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHH
RFMSSVLRRQDWRLSRAREHTLRNEQIVALGTVAAGAAHQLGTPLSTMSMVVDELRQERR
HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHCHHHHHCCCHHHHHHHHHHHHHHHC
DDTELQQDLDLLRSQLAVCKETLEDLKDAGAAGSDQGGRTVSLQKHVARIVDTWRLMHPK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHHHHHHHHCCC
IEPSVEYQQPFVDVEISQDPTLMHALLNLLNNAAEASLENGCSGVEVSISSDGGKLTLVI
CCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEE
DDEGTGLDSERVRTAGRVVQTTKPSGMGIGLVLANATVDRFGGSVTLMDSPKGRGARTKI
CCCCCCCCHHHHHHHHHHEEECCCCCCEEEEEEECCHHHHCCCEEEEEECCCCCCCCCHH
EVSLERLRADHNRGSD
HHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7751278; 10358089 [H]