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The map label for this gene is ybhB [H]

Identifier: 121997748

GI number: 121997748

Start: 1030291

End: 1030920

Strand: Reverse

Name: ybhB [H]

Synonym: Hhal_0957

Alternate gene names: 121997748

Gene position: 1030920-1030291 (Counterclockwise)

Preceding gene: 121997750

Following gene: 121997735

Centisome position: 38.49

GC content: 69.21

Gene sequence:

>630_bases
ATGCGCCTGACCAGTCAGAGCCTCACCGACGGGCAACCGGTCCCCGAGGCGTACGCCTTCGGCATCCCGGACGCCGACAA
CCACATGGCCCTGGGCCGTAACGTCAGCCCCCATATCGGATGGTCGGATCTGCCGGCCGGGACCCGGTCGCTGGTGCTGG
TCTGCCACGACCCGGATGCGCCGAGCCACGCCGGCGATGTGAACCGGGAAGATCGGGAGATCCCCTCGGATCTGCCGCGG
GTCGACTTCTACCACTGGCTGCTGGTGGATGTCGATCCGGCCCTGGGCGAGCTGGCCGAGGGCGCCTTCTCCGAGGGGGT
GCTCCCCGGTGGCAAGTACGTGCCCGAAGGGCCCCACGGCACCCGCCAGGGGGTCAACGACTACACGGATTTCCTGGCCG
GCAGTGACGAGATGCGCGGGACCTATTACGGCTACGACGGGCCCTGCCCGCCGTGGAACGATTCGATCCCGCACCGCTAC
GTCTTCACCCTCTACGCCCTCGACGTGGGGCAGGCGCCGGTGGAGGCGGGCTTCCGCGGGCCCGATCTGCTCGAGGCCAT
CCGCCCGCACATCCTCGATCAGGCCAGCATCACCACCACCTACAGCCTCAACCCCCGCGTTCCGGCGTAG

Upstream 100 bases:

>100_bases
GATGGTGCCGTACGCGAACAGTCGCTGTTGCATCGTCACGCTGCGCCTGCCGGCTTTACAATCCCTGCGAGGGTAACCCA
AACAGCAGGAGGGGCAAGCT

Downstream 100 bases:

>100_bases
GCAGGGGGCCCGGGGGCCGCGCGGTCCCCGGGCCGGTTTCAGTCCTGCCCGTAGGGGTTATTCATGACGTCGAACCACCG
CCGATGGTGCTCGGCGGCCT

Product: PEBP family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 209; Mature: 209

Protein sequence:

>209_residues
MRLTSQSLTDGQPVPEAYAFGIPDADNHMALGRNVSPHIGWSDLPAGTRSLVLVCHDPDAPSHAGDVNREDREIPSDLPR
VDFYHWLLVDVDPALGELAEGAFSEGVLPGGKYVPEGPHGTRQGVNDYTDFLAGSDEMRGTYYGYDGPCPPWNDSIPHRY
VFTLYALDVGQAPVEAGFRGPDLLEAIRPHILDQASITTTYSLNPRVPA

Sequences:

>Translated_209_residues
MRLTSQSLTDGQPVPEAYAFGIPDADNHMALGRNVSPHIGWSDLPAGTRSLVLVCHDPDAPSHAGDVNREDREIPSDLPR
VDFYHWLLVDVDPALGELAEGAFSEGVLPGGKYVPEGPHGTRQGVNDYTDFLAGSDEMRGTYYGYDGPCPPWNDSIPHRY
VFTLYALDVGQAPVEAGFRGPDLLEAIRPHILDQASITTTYSLNPRVPA
>Mature_209_residues
MRLTSQSLTDGQPVPEAYAFGIPDADNHMALGRNVSPHIGWSDLPAGTRSLVLVCHDPDAPSHAGDVNREDREIPSDLPR
VDFYHWLLVDVDPALGELAEGAFSEGVLPGGKYVPEGPHGTRQGVNDYTDFLAGSDEMRGTYYGYDGPCPPWNDSIPHRY
VFTLYALDVGQAPVEAGFRGPDLLEAIRPHILDQASITTTYSLNPRVPA

Specific function: Unknown

COG id: COG1881

COG function: function code R; Phospholipid-binding protein

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0098 family [H]

Homologues:

Organism=Escherichia coli, GI1786990, Length=203, Percent_Identity=33.4975369458128, Blast_Score=95, Evalue=3e-21,
Organism=Escherichia coli, GI1786757, Length=204, Percent_Identity=26.4705882352941, Blast_Score=70, Evalue=9e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008914
- InterPro:   IPR005247 [H]

Pfam domain/function: PF01161 PBP [H]

EC number: NA

Molecular weight: Translated: 22737; Mature: 22737

Theoretical pI: Translated: 4.35; Mature: 4.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLTSQSLTDGQPVPEAYAFGIPDADNHMALGRNVSPHIGWSDLPAGTRSLVLVCHDPDA
CCCCCCCCCCCCCCCHHEEECCCCCCCCEEECCCCCCCCCCCCCCCCCCEEEEEECCCCC
PSHAGDVNREDREIPSDLPRVDFYHWLLVDVDPALGELAEGAFSEGVLPGGKYVPEGPHG
CCCCCCCCCCHHCCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCC
TRQGVNDYTDFLAGSDEMRGTYYGYDGPCPPWNDSIPHRYVFTLYALDVGQAPVEAGFRG
CCCCHHHHHHHHCCCCCCCCEECCCCCCCCCCCCCCCCEEEEEEEEECCCCCHHHCCCCC
PDLLEAIRPHILDQASITTTYSLNPRVPA
HHHHHHHHHHHCCCCCEEEEEECCCCCCC
>Mature Secondary Structure
MRLTSQSLTDGQPVPEAYAFGIPDADNHMALGRNVSPHIGWSDLPAGTRSLVLVCHDPDA
CCCCCCCCCCCCCCCHHEEECCCCCCCCEEECCCCCCCCCCCCCCCCCCEEEEEECCCCC
PSHAGDVNREDREIPSDLPRVDFYHWLLVDVDPALGELAEGAFSEGVLPGGKYVPEGPHG
CCCCCCCCCCHHCCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCC
TRQGVNDYTDFLAGSDEMRGTYYGYDGPCPPWNDSIPHRYVFTLYALDVGQAPVEAGFRG
CCCCHHHHHHHHCCCCCCCCEECCCCCCCCCCCCCCCCEEEEEEEEECCCCCHHHCCCCC
PDLLEAIRPHILDQASITTTYSLNPRVPA
HHHHHHHHHHHCCCCCEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3058702; 9278503; 11439028 [H]