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The map label for this gene is ctpA [H]

Identifier: 121998000

GI number: 121998000

Start: 1314209

End: 1315456

Strand: Reverse

Name: ctpA [H]

Synonym: Hhal_1210

Alternate gene names: 121998000

Gene position: 1315456-1314209 (Counterclockwise)

Preceding gene: 121998001

Following gene: 121997999

Centisome position: 49.11

GC content: 69.07

Gene sequence:

>1248_bases
ATGCAATCCTGGAGCCTGACCCTGGCCGCCGCCCTGCTTGCGCTGTTCGTCGGCCCGGCCGTCGCCGATTCGCCGGCGGA
GGCCGAAGACGACCTGCCCATGGCGGAGCTGGAGCTGCTGAGCGAGGTCTACAGTCGGATCAAGCGGGACTACGTGGATG
AGGTGGATGACGCGGATCTGTTCCGGGCGGCGATCCGCGGGATGCTCTCGGAGCTGGATGCCCACTCGAGCTACCTCGAC
GAGGATGAACTCGAGCAGCTGCGCGAGGGCACCCGTGGCGAGTTCGGCGGCGTGGGCTTGGAGCTGAGCCGCCAGGACGA
CGAAATCCGCGTGGTCGCGCCCATCGATGACACCCCGGCCAGCCGGGCGGGGTTGCAGGCCGGTGACGTCCTCCTGCGCA
TCGACGGCGACACCGTGCGGGGGGCCAGCCTCAACGAGGTGGTGCAGCGCCTGCGCGGTGAGCCGGGCAGCGTCGTCGAG
GTGACCATCAGACGAACGGAGGACGAGGGCCGGACCCGTACCCTCGAACTCGAGCGCGACACCATCCAGGTGGAGAGCGT
GCGCGCCCGGATGCTCGAGCCGGGTTACGGCTACGTGCGTATCAGCCAGTTCCAGGAGCGCACCGCCAGCGACCTCTACC
CCGCCCTGGACCGCCTGCTCGAAGAGGCCGATGGTGCCCTCGACGGCCTTATCCTCGATCTGCGCAACAACCCGGGCGGG
GTCCTCGATCCGGCCGTGGCGGTGGCGGACGCCTTCCTGACCGAGGGCCGGATCGTCTACACCGAGGGGCGCATGCGTCA
GGCGCGCATGAGCTTCGACGCCACTCCGGTGGATCGGGCCCGAGGTGCGCCGATGGTGGTGCTGATCAATCGGGGCTCGG
CTTCGGGCTCCGAGATCGTCGCCGGGGCCCTGCAGGATCACCGGCGTGCCGTGATCATGGGTCGGGCCAGCTTCGGCAAG
GGGTCGGTGCAGAGTGTGTTGCCCCTCGACGGGGCCGCCATGAAGCTGACCACCGCCCGGTACTACACGCCCGATGGGCG
CTCGATCCAGGACGAGGGGATCCAGCCGGATATTGTCGTCGACAATCTGCGTCTGACGGAGACCGAAGACCGCGGGGCGG
AGGGGGTCCTGGATGCGCCCGAGGATGCCGAGGACGCCGAAGAGGCGGCGGAGCTGGCCAAGGATGACTATGTGCTCAGC
GAGGCGCTCAACCTGCTCAAGGGGCTGCGCGTGTTCGAGGGGCGCTGA

Upstream 100 bases:

>100_bases
CCGGGATGCCGGGCTGTACTTCGAGATCCGCGAGGGTGCCGAGCCACGCAACCCGCTGAATTGGCTACGCTGAGTACGCC
CGCCCAATGAAGGAGCTGCG

Downstream 100 bases:

>100_bases
CGTGTGGGGGATCCGTCGATGGTTGGTTGCCGGCCTGCTGCTGCTTTGGAGTGCGCCGGCGTTGGCGCAGGACCCCGGGG
GCGCGGAGTGGATGCCGTTC

Product: carboxyl-terminal protease

Products: NA

Alternate protein names: C-terminal-processing protease [H]

Number of amino acids: Translated: 415; Mature: 415

Protein sequence:

>415_residues
MQSWSLTLAAALLALFVGPAVADSPAEAEDDLPMAELELLSEVYSRIKRDYVDEVDDADLFRAAIRGMLSELDAHSSYLD
EDELEQLREGTRGEFGGVGLELSRQDDEIRVVAPIDDTPASRAGLQAGDVLLRIDGDTVRGASLNEVVQRLRGEPGSVVE
VTIRRTEDEGRTRTLELERDTIQVESVRARMLEPGYGYVRISQFQERTASDLYPALDRLLEEADGALDGLILDLRNNPGG
VLDPAVAVADAFLTEGRIVYTEGRMRQARMSFDATPVDRARGAPMVVLINRGSASGSEIVAGALQDHRRAVIMGRASFGK
GSVQSVLPLDGAAMKLTTARYYTPDGRSIQDEGIQPDIVVDNLRLTETEDRGAEGVLDAPEDAEDAEEAAELAKDDYVLS
EALNLLKGLRVFEGR

Sequences:

>Translated_415_residues
MQSWSLTLAAALLALFVGPAVADSPAEAEDDLPMAELELLSEVYSRIKRDYVDEVDDADLFRAAIRGMLSELDAHSSYLD
EDELEQLREGTRGEFGGVGLELSRQDDEIRVVAPIDDTPASRAGLQAGDVLLRIDGDTVRGASLNEVVQRLRGEPGSVVE
VTIRRTEDEGRTRTLELERDTIQVESVRARMLEPGYGYVRISQFQERTASDLYPALDRLLEEADGALDGLILDLRNNPGG
VLDPAVAVADAFLTEGRIVYTEGRMRQARMSFDATPVDRARGAPMVVLINRGSASGSEIVAGALQDHRRAVIMGRASFGK
GSVQSVLPLDGAAMKLTTARYYTPDGRSIQDEGIQPDIVVDNLRLTETEDRGAEGVLDAPEDAEDAEEAAELAKDDYVLS
EALNLLKGLRVFEGR
>Mature_415_residues
MQSWSLTLAAALLALFVGPAVADSPAEAEDDLPMAELELLSEVYSRIKRDYVDEVDDADLFRAAIRGMLSELDAHSSYLD
EDELEQLREGTRGEFGGVGLELSRQDDEIRVVAPIDDTPASRAGLQAGDVLLRIDGDTVRGASLNEVVQRLRGEPGSVVE
VTIRRTEDEGRTRTLELERDTIQVESVRARMLEPGYGYVRISQFQERTASDLYPALDRLLEEADGALDGLILDLRNNPGG
VLDPAVAVADAFLTEGRIVYTEGRMRQARMSFDATPVDRARGAPMVVLINRGSASGSEIVAGALQDHRRAVIMGRASFGK
GSVQSVLPLDGAAMKLTTARYYTPDGRSIQDEGIQPDIVVDNLRLTETEDRGAEGVLDAPEDAEDAEEAAELAKDDYVLS
EALNLLKGLRVFEGR

Specific function: Involved in protection of the bacterium from thermal and osmotic stresses (Potential) [H]

COG id: COG0793

COG function: function code M; Periplasmic protease

Gene ontology:

Cell location: Secreted (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

Organism=Escherichia coli, GI1788134, Length=359, Percent_Identity=28.9693593314763, Blast_Score=121, Evalue=1e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR005151
- InterPro:   IPR004447 [H]

Pfam domain/function: PF00595 PDZ; PF03572 Peptidase_S41 [H]

EC number: =3.4.21.102 [H]

Molecular weight: Translated: 45175; Mature: 45175

Theoretical pI: Translated: 4.15; Mature: 4.15

Prosite motif: PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSWSLTLAAALLALFVGPAVADSPAEAEDDLPMAELELLSEVYSRIKRDYVDEVDDADL
CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHH
FRAAIRGMLSELDAHSSYLDEDELEQLREGTRGEFGGVGLELSRQDDEIRVVAPIDDTPA
HHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCEEECCCCCCEEEEECCCCCCC
SRAGLQAGDVLLRIDGDTVRGASLNEVVQRLRGEPGSVVEVTIRRTEDEGRTRTLELERD
HHCCCCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCEEEEEEEECCCCCCEEEEEECCC
TIQVESVRARMLEPGYGYVRISQFQERTASDLYPALDRLLEEADGALDGLILDLRNNPGG
HHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCC
VLDPAVAVADAFLTEGRIVYTEGRMRQARMSFDATPVDRARGAPMVVLINRGSASGSEIV
CCCHHHHHHHHHHHCCEEEEECCCHHHHHHCCCCCCHHHHCCCCEEEEEECCCCCCHHHH
AGALQDHRRAVIMGRASFGKGSVQSVLPLDGAAMKLTTARYYTPDGRSIQDEGIQPDIVV
HHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCEEE
DNLRLTETEDRGAEGVLDAPEDAEDAEEAAELAKDDYVLSEALNLLKGLRVFEGR
CCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQSWSLTLAAALLALFVGPAVADSPAEAEDDLPMAELELLSEVYSRIKRDYVDEVDDADL
CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHH
FRAAIRGMLSELDAHSSYLDEDELEQLREGTRGEFGGVGLELSRQDDEIRVVAPIDDTPA
HHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCEEECCCCCCEEEEECCCCCCC
SRAGLQAGDVLLRIDGDTVRGASLNEVVQRLRGEPGSVVEVTIRRTEDEGRTRTLELERD
HHCCCCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCEEEEEEEECCCCCCEEEEEECCC
TIQVESVRARMLEPGYGYVRISQFQERTASDLYPALDRLLEEADGALDGLILDLRNNPGG
HHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCC
VLDPAVAVADAFLTEGRIVYTEGRMRQARMSFDATPVDRARGAPMVVLINRGSASGSEIV
CCCHHHHHHHHHHHCCEEEEECCCHHHHHHCCCCCCHHHHCCCCEEEEEECCCCCCHHHH
AGALQDHRRAVIMGRASFGKGSVQSVLPLDGAAMKLTTARYYTPDGRSIQDEGIQPDIVV
HHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCEEE
DNLRLTETEDRGAEGVLDAPEDAEDAEEAAELAKDDYVLSEALNLLKGLRVFEGR
CCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9141685 [H]