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The map label for this gene is 121611880

Identifier: 121611880

GI number: 121611880

Start: 5513766

End: 5514317

Strand: Direct

Name: 121611880

Synonym: Veis_4983

Alternate gene names: NA

Gene position: 5513766-5514317 (Clockwise)

Preceding gene: 121611879

Following gene: 121611888

Centisome position: 99.05

GC content: 65.4

Gene sequence:

>552_bases
ATGAGCGACACCCCCCACCAAGAAGAAGCCCATATCGGCCCGATCAAGAACCCCAGGCAATTGCTGGCTGCGGTTCTTTT
CTCGTTTCTGATTCCGATCTTTGGCATCATTGGCCTGGTGCTGTATGTCGCGTCGGCCGACCAGCCCGCTGCCGGCGCTG
CCAATCCCGAGCGCGCCATTGCCGAGCGCCTGCAAAAGGTCGGCGCTGTCGAAATCCGCGATGCCAACCGCCCGCTCAAA
AGCGGCGAAGAGGTGTTCAAGACGCAATGCATGACCTGCCACGCCGCCGGCGTAGCGGGTGCGCCGAAATTGGGCGATAC
CGCTGCCTGGTCCGAGCGCATCAAGACCGGCCTCGATGCGCTGCTGCACTCTGCGCTCAAGGGCAAGGGGGCCATGGCCC
CGCAGGGAGGCGGCGACTTCAGTGACACCGAAATCGCCCGCGCCGTCGTTCATATGGCCAATACGGCCGGCGCCCATTTC
GAGGAACCTGCGGCCCCGGCCGCCGCAGCCAGCGCACCGGCGACCGAATCCACCGCCGCTGCCGCCAAGTAG

Upstream 100 bases:

>100_bases
GCCGTTGCGCGCGTTGCGCGAATTGCCGCCGGACGCACCGGCCCCGCAGATATACTTTCGGATTGATGACATTCAAGCCC
CCGATACTCCTGAGGACGTC

Downstream 100 bases:

>100_bases
CGCGCAGCCGGGGCACCTCCCCCGGCGTCAGCGCCTGCCCGCATCCCGCAATGCGCAGGGGCTCGGGGTGTAGCGATAGC
GTGCCGGCAGTTCCTCGGCC

Product: class I cytochrome c

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 183; Mature: 182

Protein sequence:

>183_residues
MSDTPHQEEAHIGPIKNPRQLLAAVLFSFLIPIFGIIGLVLYVASADQPAAGAANPERAIAERLQKVGAVEIRDANRPLK
SGEEVFKTQCMTCHAAGVAGAPKLGDTAAWSERIKTGLDALLHSALKGKGAMAPQGGGDFSDTEIARAVVHMANTAGAHF
EEPAAPAAAASAPATESTAAAAK

Sequences:

>Translated_183_residues
MSDTPHQEEAHIGPIKNPRQLLAAVLFSFLIPIFGIIGLVLYVASADQPAAGAANPERAIAERLQKVGAVEIRDANRPLK
SGEEVFKTQCMTCHAAGVAGAPKLGDTAAWSERIKTGLDALLHSALKGKGAMAPQGGGDFSDTEIARAVVHMANTAGAHF
EEPAAPAAAASAPATESTAAAAK
>Mature_182_residues
SDTPHQEEAHIGPIKNPRQLLAAVLFSFLIPIFGIIGLVLYVASADQPAAGAANPERAIAERLQKVGAVEIRDANRPLKS
GEEVFKTQCMTCHAAGVAGAPKLGDTAAWSERIKTGLDALLHSALKGKGAMAPQGGGDFSDTEIARAVVHMANTAGAHFE
EPAAPAAAASAPATESTAAAAK

Specific function: It is unreactive with cytochrome c reductase or oxidase but seems to function as an intermediate in nitrate respiration of facultative anaerobic pseudmonads [H]

COG id: COG3245

COG function: function code C; Cytochrome c5

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR002323 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18741; Mature: 18610

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDTPHQEEAHIGPIKNPRQLLAAVLFSFLIPIFGIIGLVLYVASADQPAAGAANPERAI
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH
AERLQKVGAVEIRDANRPLKSGEEVFKTQCMTCHAAGVAGAPKLGDTAAWSERIKTGLDA
HHHHHHCCCEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH
LLHSALKGKGAMAPQGGGDFSDTEIARAVVHMANTAGAHFEEPAAPAAAASAPATESTAA
HHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCHHH
AAK
CCC
>Mature Secondary Structure 
SDTPHQEEAHIGPIKNPRQLLAAVLFSFLIPIFGIIGLVLYVASADQPAAGAANPERAI
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH
AERLQKVGAVEIRDANRPLKSGEEVFKTQCMTCHAAGVAGAPKLGDTAAWSERIKTGLDA
HHHHHHCCCEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH
LLHSALKGKGAMAPQGGGDFSDTEIARAVVHMANTAGAHFEEPAAPAAAASAPATESTAA
HHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCHHH
AAK
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA