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The map label for this gene is nfrA [C]

Identifier: 121997783

GI number: 121997783

Start: 1063715

End: 1065109

Strand: Reverse

Name: nfrA [C]

Synonym: Hhal_0992

Alternate gene names: 121997783

Gene position: 1065109-1063715 (Counterclockwise)

Preceding gene: 121997786

Following gene: 121997782

Centisome position: 39.77

GC content: 73.76

Gene sequence:

>1395_bases
ATGCCCGATCCGACCAAATTCCCCAGGGGCCGCCGCTCCCCGGCCTTTTGTTGCCTGCGGCCTAGTGTCGCGCTGGCCCT
CGGTAGCATCCTGGTCGTCGGGTGTGCCGGCCCCCAGCCCGATCCCGAGCCCCGCGCCGACGTGCCGAGCGCGACGTCTG
CCCCCGAGGTCGAGCCGTGGGAGCCCTCGCCGCGGGATCGGGCGATCCGCCACGTGCTGGCCGCCGAGATCGCGGTGCGT
CGGGATCAACTCGATCAGGCCTTGGTCCATTACGCCAAGGCCATGAGCCTCAGCCGCGACGAGCGGGTAGCGGAGCGCGC
CGTCCAGCTCAGCTTCATCCTCGAGGACGAGGGCGTCGCCCAGGAGGCTGCCGAGCGCTGGCAGGAGCTGGCCCCGGAGC
GGGTCGAGGCGCACCAGCTGCTCGGCCTGCTGGCCCTGCGCCGGGGCGATGAGCAGGCGGCCCGGGCGGAGCTGGAGAAG
GCCATCGAGCGCTGGCCGGGGACCGCCGGGCAGGCCTTCCTGCAGCTCGGCAGGCTGCTTGGGCACGGTGCCGACGCCGG
GGCGGCGGCGCGGGTGGTCGCCGAACTGGCCGAGGTGCACGCCGATGTCCCCGAGGCGCACCGGGTCCTGGCCGCTGCGG
CGGAGCGGGCCGGCGAAGACGAGCGGGCTGTGGCAGCGGCCGCCCGGGCCTTTGAGCTCGCCCCGGCGGACCGCGAGGCC
GGGGCGACCCTGCTGCGCACCGTCTTCCGGGCCGCCCGGGCTGGCACCCTCGAGCGTGACGAGGCCCTGGCGCACCTCGA
GCGTGTGCGCGACGGGCAGCCGGTGCTGGTGCCCCGGGTGGCCTTGCTGGAGGGGCAGCTGCTGCGCGAGGCGGGGCGGC
CCGAGGCCGCGCTGGCCGCCTACGAGCGGGGGCTGGAGGCCTCTTCCGAAGACCACGACCTGCTCTACGGGCGGGGGTTG
GCGCGGGCCGAGACCGGGGATGTGGACGGTGCCGTGGAGGACCTGCGGCGGGTTCTGGAGGCCGACCCCGGGGATCCCCA
CGCCCAGAATGCCCTCGGCTATACCCTGGTCGACCACAAGCGTGATCTGTCCGAGGCCCGGGAGCTGATCGAGAGCGCCC
TGGAGCAGGAGCCGGACAACGCCGCCTTTCTCGACAGCAAGGGGTGGCTGCTCTACCGGGAAGGGGATCCGGAGGCGGCG
TTGGAGTACCTGCGCCGCGCCTTCGATCAGGACCCCCATGGGGAGATCGGTGCCCACCTGGGGGAGGTGCTCTGGGAACT
CGGCGAGCGCAACGAGGCACGCGAGGTCTGGTGTCGGGCGCTGGATGCCGACGGTGGCCAGCGCGCCCTGAAGCGGACGC
TGGAACGCTACGAGGTGGATGTCGATGACCGGTAG

Upstream 100 bases:

>100_bases
GAGACTGGCGTCATTAGGCTTCGTTAGGGCACCATCAGGCGTCAACCCGGATTATTACGAAATGCGGACGCCCCGGTAAA
GCGTCTTGCCCGCAGAAAAA

Downstream 100 bases:

>100_bases
ATGGAGCCCGCGGCTGCTCGCCGGGCTGCTGGCGGCGCTGGTGCTGTCGGGGTGCGCCCTGTTGGTCCCCGAGGACGAGC
GGGAGGCGCAGTACGAGGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 464; Mature: 463

Protein sequence:

>464_residues
MPDPTKFPRGRRSPAFCCLRPSVALALGSILVVGCAGPQPDPEPRADVPSATSAPEVEPWEPSPRDRAIRHVLAAEIAVR
RDQLDQALVHYAKAMSLSRDERVAERAVQLSFILEDEGVAQEAAERWQELAPERVEAHQLLGLLALRRGDEQAARAELEK
AIERWPGTAGQAFLQLGRLLGHGADAGAAARVVAELAEVHADVPEAHRVLAAAAERAGEDERAVAAAARAFELAPADREA
GATLLRTVFRAARAGTLERDEALAHLERVRDGQPVLVPRVALLEGQLLREAGRPEAALAAYERGLEASSEDHDLLYGRGL
ARAETGDVDGAVEDLRRVLEADPGDPHAQNALGYTLVDHKRDLSEARELIESALEQEPDNAAFLDSKGWLLYREGDPEAA
LEYLRRAFDQDPHGEIGAHLGEVLWELGERNEAREVWCRALDADGGQRALKRTLERYEVDVDDR

Sequences:

>Translated_464_residues
MPDPTKFPRGRRSPAFCCLRPSVALALGSILVVGCAGPQPDPEPRADVPSATSAPEVEPWEPSPRDRAIRHVLAAEIAVR
RDQLDQALVHYAKAMSLSRDERVAERAVQLSFILEDEGVAQEAAERWQELAPERVEAHQLLGLLALRRGDEQAARAELEK
AIERWPGTAGQAFLQLGRLLGHGADAGAAARVVAELAEVHADVPEAHRVLAAAAERAGEDERAVAAAARAFELAPADREA
GATLLRTVFRAARAGTLERDEALAHLERVRDGQPVLVPRVALLEGQLLREAGRPEAALAAYERGLEASSEDHDLLYGRGL
ARAETGDVDGAVEDLRRVLEADPGDPHAQNALGYTLVDHKRDLSEARELIESALEQEPDNAAFLDSKGWLLYREGDPEAA
LEYLRRAFDQDPHGEIGAHLGEVLWELGERNEAREVWCRALDADGGQRALKRTLERYEVDVDDR
>Mature_463_residues
PDPTKFPRGRRSPAFCCLRPSVALALGSILVVGCAGPQPDPEPRADVPSATSAPEVEPWEPSPRDRAIRHVLAAEIAVRR
DQLDQALVHYAKAMSLSRDERVAERAVQLSFILEDEGVAQEAAERWQELAPERVEAHQLLGLLALRRGDEQAARAELEKA
IERWPGTAGQAFLQLGRLLGHGADAGAAARVVAELAEVHADVPEAHRVLAAAAERAGEDERAVAAAARAFELAPADREAG
ATLLRTVFRAARAGTLERDEALAHLERVRDGQPVLVPRVALLEGQLLREAGRPEAALAAYERGLEASSEDHDLLYGRGLA
RAETGDVDGAVEDLRRVLEADPGDPHAQNALGYTLVDHKRDLSEARELIESALEQEPDNAAFLDSKGWLLYREGDPEAAL
EYLRRAFDQDPHGEIGAHLGEVLWELGERNEAREVWCRALDADGGQRALKRTLERYEVDVDDR

Specific function: Required For Bacteriophage N4 Adsorption. Serves As The Phage Receptor. [C]

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Outer Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 5 TPR repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011717
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR013105
- InterPro:   IPR019734 [H]

Pfam domain/function: PF07719 TPR_2; PF07721 TPR_4 [H]

EC number: NA

Molecular weight: Translated: 50682; Mature: 50551

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.2 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDPTKFPRGRRSPAFCCLRPSVALALGSILVVGCAGPQPDPEPRADVPSATSAPEVEPW
CCCCCCCCCCCCCCCEEEECHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCC
EPSPRDRAIRHVLAAEIAVRRDQLDQALVHYAKAMSLSRDERVAERAVQLSFILEDEGVA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHEECCCCHH
QEAAERWQELAPERVEAHQLLGLLALRRGDEQAARAELEKAIERWPGTAGQAFLQLGRLL
HHHHHHHHHHCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
GHGADAGAAARVVAELAEVHADVPEAHRVLAAAAERAGEDERAVAAAARAFELAPADREA
CCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHH
GATLLRTVFRAARAGTLERDEALAHLERVRDGQPVLVPRVALLEGQLLREAGRPEAALAA
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHH
YERGLEASSEDHDLLYGRGLARAETGDVDGAVEDLRRVLEADPGDPHAQNALGYTLVDHK
HHHCCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHCCCHHHHHHH
RDLSEARELIESALEQEPDNAAFLDSKGWLLYREGDPEAALEYLRRAFDQDPHGEIGAHL
HHHHHHHHHHHHHHHCCCCCCEEECCCCEEEEECCCHHHHHHHHHHHHCCCCCCHHHHHH
GEVLWELGERNEAREVWCRALDADGGQRALKRTLERYEVDVDDR
HHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
PDPTKFPRGRRSPAFCCLRPSVALALGSILVVGCAGPQPDPEPRADVPSATSAPEVEPW
CCCCCCCCCCCCCCEEEECHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCC
EPSPRDRAIRHVLAAEIAVRRDQLDQALVHYAKAMSLSRDERVAERAVQLSFILEDEGVA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHEECCCCHH
QEAAERWQELAPERVEAHQLLGLLALRRGDEQAARAELEKAIERWPGTAGQAFLQLGRLL
HHHHHHHHHHCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
GHGADAGAAARVVAELAEVHADVPEAHRVLAAAAERAGEDERAVAAAARAFELAPADREA
CCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHH
GATLLRTVFRAARAGTLERDEALAHLERVRDGQPVLVPRVALLEGQLLREAGRPEAALAA
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHH
YERGLEASSEDHDLLYGRGLARAETGDVDGAVEDLRRVLEADPGDPHAQNALGYTLVDHK
HHHCCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHCCCHHHHHHH
RDLSEARELIESALEQEPDNAAFLDSKGWLLYREGDPEAALEYLRRAFDQDPHGEIGAHL
HHHHHHHHHHHHHHHCCCCCCEEECCCCEEEEECCCHHHHHHHHHHHHCCCCCCHHHHHH
GEVLWELGERNEAREVWCRALDADGGQRALKRTLERYEVDVDDR
HHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7883699; 10984043 [H]