Definition Verminephrobacter eiseniae EF01-2 chromosome, complete genome.
Accession NC_008786
Length 5,566,749

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The map label for this gene is 121611879

Identifier: 121611879

GI number: 121611879

Start: 5512500

End: 5513606

Strand: Direct

Name: 121611879

Synonym: Veis_4982

Alternate gene names: NA

Gene position: 5512500-5513606 (Clockwise)

Preceding gene: 121611876

Following gene: 121611880

Centisome position: 99.03

GC content: 72.0

Gene sequence:

>1107_bases
ATGAGCATCTCCCCACCCGCCCCACGGCTGCGGCGCAACACGCCTGCCGGCAAAACCCCGCGCCATTTCGCCATCGTCGG
CGCGGGCATGGCAGGCATCACCTGCGCGCGCACGCTGGCGCAGGCCGGGCACGAGGTCACGGTGTTCGAGAAATCCGCCG
AGGCCGGCGGCCGCACCGCCACCATCGACACCCCGTTTGGCAGCTTTGACGCCGGTGCCCAGTATTTCACCGTGCGCGAT
CCGCGCTTTGCCCAGGCCGTGGACATGCTGCCCGGCCTGTGCAGACGCTGGAGCGCCAACGCCGTGCAAATGCTCGACGC
CGCAGGGCGCGTGACCGCCAGCGGTCTGCCCCGGCGCGAAGCGCACTGGGTGGCCAGCCCGGGCATGCAGTCGCTGGTGG
CCCGCTGGGCCGAGCCGCTGCGGCAAGCCGATCGGCTCATGACCGGCGCGCGCGTCACGCGCATCGAACCCGAGCATGAC
CCGTCCCGCGCGCCGGCCCACCCCCGATGGAAGCTGCGCACCGAAGGCCCCGATGGCAGCCGACAAAGCCATGCCGGCTT
TCATGCCGTGCTGCTGGCCCAGCCCCCGCTGCCGGCGCAGGCATTGCTCGAGAACGCGGGGCGCAGCAGCTTCCTGAGCG
ACGCGCTGGAGCCTGTCACCACGGCCCCCTGCTGGACGCTGATGCTCGCCTACCCCCAGGCCGTGCGCCCGGGCCTGACC
ACGCTCGGCCCGCAATGGAATGCCGCGCGCAGCACGCACCACCGCATTGCCTGGCTGGCGCGCGAATCGTCCAAGCCCGG
CCGCCAGGTGATCGAGCGCTGGACCGTGCAGGCCAGCCCCGTCTGGTCGGCCGAACATCTGGAAGACGACCCGGCCCGCG
TGCAGGCCAAGCTGATCAAAGCCTTTGCCGAAGTCACCGGCATCCGCGCCGAACCGGCGCATGCCGACACGCGCCGCTGG
CGCCACGCCCAAACCACCCGCCCCCTGGGCCGCAGCCATCTGTGGGACGCAGACCTGCGCCTGGGCGTCTGCGGCGACTG
GTGCCTGGGGCACCGGCTGGAAGATGCTTTCGTCTCGGGGCTGGAACTGGCGCTCGCCGTGGCCTGA

Upstream 100 bases:

>100_bases
GCTGGAAAGCCGCCGCCATTTTCAGGCGCCCGGCCTTTGCCGTGCTGTAGAGTGACCATACCCAGGTTTGGCATTGCCGC
CCGGCACCGAAAGGCCCTCC

Downstream 100 bases:

>100_bases
CGGCCGGTGTCGCCGCAGGCACAGCGCCGCCACGCGCCGGCGCAGCCCCGGCGCCGCCGGCCGTTGCGCGCGTTGCGCGA
ATTGCCGCCGGACGCACCGG

Product: FAD dependent oxidoreductase

Products: NA

Alternate protein names: Transmembrane Protein; Amine Oxidase Flavin-Containing; Deoxyribodipyrimidine Photolyase; Amine Oxidase; NAD/Fad-Dependent Oxidoreductase Protein; FAD Dependent Oxidoreductase Domain Protein; Fad Dependent Oxidoreductase

Number of amino acids: Translated: 368; Mature: 367

Protein sequence:

>368_residues
MSISPPAPRLRRNTPAGKTPRHFAIVGAGMAGITCARTLAQAGHEVTVFEKSAEAGGRTATIDTPFGSFDAGAQYFTVRD
PRFAQAVDMLPGLCRRWSANAVQMLDAAGRVTASGLPRREAHWVASPGMQSLVARWAEPLRQADRLMTGARVTRIEPEHD
PSRAPAHPRWKLRTEGPDGSRQSHAGFHAVLLAQPPLPAQALLENAGRSSFLSDALEPVTTAPCWTLMLAYPQAVRPGLT
TLGPQWNAARSTHHRIAWLARESSKPGRQVIERWTVQASPVWSAEHLEDDPARVQAKLIKAFAEVTGIRAEPAHADTRRW
RHAQTTRPLGRSHLWDADLRLGVCGDWCLGHRLEDAFVSGLELALAVA

Sequences:

>Translated_368_residues
MSISPPAPRLRRNTPAGKTPRHFAIVGAGMAGITCARTLAQAGHEVTVFEKSAEAGGRTATIDTPFGSFDAGAQYFTVRD
PRFAQAVDMLPGLCRRWSANAVQMLDAAGRVTASGLPRREAHWVASPGMQSLVARWAEPLRQADRLMTGARVTRIEPEHD
PSRAPAHPRWKLRTEGPDGSRQSHAGFHAVLLAQPPLPAQALLENAGRSSFLSDALEPVTTAPCWTLMLAYPQAVRPGLT
TLGPQWNAARSTHHRIAWLARESSKPGRQVIERWTVQASPVWSAEHLEDDPARVQAKLIKAFAEVTGIRAEPAHADTRRW
RHAQTTRPLGRSHLWDADLRLGVCGDWCLGHRLEDAFVSGLELALAVA
>Mature_367_residues
SISPPAPRLRRNTPAGKTPRHFAIVGAGMAGITCARTLAQAGHEVTVFEKSAEAGGRTATIDTPFGSFDAGAQYFTVRDP
RFAQAVDMLPGLCRRWSANAVQMLDAAGRVTASGLPRREAHWVASPGMQSLVARWAEPLRQADRLMTGARVTRIEPEHDP
SRAPAHPRWKLRTEGPDGSRQSHAGFHAVLLAQPPLPAQALLENAGRSSFLSDALEPVTTAPCWTLMLAYPQAVRPGLTT
LGPQWNAARSTHHRIAWLARESSKPGRQVIERWTVQASPVWSAEHLEDDPARVQAKLIKAFAEVTGIRAEPAHADTRRWR
HAQTTRPLGRSHLWDADLRLGVCGDWCLGHRLEDAFVSGLELALAVA

Specific function: Unknown

COG id: COG3380

COG function: function code R; Predicted NAD/FAD-dependent oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40151; Mature: 40020

Theoretical pI: Translated: 10.55; Mature: 10.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSISPPAPRLRRNTPAGKTPRHFAIVGAGMAGITCARTLAQAGHEVTVFEKSAEAGGRTA
CCCCCCCCHHHCCCCCCCCCCEEEEEECCHHHHHHHHHHHHCCCEEEEEECCCCCCCCEE
TIDTPFGSFDAGAQYFTVRDPRFAQAVDMLPGLCRRWSANAVQMLDAAGRVTASGLPRRE
EEECCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCC
AHWVASPGMQSLVARWAEPLRQADRLMTGARVTRIEPEHDPSRAPAHPRWKLRTEGPDGS
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEECCCCCC
RQSHAGFHAVLLAQPPLPAQALLENAGRSSFLSDALEPVTTAPCWTLMLAYPQAVRPGLT
CCCCCCEEEEEEECCCCCHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCH
TLGPQWNAARSTHHRIAWLARESSKPGRQVIERWTVQASPVWSAEHLEDDPARVQAKLIK
HCCCCCCCHHHHHHHEEEEECCCCCCHHHHHHHHCCCCCCCCCHHHCCCCHHHHHHHHHH
AFAEVTGIRAEPAHADTRRWRHAQTTRPLGRSHLWDADLRLGVCGDWCLGHRLEDAFVSG
HHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHH
LELALAVA
HHEEEEEC
>Mature Secondary Structure 
SISPPAPRLRRNTPAGKTPRHFAIVGAGMAGITCARTLAQAGHEVTVFEKSAEAGGRTA
CCCCCCCHHHCCCCCCCCCCEEEEEECCHHHHHHHHHHHHCCCEEEEEECCCCCCCCEE
TIDTPFGSFDAGAQYFTVRDPRFAQAVDMLPGLCRRWSANAVQMLDAAGRVTASGLPRRE
EEECCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCC
AHWVASPGMQSLVARWAEPLRQADRLMTGARVTRIEPEHDPSRAPAHPRWKLRTEGPDGS
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEECCCCCC
RQSHAGFHAVLLAQPPLPAQALLENAGRSSFLSDALEPVTTAPCWTLMLAYPQAVRPGLT
CCCCCCEEEEEEECCCCCHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCH
TLGPQWNAARSTHHRIAWLARESSKPGRQVIERWTVQASPVWSAEHLEDDPARVQAKLIK
HCCCCCCCHHHHHHHEEEEECCCCCCHHHHHHHHCCCCCCCCCHHHCCCCHHHHHHHHHH
AFAEVTGIRAEPAHADTRRWRHAQTTRPLGRSHLWDADLRLGVCGDWCLGHRLEDAFVSG
HHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHH
LELALAVA
HHEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA