Definition Halorhodospira halophila SL1 chromosome, complete genome.
Accession NC_008789
Length 2,678,452

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The map label for this gene is 121997664

Identifier: 121997664

GI number: 121997664

Start: 946358

End: 946903

Strand: Reverse

Name: 121997664

Synonym: Hhal_0873

Alternate gene names: NA

Gene position: 946903-946358 (Counterclockwise)

Preceding gene: 121997665

Following gene: 121997663

Centisome position: 35.35

GC content: 72.34

Gene sequence:

>546_bases
TTGACCCGTTTGCGGCCCTGGCTGGCATCGATCCTCTTGGTCGTGACGCTGCCGGTCCCGGTGGCCGCCCTGGAGCTCGT
ACCCCGGGGCGAGGGCGACGAGGGCTGTTACGCCACACCGTGGATCGCCGATCGACAGCGGGTGGCGAACCTGGTGGCGA
GCCTGCGCCAGCGTGGCCACATTGCCGGGAGCGAAGAGGGAGTTCATGAGGAACTGGTGGCCTACCGGGTGGCCGCACCG
GAGCGCCTACGGCTCGACCGCGCTCGGGAGCGCATCGACGCCGCCGAGGCGGCGGGCTTCCGGGCCGCACTGGCGCAGGG
CGTGGACGGCCGGCCCACCGTCTCCTACGGCATCCACCGGCAGCGGGCCGACGCCGACTACCACGCCGTGGCCCTGGCCC
AGGCCGGTATCGACACCACCGTCGAGCCCGTCTACCGCACGCGCCCCACCGCCCGCGCGGTGATCCGGGCCCCCGCCTCA
CGGGTGTCTGTCGTCCAGTTCGGCGAGCTATGGCGCCCGGTCCATTGCGATGCGCTTCAATGGTGA

Upstream 100 bases:

>100_bases
GTGGCGGCGAGCTAGCCGCGGGGCTGAGCCCGGCCTGGTGCCACCGTCCCTACTTGGTCCTGGAAGGACTGCTGCACTGG
AGTCGACACGAGGCCCGGCG

Downstream 100 bases:

>100_bases
TTACGATGCAGCGAGTCGGGCTGGCGTAGCTCAGTCGGTAGAGCGGCTGCCTTGTAAGCAGCGGGTCGCAGGTTCGAATC
CTGTCGCCAGCTCCAGCGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 181; Mature: 180

Protein sequence:

>181_residues
MTRLRPWLASILLVVTLPVPVAALELVPRGEGDEGCYATPWIADRQRVANLVASLRQRGHIAGSEEGVHEELVAYRVAAP
ERLRLDRARERIDAAEAAGFRAALAQGVDGRPTVSYGIHRQRADADYHAVALAQAGIDTTVEPVYRTRPTARAVIRAPAS
RVSVVQFGELWRPVHCDALQW

Sequences:

>Translated_181_residues
MTRLRPWLASILLVVTLPVPVAALELVPRGEGDEGCYATPWIADRQRVANLVASLRQRGHIAGSEEGVHEELVAYRVAAP
ERLRLDRARERIDAAEAAGFRAALAQGVDGRPTVSYGIHRQRADADYHAVALAQAGIDTTVEPVYRTRPTARAVIRAPAS
RVSVVQFGELWRPVHCDALQW
>Mature_180_residues
TRLRPWLASILLVVTLPVPVAALELVPRGEGDEGCYATPWIADRQRVANLVASLRQRGHIAGSEEGVHEELVAYRVAAPE
RLRLDRARERIDAAEAAGFRAALAQGVDGRPTVSYGIHRQRADADYHAVALAQAGIDTTVEPVYRTRPTARAVIRAPASR
VSVVQFGELWRPVHCDALQW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19887; Mature: 19756

Theoretical pI: Translated: 8.72; Mature: 8.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRLRPWLASILLVVTLPVPVAALELVPRGEGDEGCYATPWIADRQRVANLVASLRQRGH
CCCCHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHCCC
IAGSEEGVHEELVAYRVAAPERLRLDRARERIDAAEAAGFRAALAQGVDGRPTVSYGIHR
CCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCHH
QRADADYHAVALAQAGIDTTVEPVYRTRPTARAVIRAPASRVSVVQFGELWRPVHCDALQ
HHCCCCHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCC
W
C
>Mature Secondary Structure 
TRLRPWLASILLVVTLPVPVAALELVPRGEGDEGCYATPWIADRQRVANLVASLRQRGH
CCCHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHCCC
IAGSEEGVHEELVAYRVAAPERLRLDRARERIDAAEAAGFRAALAQGVDGRPTVSYGIHR
CCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCHH
QRADADYHAVALAQAGIDTTVEPVYRTRPTARAVIRAPASRVSVVQFGELWRPVHCDALQ
HHCCCCHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCC
W
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA