| Definition | Halorhodospira halophila SL1 chromosome, complete genome. |
|---|---|
| Accession | NC_008789 |
| Length | 2,678,452 |
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The map label for this gene is coaX
Identifier: 121997665
GI number: 121997665
Start: 946900
End: 947664
Strand: Reverse
Name: coaX
Synonym: Hhal_0874
Alternate gene names: 121997665
Gene position: 947664-946900 (Counterclockwise)
Preceding gene: 121997666
Following gene: 121997664
Centisome position: 35.38
GC content: 74.77
Gene sequence:
>765_bases ATGAGGCTCCTGCTCGATCTCGGCAACAGCGCGATCAAGTGGGCTGTTGTCCCGCCGGGGGGCGCGGCCTGGCAGACCGG CCGCCTGGCCTACGCCGACGGCGCCGGACCCGAGGACACGGCAGCGGCTCTGGGCGGGCGGATCCCAAGCACCGTGGCGC CGGCGCGCATCTGCGTGGCGAGCGTCCTCGCCCCGGCCTGGCAGCGGCGCTTCGATACGGCGCTGGAGCGCGCCTGGGGG GGGCCGGTTCAACACCTGGTCGCCAGCGCCGCGGCGGCTGGGGTCACCAACGGCTACGACCAGCCCGAGCAGCTCGGTGT TGACCGATGGGCCGCGCTCATCGGTGCCCGAGCTGTAGCGCCGGAGGGCGCCTGCATCGTTGATGTTGGCACGGCCATCA CCGTCGACGGACTGGACGCCGACGGCCGGCACCTCGGCGGTGCCATCTTTCCCGGCGCGCGCCTGCTGCACCAGGCCTTG GCACGCGGCACCGCGCGACTCCCCGACAGCCCAATCGGCGCCGCCGCCCTGCCGGCGCGCTCCACCGAGGAAGGCATCGC CGCAGGCGTCGCCGTCGGCGCCGGAGCAGCGGTGACCGCCCTGGCCGATGCGATCCTCGCCGCCTGCCCCCCGGGCGCGC AGCGCCTGATCACGGGGGGCGGTGGCGGCGAGCTAGCCGCGGGGCTGAGCCCGGCCTGGTGCCACCGTCCCTACTTGGTC CTGGAAGGACTGCTGCACTGGAGTCGACACGAGGCCCGGCGTTGA
Upstream 100 bases:
>100_bases TCGCCCGGGGTATCGACGAGCACGGCCGACTGCGCGTCGAGACGGACCAGGGACCGGTCGCGCTCGCCAGCGGCGAGGCC CACCTGCAGCGGAGCGCGCC
Downstream 100 bases:
>100_bases CCCGTTTGCGGCCCTGGCTGGCATCGATCCTCTTGGTCGTGACGCTGCCGGTCCCGGTGGCCGCCCTGGAGCTCGTACCC CGGGGCGAGGGCGACGAGGG
Product: pantothenate kinase
Products: NA
Alternate protein names: PanK-III; Pantothenic acid kinase
Number of amino acids: Translated: 254; Mature: 254
Protein sequence:
>254_residues MRLLLDLGNSAIKWAVVPPGGAAWQTGRLAYADGAGPEDTAAALGGRIPSTVAPARICVASVLAPAWQRRFDTALERAWG GPVQHLVASAAAAGVTNGYDQPEQLGVDRWAALIGARAVAPEGACIVDVGTAITVDGLDADGRHLGGAIFPGARLLHQAL ARGTARLPDSPIGAAALPARSTEEGIAAGVAVGAGAAVTALADAILAACPPGAQRLITGGGGGELAAGLSPAWCHRPYLV LEGLLHWSRHEARR
Sequences:
>Translated_254_residues MRLLLDLGNSAIKWAVVPPGGAAWQTGRLAYADGAGPEDTAAALGGRIPSTVAPARICVASVLAPAWQRRFDTALERAWG GPVQHLVASAAAAGVTNGYDQPEQLGVDRWAALIGARAVAPEGACIVDVGTAITVDGLDADGRHLGGAIFPGARLLHQAL ARGTARLPDSPIGAAALPARSTEEGIAAGVAVGAGAAVTALADAILAACPPGAQRLITGGGGGELAAGLSPAWCHRPYLV LEGLLHWSRHEARR >Mature_254_residues MRLLLDLGNSAIKWAVVPPGGAAWQTGRLAYADGAGPEDTAAALGGRIPSTVAPARICVASVLAPAWQRRFDTALERAWG GPVQHLVASAAAAGVTNGYDQPEQLGVDRWAALIGARAVAPEGACIVDVGTAITVDGLDADGRHLGGAIFPGARLLHQAL ARGTARLPDSPIGAAALPARSTEEGIAAGVAVGAGAAVTALADAILAACPPGAQRLITGGGGGELAAGLSPAWCHRPYLV LEGLLHWSRHEARR
Specific function: Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
COG id: COG1521
COG function: function code K; Putative transcriptional regulator, homolog of Bvg accessory factor
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the type III pantothenate kinase family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): COAX_HALHL (A1WVD8)
Other databases:
- EMBL: CP000544 - RefSeq: YP_001002452.1 - ProteinModelPortal: A1WVD8 - SMR: A1WVD8 - STRING: A1WVD8 - GeneID: 4710421 - GenomeReviews: CP000544_GR - KEGG: hha:Hhal_0874 - eggNOG: COG1521 - OMA: HLGGFIC - ProtClustDB: PRK13322 - BioCyc: HHAL349124:HHAL_0874-MONOMER - GO: GO:0005737 - HAMAP: MF_01274 - InterPro: IPR004619 - TIGRFAMs: TIGR00671
Pfam domain/function: PF03309 Bvg_acc_factor
EC number: =2.7.1.33
Molecular weight: Translated: 25587; Mature: 25587
Theoretical pI: Translated: 7.11; Mature: 7.11
Prosite motif: NA
Important sites: ACT_SITE 108-108 BINDING 99-99 BINDING 131-131 BINDING 182-182
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLLLDLGNSAIKWAVVPPGGAAWQTGRLAYADGAGPEDTAAALGGRIPSTVAPARICVA CEEEEECCCCEEEEEEECCCCCCCCCCCEEECCCCCCHHHHHHHCCCCCCHHHHHHHHHH SVLAPAWQRRFDTALERAWGGPVQHLVASAAAAGVTNGYDQPEQLGVDRWAALIGARAVA HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCC PEGACIVDVGTAITVDGLDADGRHLGGAIFPGARLLHQALARGTARLPDSPIGAAALPAR CCCCEEEEECCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC STEEGIAAGVAVGAGAAVTALADAILAACPPGAQRLITGGGGGELAAGLSPAWCHRPYLV CCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHCCCCHHHHCCHHHH LEGLLHWSRHEARR HHHHHHHHHHHCCC >Mature Secondary Structure MRLLLDLGNSAIKWAVVPPGGAAWQTGRLAYADGAGPEDTAAALGGRIPSTVAPARICVA CEEEEECCCCEEEEEEECCCCCCCCCCCEEECCCCCCHHHHHHHCCCCCCHHHHHHHHHH SVLAPAWQRRFDTALERAWGGPVQHLVASAAAAGVTNGYDQPEQLGVDRWAALIGARAVA HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCC PEGACIVDVGTAITVDGLDADGRHLGGAIFPGARLLHQALARGTARLPDSPIGAAALPAR CCCCEEEEECCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC STEEGIAAGVAVGAGAAVTALADAILAACPPGAQRLITGGGGGELAAGLSPAWCHRPYLV CCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHCCCCHHHHCCHHHH LEGLLHWSRHEARR HHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA