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The map label for this gene is yraQ [C]

Identifier: 121998164

GI number: 121998164

Start: 1489485

End: 1490573

Strand: Reverse

Name: yraQ [C]

Synonym: Hhal_1382

Alternate gene names: 121998164

Gene position: 1490573-1489485 (Counterclockwise)

Preceding gene: 121998165

Following gene: 121998160

Centisome position: 55.65

GC content: 73.09

Gene sequence:

>1089_bases
ATGATCGCGACCGCCATCGAAGCCGGCACCAACATCCTCGACATCACCGTGGCCGTGGCGCCGTGGCTGCTAATCGGCCT
GGCCCTGGGGGCGGTCGTCCAGGTATTGGTTCCCACGGACCGGCTCCGGCAGTGGCTGGGCGGGCAGGGCATCGGTGCGG
TGTCCCGGGCGGCGGTGATCGGTGCCCCGCTGCCGCTCTGCTCCTGCGGTGCCATCCCCACCGCGCTTTCCCTCCACCGC
AACGGAGCGTCGCGGGGGGCGTCGACGGCCTTCCTGGTGGGTACGCCGGGGATCGGCATCGACTCCGTGGTGCTGACCTG
GGTGCTGATGGGCCCGTTCATGGCGGGCTCTCGGGTGGTCGGCGCCGTGGCTACGGCCATCGCCACCGGGCTGGCCGTGG
AGCGGGTTGCGCCGGGGCCGGTGGGGCCGGCGAGCCAGCGCGACGGCTGCTGCGACGCGGGTTGTGACGGGGGCGCGGCG
GCCGAGGAGAGTGCTGCCAAGGGCGGCCCGCTCCGCCGCATGGGCCGGGTGATGCTCGAACTCATCGACGACATCGGCAC
CTGGGTGGTCATCGGCCTGATCCTGGCCGGGCTGATGCTCACCTTCGTTCCCCCGGGATCGCTGGCCACCTGGGGCAGCG
GCCTGTTGGCCATGGCCGTGCTGGCCCTGGTGGGAATCCCGCTGTACATCTGCGCCACGGCGGCCACACCGGTGGCTGCG
GCGATGCTGATCGCTGGGGTCTCCCCCGGGGCGGTGCTGGTCTTCCTCATCGCCGGACCGGTCACTAGTCTGGCCACGCT
GCTGGTTCTGCGGCGCGAACTGGGAACTGCCGCGGTGACCGCCTACCTGGGGAGCATTGTCGCCGCGGCCCTGGCCGTAG
GCCTGCTGATCGACGGGGTGGTGTCGCTGGGCGGGCTGGAGCCGACGGCGATGGTCGGGGCAGCCCGGGAGGTGTGGCCG
GACTGGATCGAGCGCACCGCCGCCGGCGTCATGCTCACGCTGATCTTCGCCCCGGCTCGGCGGGCGGTCTGGCGCGCCGC
CCACTGGGCCTGGTTCGTGGCGCGCGGTGGGCGAAGCGCCCGCGCCTAG

Upstream 100 bases:

>100_bases
CTGCGGCGTTGATCGCCGGCCGTCCCGATACCGCCGATCCCCCTTCGAAAATCCAGCCGACGCGGGCACCATAGGGGCCG
GACCAACCGGGGGCAGCCCC

Downstream 100 bases:

>100_bases
CTGAACAGGCGCAGCAGCGTCTGGCGGGCTGTCTCGGGCTCGAAGGGCTTGTCGCAGATGGTGTCCACCCCGGCCTGGGC
GACCCCCGCCAGGCTGGCCT

Product: permease

Products: NA

Alternate protein names: Permease Family

Number of amino acids: Translated: 362; Mature: 362

Protein sequence:

>362_residues
MIATAIEAGTNILDITVAVAPWLLIGLALGAVVQVLVPTDRLRQWLGGQGIGAVSRAAVIGAPLPLCSCGAIPTALSLHR
NGASRGASTAFLVGTPGIGIDSVVLTWVLMGPFMAGSRVVGAVATAIATGLAVERVAPGPVGPASQRDGCCDAGCDGGAA
AEESAAKGGPLRRMGRVMLELIDDIGTWVVIGLILAGLMLTFVPPGSLATWGSGLLAMAVLALVGIPLYICATAATPVAA
AMLIAGVSPGAVLVFLIAGPVTSLATLLVLRRELGTAAVTAYLGSIVAAALAVGLLIDGVVSLGGLEPTAMVGAAREVWP
DWIERTAAGVMLTLIFAPARRAVWRAAHWAWFVARGGRSARA

Sequences:

>Translated_362_residues
MIATAIEAGTNILDITVAVAPWLLIGLALGAVVQVLVPTDRLRQWLGGQGIGAVSRAAVIGAPLPLCSCGAIPTALSLHR
NGASRGASTAFLVGTPGIGIDSVVLTWVLMGPFMAGSRVVGAVATAIATGLAVERVAPGPVGPASQRDGCCDAGCDGGAA
AEESAAKGGPLRRMGRVMLELIDDIGTWVVIGLILAGLMLTFVPPGSLATWGSGLLAMAVLALVGIPLYICATAATPVAA
AMLIAGVSPGAVLVFLIAGPVTSLATLLVLRRELGTAAVTAYLGSIVAAALAVGLLIDGVVSLGGLEPTAMVGAAREVWP
DWIERTAAGVMLTLIFAPARRAVWRAAHWAWFVARGGRSARA
>Mature_362_residues
MIATAIEAGTNILDITVAVAPWLLIGLALGAVVQVLVPTDRLRQWLGGQGIGAVSRAAVIGAPLPLCSCGAIPTALSLHR
NGASRGASTAFLVGTPGIGIDSVVLTWVLMGPFMAGSRVVGAVATAIATGLAVERVAPGPVGPASQRDGCCDAGCDGGAA
AEESAAKGGPLRRMGRVMLELIDDIGTWVVIGLILAGLMLTFVPPGSLATWGSGLLAMAVLALVGIPLYICATAATPVAA
AMLIAGVSPGAVLVFLIAGPVTSLATLLVLRRELGTAAVTAYLGSIVAAALAVGLLIDGVVSLGGLEPTAMVGAAREVWP
DWIERTAAGVMLTLIFAPARRAVWRAAHWAWFVARGGRSARA

Specific function: Unknown

COG id: COG0701

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789541, Length=257, Percent_Identity=24.5136186770428, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36349; Mature: 36349

Theoretical pI: Translated: 8.39; Mature: 8.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIATAIEAGTNILDITVAVAPWLLIGLALGAVVQVLVPTDRLRQWLGGQGIGAVSRAAVI
CCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHH
GAPLPLCSCGAIPTALSLHRNGASRGASTAFLVGTPGIGIDSVVLTWVLMGPFMAGSRVV
CCCCCHHCCCCCHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCHHHH
GAVATAIATGLAVERVAPGPVGPASQRDGCCDAGCDGGAAAEESAAKGGPLRRMGRVMLE
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHH
LIDDIGTWVVIGLILAGLMLTFVPPGSLATWGSGLLAMAVLALVGIPLYICATAATPVAA
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AMLIAGVSPGAVLVFLIAGPVTSLATLLVLRRELGTAAVTAYLGSIVAAALAVGLLIDGV
HHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VSLGGLEPTAMVGAAREVWPDWIERTAAGVMLTLIFAPARRAVWRAAHWAWFVARGGRSA
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
RA
CC
>Mature Secondary Structure
MIATAIEAGTNILDITVAVAPWLLIGLALGAVVQVLVPTDRLRQWLGGQGIGAVSRAAVI
CCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHH
GAPLPLCSCGAIPTALSLHRNGASRGASTAFLVGTPGIGIDSVVLTWVLMGPFMAGSRVV
CCCCCHHCCCCCHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCHHHH
GAVATAIATGLAVERVAPGPVGPASQRDGCCDAGCDGGAAAEESAAKGGPLRRMGRVMLE
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHH
LIDDIGTWVVIGLILAGLMLTFVPPGSLATWGSGLLAMAVLALVGIPLYICATAATPVAA
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AMLIAGVSPGAVLVFLIAGPVTSLATLLVLRRELGTAAVTAYLGSIVAAALAVGLLIDGV
HHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VSLGGLEPTAMVGAAREVWPDWIERTAAGVMLTLIFAPARRAVWRAAHWAWFVARGGRSA
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
RA
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA