Definition Verminephrobacter eiseniae EF01-2 chromosome, complete genome.
Accession NC_008786
Length 5,566,749

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The map label for this gene is 121611876

Identifier: 121611876

GI number: 121611876

Start: 5509339

End: 5510163

Strand: Direct

Name: 121611876

Synonym: Veis_4979

Alternate gene names: NA

Gene position: 5509339-5510163 (Clockwise)

Preceding gene: 121611875

Following gene: 121611879

Centisome position: 98.97

GC content: 65.94

Gene sequence:

>825_bases
ATGGCCCACCCCGTCACGCATCGGATGCGCGCGCTGCGGGCGGTGGCGGGCCGGGAGATAGGCAAGTTCTTCCAGCAGCC
TGGCCGGATGCTCTCGTCGCTGGTGCGGCCCCTGCTGTGGTTTTTGGTGTTTGCCGCCGGTTTCCAGAACATCTTCGGGG
TGGCCATCATCGCGCCTTACCAGACCTATATCGAATACAAGGTCTACATGGCGCCGGGGCTGCTCGCGATGATCGCGCTG
TTCAACGGCATGCAGTCCTCGCTGGCGATGGTGTACGACCGCGAGATGGGTGTGATGCTGCTGCTGCTGACAGCCCCCCT
GCCGCGCGGCTGGCTGCTGGCCTGCAAACTGCTCGGCGGCATGTTGCTGTCCTTGCTGCAAATGCTGGCCTTCCTGCTGG
TGGCGTTAGGCTTTGGCGTGACGTTCGCATGGCAAGACCTGCCGGGCGCGCTGGCGGTGATGGCGCTGGCGGCGCTGATG
CTGGGCGCGCTCGGCCTGCTGCTATCGGTGCATGTGCGGCAGTTGGAGAACTTTGCCGGCACGATGAATTTCGTGATCTT
CCCGATGTTCTTCATCAGCTCGGCCCTCTACCCGCTGTGGAAGCTGGAGGAATCGGGCGCCACCATCGTCTACCAACTGG
CGCGCGCCAACCCGTTCACGCACGCGGTCGAAGCCATCCGCTTCGCGCTGTACGGCCAGGCGCAATGGAGCAGCCTGGCG
GTGGTGGCAGGCTGTGCGGCGCTGTTCTTCACACTCGCACTGCGGGGCTACGACCCGCAGCGCGGCGTGGCCCGGGCAGC
GCGCGACCTGCGCGCCGGCCGTTGA

Upstream 100 bases:

>100_bases
CGGCGCCGCTGGAGGGCTTCCTGCATCCGAAAAACGACCTCGACACGCTCGGTGCGGATGCCCCGGAAACAGCGTGCCGC
AAAGCCCGTTGAAGCAGGCG

Downstream 100 bases:

>100_bases
AACGGCGCCGCCACCGCTCATTCAAAGACAAAAGCCTTTCTTTTATCCAGCAGATAAGGGCGGTAATATCCGCAGCCGGG
ACTGACCGGCAACAAATCCT

Product: ABC-2 type transporter

Products: NA

Alternate protein names: Efflux ABC Transporter Permease Protein; ABC Transporter Permease Protein; ABC Transporter Permease; ABC-2 Type Transporter Superfamily; Antibiotic Export Permease Protein; ABC Efflux Transporter Permease Protein; ABC-Type Multidrug Transport System; ABC Transporter; Daunorubicin Resistance ABC Transporter Permease Protein; Transporter ABC-2 Integral Membrane Protein Family; ABC Transporter Protein

Number of amino acids: Translated: 274; Mature: 273

Protein sequence:

>274_residues
MAHPVTHRMRALRAVAGREIGKFFQQPGRMLSSLVRPLLWFLVFAAGFQNIFGVAIIAPYQTYIEYKVYMAPGLLAMIAL
FNGMQSSLAMVYDREMGVMLLLLTAPLPRGWLLACKLLGGMLLSLLQMLAFLLVALGFGVTFAWQDLPGALAVMALAALM
LGALGLLLSVHVRQLENFAGTMNFVIFPMFFISSALYPLWKLEESGATIVYQLARANPFTHAVEAIRFALYGQAQWSSLA
VVAGCAALFFTLALRGYDPQRGVARAARDLRAGR

Sequences:

>Translated_274_residues
MAHPVTHRMRALRAVAGREIGKFFQQPGRMLSSLVRPLLWFLVFAAGFQNIFGVAIIAPYQTYIEYKVYMAPGLLAMIAL
FNGMQSSLAMVYDREMGVMLLLLTAPLPRGWLLACKLLGGMLLSLLQMLAFLLVALGFGVTFAWQDLPGALAVMALAALM
LGALGLLLSVHVRQLENFAGTMNFVIFPMFFISSALYPLWKLEESGATIVYQLARANPFTHAVEAIRFALYGQAQWSSLA
VVAGCAALFFTLALRGYDPQRGVARAARDLRAGR
>Mature_273_residues
AHPVTHRMRALRAVAGREIGKFFQQPGRMLSSLVRPLLWFLVFAAGFQNIFGVAIIAPYQTYIEYKVYMAPGLLAMIALF
NGMQSSLAMVYDREMGVMLLLLTAPLPRGWLLACKLLGGMLLSLLQMLAFLLVALGFGVTFAWQDLPGALAVMALAALML
GALGLLLSVHVRQLENFAGTMNFVIFPMFFISSALYPLWKLEESGATIVYQLARANPFTHAVEAIRFALYGQAQWSSLAV
VAGCAALFFTLALRGYDPQRGVARAARDLRAGR

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30070; Mature: 29938

Theoretical pI: Translated: 10.37; Mature: 10.37

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAHPVTHRMRALRAVAGREIGKFFQQPGRMLSSLVRPLLWFLVFAAGFQNIFGVAIIAPY
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QTYIEYKVYMAPGLLAMIALFNGMQSSLAMVYDREMGVMLLLLTAPLPRGWLLACKLLGG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
MLLSLLQMLAFLLVALGFGVTFAWQDLPGALAVMALAALMLGALGLLLSVHVRQLENFAG
HHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TMNFVIFPMFFISSALYPLWKLEESGATIVYQLARANPFTHAVEAIRFALYGQAQWSSLA
HHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHCCCHHHHHHHHHHHHHCCCHHHHHH
VVAGCAALFFTLALRGYDPQRGVARAARDLRAGR
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure 
AHPVTHRMRALRAVAGREIGKFFQQPGRMLSSLVRPLLWFLVFAAGFQNIFGVAIIAPY
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QTYIEYKVYMAPGLLAMIALFNGMQSSLAMVYDREMGVMLLLLTAPLPRGWLLACKLLGG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
MLLSLLQMLAFLLVALGFGVTFAWQDLPGALAVMALAALMLGALGLLLSVHVRQLENFAG
HHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TMNFVIFPMFFISSALYPLWKLEESGATIVYQLARANPFTHAVEAIRFALYGQAQWSSLA
HHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHCCCHHHHHHHHHHHHHCCCHHHHHH
VVAGCAALFFTLALRGYDPQRGVARAARDLRAGR
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA