| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is 121611830
Identifier: 121611830
GI number: 121611830
Start: 5450754
End: 5451230
Strand: Direct
Name: 121611830
Synonym: Veis_4932
Alternate gene names: NA
Gene position: 5450754-5451230 (Clockwise)
Preceding gene: 121611829
Following gene: 121611831
Centisome position: 97.92
GC content: 68.97
Gene sequence:
>477_bases ATGAAAAAACTGTTTCACACGGCCGCCCTGGTGGGCGCGCTGATCAGCGGCGCTGCCCTTGCGCAGACCGCACCGGTCGA GGTCGACGGCGCCTGGGCCCGCGCCAGCACGGCGGGCCGCAAGGTCACCGGCGTCTTCATGCGCCTGACGGCCAAGGCGG ACAGCCGCCTGGTGGGCGTCGAGTCGCCCGCCGCAGGCAGCGCCGAAGTGCACGCGATGAAGCTGGAAGACGGCATCATG AAAATGCGCGCCTTGCCCGCACTCGACCTGCCCGCCGGCCAGACGGTGGAGCTCAAGCCCGGCAGCTACCATGTGATGCT GCTGGACCTGAAGGCCCCGCTGGTCCAGGACAGCACGGTGCCGATCACCCTGGTGTTTCAGGACGCCAAAGCGGCGCAAA GCCGGATCGGGTTGAGTGTGCCGGTGCGCAGCGCCGCCCCGGACGCGGCCAGCCCCGTGGATGGGCATAAACACTGA
Upstream 100 bases:
>100_bases TTTTGATAGCTGCTGGCGCAAGCGAATCAAGCGCCAGTATTTTGTCGGGCCGGCACATTCACGGCCCCGTTGGCATTCCA CCGAATAGAGAAAGATAGCC
Downstream 100 bases:
>100_bases GCGACTGAGCGCCGGCGCCCGGCGGCGCCTTCGTGGCCGCAACGCAGTGGAGTAAGCTGTGCCCCACCACAGACCCATCT CCCGCGGAGCGGCCATGAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 158; Mature: 158
Protein sequence:
>158_residues MKKLFHTAALVGALISGAALAQTAPVEVDGAWARASTAGRKVTGVFMRLTAKADSRLVGVESPAAGSAEVHAMKLEDGIM KMRALPALDLPAGQTVELKPGSYHVMLLDLKAPLVQDSTVPITLVFQDAKAAQSRIGLSVPVRSAAPDAASPVDGHKH
Sequences:
>Translated_158_residues MKKLFHTAALVGALISGAALAQTAPVEVDGAWARASTAGRKVTGVFMRLTAKADSRLVGVESPAAGSAEVHAMKLEDGIM KMRALPALDLPAGQTVELKPGSYHVMLLDLKAPLVQDSTVPITLVFQDAKAAQSRIGLSVPVRSAAPDAASPVDGHKH >Mature_158_residues MKKLFHTAALVGALISGAALAQTAPVEVDGAWARASTAGRKVTGVFMRLTAKADSRLVGVESPAAGSAEVHAMKLEDGIM KMRALPALDLPAGQTVELKPGSYHVMLLDLKAPLVQDSTVPITLVFQDAKAAQSRIGLSVPVRSAAPDAASPVDGHKH
Specific function: Unknown
COG id: COG2847
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007410 [H]
Pfam domain/function: PF04314 DUF461 [H]
EC number: NA
Molecular weight: Translated: 16354; Mature: 16354
Theoretical pI: Translated: 10.06; Mature: 10.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLFHTAALVGALISGAALAQTAPVEVDGAWARASTAGRKVTGVFMRLTAKADSRLVGV CCHHHHHHHHHHHHHCCHHHHCCCCEEECCCEEECCCCCCEEEEEEEEEEECCCCEEEEC ESPAAGSAEVHAMKLEDGIMKMRALPALDLPAGQTVELKPGSYHVMLLDLKAPLVQDSTV CCCCCCCCEEEEEECCHHHHHHHCCCCCCCCCCCEEEECCCCEEEEEEECCCCCCCCCCC PITLVFQDAKAAQSRIGLSVPVRSAAPDAASPVDGHKH EEEEEECCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKKLFHTAALVGALISGAALAQTAPVEVDGAWARASTAGRKVTGVFMRLTAKADSRLVGV CCHHHHHHHHHHHHHCCHHHHCCCCEEECCCEEECCCCCCEEEEEEEEEEECCCCEEEEC ESPAAGSAEVHAMKLEDGIMKMRALPALDLPAGQTVELKPGSYHVMLLDLKAPLVQDSTV CCCCCCCCEEEEEECCHHHHHHHCCCCCCCCCCCEEEECCCCEEEEEEECCCCCCCCCCC PITLVFQDAKAAQSRIGLSVPVRSAAPDAASPVDGHKH EEEEEECCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA