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The map label for this gene is yibQ [H]

Identifier: 121997999

GI number: 121997999

Start: 1313389

End: 1314207

Strand: Reverse

Name: yibQ [H]

Synonym: Hhal_1209

Alternate gene names: 121997999

Gene position: 1314207-1313389 (Counterclockwise)

Preceding gene: 121998000

Following gene: 121997998

Centisome position: 49.07

GC content: 66.54

Gene sequence:

>819_bases
GTGTGGGGGATCCGTCGATGGTTGGTTGCCGGCCTGCTGCTGCTTTGGAGTGCGCCGGCGTTGGCGCAGGACCCCGGGGG
CGCGGAGTGGATGCCGTTCCCCACGCCGGAGGTAGACCCCCCCGCGGGTCGGCCGGCGGCGTTGATCATCGACGATATCG
GCGACGACTGGGCGGCGGGCGTCCGTAGCATCGATCTGGCCGAAGGCGTGACCATCTCGGTGCTGCCGCACACCCCCCAC
GGCCGAAGCCTCGCGGAGCGCGCCCATGAGCGCGGTCACGAGGTGATGCTTCACCTGCCCATGGAGGCGAAGAACGGCGC
TGACCCCGGCCCCGGGGCGCTGTTCCTCGACATGGATGAGGAACAGGTCCGGAAGACCATCGCTCGCGCGCTGAAAAGCG
TGCCCCACGCCGCCGGCGTCAACAACCACATGGGTAGTCTGATCACCCGTCATCCCGGGCATATGACCTGGTTGATGGAG
GAACTGGCAGCACGCGAAGATCTCTACTTCATCGACAGTCGCACCTCGGCGCGCTCGGTGGCACAGCAGATGGCCGAGGA
GCACGGCGTGGACAACGCCGTGCGCCACGTCTTCCTCGATCCTCGGCGCGACACCGAGGTCATCGCCGAGCAATTCGAGC
GCTTCGTGACGCTGGCACAACAGGGCGATGGGGCGATCGCCATTGGTCATCCCTACCCGGAGACCCTGGATCTGCTCGAA
GAGGAATTGCCGCGGCTTCGCGAGCGGGGTGTGGCCCTGGTGCCCGCTAGCGAGTTGGTTGATGAACCGGCCACCGATCC
GTTAAAGGGAGATCGATGA

Upstream 100 bases:

>100_bases
GAGGACGCCGAAGAGGCGGCGGAGCTGGCCAAGGATGACTATGTGCTCAGCGAGGCGCTCAACCTGCTCAAGGGGCTGCG
CGTGTTCGAGGGGCGCTGAC

Downstream 100 bases:

>100_bases
TGAGTGTACGAGTTCTGGTTCCGCTGGCCCACGGCTGTGAGGAGCTGGAGGCGGTCACGGTGATCGACCTGCTGCGTCGG
GCCGGTGCCGAGGTGGTGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 272; Mature: 272

Protein sequence:

>272_residues
MWGIRRWLVAGLLLLWSAPALAQDPGGAEWMPFPTPEVDPPAGRPAALIIDDIGDDWAAGVRSIDLAEGVTISVLPHTPH
GRSLAERAHERGHEVMLHLPMEAKNGADPGPGALFLDMDEEQVRKTIARALKSVPHAAGVNNHMGSLITRHPGHMTWLME
ELAAREDLYFIDSRTSARSVAQQMAEEHGVDNAVRHVFLDPRRDTEVIAEQFERFVTLAQQGDGAIAIGHPYPETLDLLE
EELPRLRERGVALVPASELVDEPATDPLKGDR

Sequences:

>Translated_272_residues
MWGIRRWLVAGLLLLWSAPALAQDPGGAEWMPFPTPEVDPPAGRPAALIIDDIGDDWAAGVRSIDLAEGVTISVLPHTPH
GRSLAERAHERGHEVMLHLPMEAKNGADPGPGALFLDMDEEQVRKTIARALKSVPHAAGVNNHMGSLITRHPGHMTWLME
ELAAREDLYFIDSRTSARSVAQQMAEEHGVDNAVRHVFLDPRRDTEVIAEQFERFVTLAQQGDGAIAIGHPYPETLDLLE
EELPRLRERGVALVPASELVDEPATDPLKGDR
>Mature_272_residues
MWGIRRWLVAGLLLLWSAPALAQDPGGAEWMPFPTPEVDPPAGRPAALIIDDIGDDWAAGVRSIDLAEGVTISVLPHTPH
GRSLAERAHERGHEVMLHLPMEAKNGADPGPGALFLDMDEEQVRKTIARALKSVPHAAGVNNHMGSLITRHPGHMTWLME
ELAAREDLYFIDSRTSARSVAQQMAEEHGVDNAVRHVFLDPRRDTEVIAEQFERFVTLAQQGDGAIAIGHPYPETLDLLE
EELPRLRERGVALVPASELVDEPATDPLKGDR

Specific function: Unknown

COG id: COG2861

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0755 [H]

Homologues:

Organism=Escherichia coli, GI87082298, Length=220, Percent_Identity=36.3636363636364, Blast_Score=144, Evalue=7e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006837
- InterPro:   IPR011330
- InterPro:   IPR002509 [H]

Pfam domain/function: PF04748 Polysacc_deac_2 [H]

EC number: NA

Molecular weight: Translated: 29862; Mature: 29862

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWGIRRWLVAGLLLLWSAPALAQDPGGAEWMPFPTPEVDPPAGRPAALIIDDIGDDWAAG
CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHH
VRSIDLAEGVTISVLPHTPHGRSLAERAHERGHEVMLHLPMEAKNGADPGPGALFLDMDE
HHHHHHHCCCEEEEECCCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCEEEEECCH
EQVRKTIARALKSVPHAAGVNNHMGSLITRHPGHMTWLMEELAAREDLYFIDSRTSARSV
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCEEEEECCHHHHHH
AQQMAEEHGVDNAVRHVFLDPRRDTEVIAEQFERFVTLAQQGDGAIAIGHPYPETLDLLE
HHHHHHHCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHH
EELPRLRERGVALVPASELVDEPATDPLKGDR
HHHHHHHHCCEEEEEHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MWGIRRWLVAGLLLLWSAPALAQDPGGAEWMPFPTPEVDPPAGRPAALIIDDIGDDWAAG
CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHH
VRSIDLAEGVTISVLPHTPHGRSLAERAHERGHEVMLHLPMEAKNGADPGPGALFLDMDE
HHHHHHHCCCEEEEECCCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCEEEEECCH
EQVRKTIARALKSVPHAAGVNNHMGSLITRHPGHMTWLMEELAAREDLYFIDSRTSARSV
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCEEEEECCHHHHHH
AQQMAEEHGVDNAVRHVFLDPRRDTEVIAEQFERFVTLAQQGDGAIAIGHPYPETLDLLE
HHHHHHHCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHH
EELPRLRERGVALVPASELVDEPATDPLKGDR
HHHHHHHHCCEEEEEHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]