Click here to switch to the map view.

The map label for this gene is dksA [H]

Identifier: 121997786

GI number: 121997786

Start: 1067599

End: 1068033

Strand: Reverse

Name: dksA [H]

Synonym: Hhal_0995

Alternate gene names: 121997786

Gene position: 1068033-1067599 (Counterclockwise)

Preceding gene: 121997787

Following gene: 121997783

Centisome position: 39.88

GC content: 65.98

Gene sequence:

>435_bases
ATGGCTCCGACAAGACACGCGATGCCGGTCAAGGGCTTTGAGCCGTATCAGGCCGGTGAGACGGAAGAGTACATGAGTGA
CGAGCAGCTGGAGCACTTCCGCCAGCTGCTGCTGGCGTGGAAGCGTGAGCTCCAGGAAGAGGTGGAGCGCACCGTCCACC
ATATGCGCGACGACGCCAACAACCACGCCGACCCGTCGGACCGGGCTACCCAGGAAGAAGAGTTCGCCCTGGAGCTACGG
GCCCGGGATCGGGAGCGCAAGCTGATCCGCAAGATCGATCAGGCGCTGGACGGCATCCGCACCGGCGACTACGGCTACTG
CGAGCAGTGCGGGGTCGAGATCGGTCTGCGGCGGCTCGAGGCGCGTCCGACGGCGACCCTGTGCATCGACTGCAAGTCGC
TGGAAGAGATCCGCGAGCGGCAGCGCGTGGCCTGA

Upstream 100 bases:

>100_bases
CAATGGCTGATGTATTTCTCTCGGGCCAATGTGCTGTGCTGAGCGCAGTCCGGGGGCTTCGCTGAGGGCGGCGAGGGCCG
CAAAGGGAGGAGGACGCGGT

Downstream 100 bases:

>100_bases
TCCACGCGCTGCGGCGCGGCTACCGCATCAGCCGGAGTCCTCGGCGATCTCGGCGAGGGCTTCGGCCTGGTGTTCCTGGG
TGAGGCCGTCAAGGAGCTCA

Product: TraR/DksA family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 143

Protein sequence:

>144_residues
MAPTRHAMPVKGFEPYQAGETEEYMSDEQLEHFRQLLLAWKRELQEEVERTVHHMRDDANNHADPSDRATQEEEFALELR
ARDRERKLIRKIDQALDGIRTGDYGYCEQCGVEIGLRRLEARPTATLCIDCKSLEEIRERQRVA

Sequences:

>Translated_144_residues
MAPTRHAMPVKGFEPYQAGETEEYMSDEQLEHFRQLLLAWKRELQEEVERTVHHMRDDANNHADPSDRATQEEEFALELR
ARDRERKLIRKIDQALDGIRTGDYGYCEQCGVEIGLRRLEARPTATLCIDCKSLEEIRERQRVA
>Mature_143_residues
APTRHAMPVKGFEPYQAGETEEYMSDEQLEHFRQLLLAWKRELQEEVERTVHHMRDDANNHADPSDRATQEEEFALELRA
RDRERKLIRKIDQALDGIRTGDYGYCEQCGVEIGLRRLEARPTATLCIDCKSLEEIRERQRVA

Specific function: Dosage-dependent suppressor of a dnaK deletion mutation. It suppressed not only the temperature-sensitive growth but also the filamentous phenotype of the dnaK deletion strain, while the defect of lambda growth is not suppressed [H]

COG id: COG1734

COG function: function code T; DnaK suppressor protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 dksA C4-type zinc finger [H]

Homologues:

Organism=Escherichia coli, GI1786338, Length=134, Percent_Identity=63.4328358208955, Blast_Score=182, Evalue=7e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012784
- InterPro:   IPR020460
- InterPro:   IPR000962
- InterPro:   IPR020458 [H]

Pfam domain/function: PF01258 zf-dskA_traR [H]

EC number: NA

Molecular weight: Translated: 16913; Mature: 16782

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: PS01102 ZF_DKSA_1 ; PS51128 ZF_DKSA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAPTRHAMPVKGFEPYQAGETEEYMSDEQLEHFRQLLLAWKRELQEEVERTVHHMRDDAN
CCCCCCCCCCCCCCCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
NHADPSDRATQEEEFALELRARDRERKLIRKIDQALDGIRTGDYGYCEQCGVEIGLRRLE
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
ARPTATLCIDCKSLEEIRERQRVA
CCCCHHEEECHHHHHHHHHHHCCC
>Mature Secondary Structure 
APTRHAMPVKGFEPYQAGETEEYMSDEQLEHFRQLLLAWKRELQEEVERTVHHMRDDAN
CCCCCCCCCCCCCCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
NHADPSDRATQEEEFALELRARDRERKLIRKIDQALDGIRTGDYGYCEQCGVEIGLRRLE
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
ARPTATLCIDCKSLEEIRERQRVA
CCCCHHEEECHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]