| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is 121611875
Identifier: 121611875
GI number: 121611875
Start: 5508110
End: 5509330
Strand: Direct
Name: 121611875
Synonym: Veis_4978
Alternate gene names: NA
Gene position: 5508110-5509330 (Clockwise)
Preceding gene: 121611874
Following gene: 121611876
Centisome position: 98.95
GC content: 69.94
Gene sequence:
>1221_bases ATGATTGAAACCGGCAGGCCGGGCATGCGCAAAAACGGGTTCCTGCGCAACGGCCGATGGGCATGGGCATGGCTGCTGGC CTGCCTGTGCTCCTGGGCCGCAGCCGCGCCGCCAGTGCGCATCGCCGTGGTGTCGCTGGCCGACGATCCGCGCTATGACC GCCGGCAGTTGGAAAAACGCTACCCGGGACACCCCGAAGGGCGTCCGCTCGATGGCGCCAAGGTCGCCGCCGCCGAATCG CGCTTCGCGCTCGATGCCATCGGCGTGACATTGGTGCTGGAGCCGATCGAAGTCCGTGCCGCCGCCGACATCGCCGCCAC CGTGAGCGATCTGCTGCGCCAGAACGTGCAGTATTTCGTGCTCGACCTGCCCGCGCCTGCCGTGGTGCAGGCCACCCGGG CCGCTGCGGCGGCGCAGGCGCTGCTGCTCAACGTCTCTGCCGACGACGACAGCTTGCGCGGCGCCGACTGCGCGCCCCAT CTGCTGCACACCCTGCCCAGTCTGCGCATGCGCAGCGACGCGCTGCTGCAATACCTGGCCGCGCGCAAATGGCGCAAGGG CCTGCTGTTGCATGGCCCGCTGCCGGCGGACCGGCAGCAGCAGGCCGCATTCCTGCAATCGGCCAAACGCTTCGGCGTGG CCTGGTCCGCGCAGCGCCCGTTCAAACTGTCCAACGACCCGCGCGAGCGCGACCTGTCCAACCTGAACCTGTTGACCACC GGGGTCGACTACGACGCCATCGTGGTCGCCGACAGCGCCGGCGAATTTGCCCGCTCGCTGCCCTATGCCAGCGCGTTGCC GCGCCCGGTGGCCGGCGCCAACGGCCTGACCGCGCAAGCCTGGCACTGGGCCTGGGAGCGCAACGGCGGGCCGCAACTGA GCCGGCGCTTTGGCAAATCGGCCGGCCGGCCGATGACCAGCTTCGACTGGGCCGCCTGGGCCGCCGTGAAAGCAGTGGTG GCAGCGGTGACGCTCTGGCCCCAAGCGGGCTTTGCCCGGCAGCGCGAGGCGCTGATCTCCGGCGAAGTGGTGCTCGACGG CTTCAAAGGGCCGCGCCTGAGCTTTCGCCCCTGGGACGGGCAATTGCGCCAGCCGCTGTTTCTGGCCCACCCCGATGGCG TGATCGCCACGGCGCCGCTGGAGGGCTTCCTGCATCCGAAAAACGACCTCGACACGCTCGGTGCGGATGCCCCGGAAACA GCGTGCCGCAAAGCCCGTTGA
Upstream 100 bases:
>100_bases GTCAATGGCCTGTCCGACGATGTGAGCGTGGTCGACACCGCAAGCAACAAGGCAATCGCCACCATCCGGGTCGGGCGGGT GCCGCATTCGGTGGTGATCG
Downstream 100 bases:
>100_bases AGCAGGCGATGGCCCACCCCGTCACGCATCGGATGCGCGCGCTGCGGGCGGTGGCGGGCCGGGAGATAGGCAAGTTCTTC CAGCAGCCTGGCCGGATGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 406; Mature: 406
Protein sequence:
>406_residues MIETGRPGMRKNGFLRNGRWAWAWLLACLCSWAAAAPPVRIAVVSLADDPRYDRRQLEKRYPGHPEGRPLDGAKVAAAES RFALDAIGVTLVLEPIEVRAAADIAATVSDLLRQNVQYFVLDLPAPAVVQATRAAAAAQALLLNVSADDDSLRGADCAPH LLHTLPSLRMRSDALLQYLAARKWRKGLLLHGPLPADRQQQAAFLQSAKRFGVAWSAQRPFKLSNDPRERDLSNLNLLTT GVDYDAIVVADSAGEFARSLPYASALPRPVAGANGLTAQAWHWAWERNGGPQLSRRFGKSAGRPMTSFDWAAWAAVKAVV AAVTLWPQAGFARQREALISGEVVLDGFKGPRLSFRPWDGQLRQPLFLAHPDGVIATAPLEGFLHPKNDLDTLGADAPET ACRKAR
Sequences:
>Translated_406_residues MIETGRPGMRKNGFLRNGRWAWAWLLACLCSWAAAAPPVRIAVVSLADDPRYDRRQLEKRYPGHPEGRPLDGAKVAAAES RFALDAIGVTLVLEPIEVRAAADIAATVSDLLRQNVQYFVLDLPAPAVVQATRAAAAAQALLLNVSADDDSLRGADCAPH LLHTLPSLRMRSDALLQYLAARKWRKGLLLHGPLPADRQQQAAFLQSAKRFGVAWSAQRPFKLSNDPRERDLSNLNLLTT GVDYDAIVVADSAGEFARSLPYASALPRPVAGANGLTAQAWHWAWERNGGPQLSRRFGKSAGRPMTSFDWAAWAAVKAVV AAVTLWPQAGFARQREALISGEVVLDGFKGPRLSFRPWDGQLRQPLFLAHPDGVIATAPLEGFLHPKNDLDTLGADAPET ACRKAR >Mature_406_residues MIETGRPGMRKNGFLRNGRWAWAWLLACLCSWAAAAPPVRIAVVSLADDPRYDRRQLEKRYPGHPEGRPLDGAKVAAAES RFALDAIGVTLVLEPIEVRAAADIAATVSDLLRQNVQYFVLDLPAPAVVQATRAAAAAQALLLNVSADDDSLRGADCAPH LLHTLPSLRMRSDALLQYLAARKWRKGLLLHGPLPADRQQQAAFLQSAKRFGVAWSAQRPFKLSNDPRERDLSNLNLLTT GVDYDAIVVADSAGEFARSLPYASALPRPVAGANGLTAQAWHWAWERNGGPQLSRRFGKSAGRPMTSFDWAAWAAVKAVV AAVTLWPQAGFARQREALISGEVVLDGFKGPRLSFRPWDGQLRQPLFLAHPDGVIATAPLEGFLHPKNDLDTLGADAPET ACRKAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44170; Mature: 44170
Theoretical pI: Translated: 10.10; Mature: 10.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIETGRPGMRKNGFLRNGRWAWAWLLACLCSWAAAAPPVRIAVVSLADDPRYDRRQLEKR CCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHH YPGHPEGRPLDGAKVAAAESRFALDAIGVTLVLEPIEVRAAADIAATVSDLLRQNVQYFV CCCCCCCCCCCCCHHHHHHHHHHHHHHCEEEEECCHHHHHHHHHHHHHHHHHHCCCEEEE LDLPAPAVVQATRAAAAAQALLLNVSADDDSLRGADCAPHLLHTLPSLRMRSDALLQYLA EECCCHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH ARKWRKGLLLHGPLPADRQQQAAFLQSAKRFGVAWSAQRPFKLSNDPRERDLSNLNLLTT HHHHHCCCEEECCCCCCHHHHHHHHHHHHHHCEEECCCCCCCCCCCCHHHHHCCCEEEEE GVDYDAIVVADSAGEFARSLPYASALPRPVAGANGLTAQAWHWAWERNGGPQLSRRFGKS CCCCCEEEEECCCHHHHHHCCCHHHCCCCCCCCCCCCCHHHEEEEECCCCHHHHHHHHHH AGRPMTSFDWAAWAAVKAVVAAVTLWPQAGFARQREALISGEVVLDGFKGPRLSFRPWDG CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCEEEECCCCCCCCCCCCCC QLRQPLFLAHPDGVIATAPLEGFLHPKNDLDTLGADAPETACRKAR CCCCCEEEECCCCEEEECCCCCCCCCCCCHHHCCCCCCHHHHHCCC >Mature Secondary Structure MIETGRPGMRKNGFLRNGRWAWAWLLACLCSWAAAAPPVRIAVVSLADDPRYDRRQLEKR CCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHH YPGHPEGRPLDGAKVAAAESRFALDAIGVTLVLEPIEVRAAADIAATVSDLLRQNVQYFV CCCCCCCCCCCCCHHHHHHHHHHHHHHCEEEEECCHHHHHHHHHHHHHHHHHHCCCEEEE LDLPAPAVVQATRAAAAAQALLLNVSADDDSLRGADCAPHLLHTLPSLRMRSDALLQYLA EECCCHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH ARKWRKGLLLHGPLPADRQQQAAFLQSAKRFGVAWSAQRPFKLSNDPRERDLSNLNLLTT HHHHHCCCEEECCCCCCHHHHHHHHHHHHHHCEEECCCCCCCCCCCCHHHHHCCCEEEEE GVDYDAIVVADSAGEFARSLPYASALPRPVAGANGLTAQAWHWAWERNGGPQLSRRFGKS CCCCCEEEEECCCHHHHHHCCCHHHCCCCCCCCCCCCCHHHEEEEECCCCHHHHHHHHHH AGRPMTSFDWAAWAAVKAVVAAVTLWPQAGFARQREALISGEVVLDGFKGPRLSFRPWDG CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCEEEECCCCCCCCCCCCCC QLRQPLFLAHPDGVIATAPLEGFLHPKNDLDTLGADAPETACRKAR CCCCCEEEECCCCEEEECCCCCCCCCCCCHHHCCCCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA