| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is 121611831
Identifier: 121611831
GI number: 121611831
Start: 5451325
End: 5452095
Strand: Direct
Name: 121611831
Synonym: Veis_4933
Alternate gene names: NA
Gene position: 5451325-5452095 (Clockwise)
Preceding gene: 121611830
Following gene: 121611832
Centisome position: 97.93
GC content: 65.5
Gene sequence:
>771_bases ATGAGCGACACACCCCACTTCGATTTCGGCAAATTCGTCCCCGGTTTCGACTTTCTGCAAAGCCTCGCCAAAGGGGCTTC GAGCAGCATGGCGCAGTTGCCCAAGCTCTCCAATTGGGTGGCGCCCACGATCGATGTGCAAGAGCTCGACAAGCGCATAC AGGAGCTCAAGGCCGTGCAGTTCTGGCTTGAGCAAAACTCCCGCGCGCTGGCGGCCACCATACAGGCGCTGGAGGTGCAG AAGATGACCCTGGCCACGCTCGAGGGCATGAACTTCAGCATCGGCGATGTGGCCAATGCCTTCAAGCCCAAGACGGCAGA CCGCGCCGGCGATGCCGCCCCGACACAGGCCGGTGCAAGCCAGGCGCAAGCCACGCCCGACGCCCCGGCGCACCCCGCCG AGCCGGTCAAGGCCCAAAGTCAGGCCCCCGGCGCAGCCGGACGAACATCCAACGCAGCCGGGCAAACATCCAGTGCAGCC GGGCAGCCCGTGGTGGACCCGTTGCAATGGTGGAGCGCGCTCACCAGCCAGTTCCAGCAGATCGCTGCCGATGCGCTGAA GGACGCCGCCAAAGGAGGTTTTGCGGCAGGTCTTGCGCAAATGCCGCAGGGCAAGCGTTCCACGACAAATGCCACCCCAA AGCCTGCCACCCCCAAGCCGGCTGCCGCCAAGAAGGCGGCGGGCAAGAAACCTGCGGTCAAGCCTGTCCCCCGATCTGCG GAGCGCAAAACCCCCGTCCGCAGCACCGCTGCGCGCCGACATGCAGGCTGA
Upstream 100 bases:
>100_bases CACTGAGCGACTGAGCGCCGGCGCCCGGCGGCGCCTTCGTGGCCGCAACGCAGTGGAGTAAGCTGTGCCCCACCACAGAC CCATCTCCCGCGGAGCGGCC
Downstream 100 bases:
>100_bases CGGGCGGATGGGTGGTCTGCCGCCCCGCCATCTCCCCCGTGGGATTCGCCTATGAAACTCTTTCCTTGCGGCCACGCCAC GCACCCCCGCTGGCGCATGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 256; Mature: 255
Protein sequence:
>256_residues MSDTPHFDFGKFVPGFDFLQSLAKGASSSMAQLPKLSNWVAPTIDVQELDKRIQELKAVQFWLEQNSRALAATIQALEVQ KMTLATLEGMNFSIGDVANAFKPKTADRAGDAAPTQAGASQAQATPDAPAHPAEPVKAQSQAPGAAGRTSNAAGQTSSAA GQPVVDPLQWWSALTSQFQQIAADALKDAAKGGFAAGLAQMPQGKRSTTNATPKPATPKPAAAKKAAGKKPAVKPVPRSA ERKTPVRSTAARRHAG
Sequences:
>Translated_256_residues MSDTPHFDFGKFVPGFDFLQSLAKGASSSMAQLPKLSNWVAPTIDVQELDKRIQELKAVQFWLEQNSRALAATIQALEVQ KMTLATLEGMNFSIGDVANAFKPKTADRAGDAAPTQAGASQAQATPDAPAHPAEPVKAQSQAPGAAGRTSNAAGQTSSAA GQPVVDPLQWWSALTSQFQQIAADALKDAAKGGFAAGLAQMPQGKRSTTNATPKPATPKPAAAKKAAGKKPAVKPVPRSA ERKTPVRSTAARRHAG >Mature_255_residues SDTPHFDFGKFVPGFDFLQSLAKGASSSMAQLPKLSNWVAPTIDVQELDKRIQELKAVQFWLEQNSRALAATIQALEVQK MTLATLEGMNFSIGDVANAFKPKTADRAGDAAPTQAGASQAQATPDAPAHPAEPVKAQSQAPGAAGRTSNAAGQTSSAAG QPVVDPLQWWSALTSQFQQIAADALKDAAKGGFAAGLAQMPQGKRSTTNATPKPATPKPAAAKKAAGKKPAVKPVPRSAE RKTPVRSTAARRHAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26629; Mature: 26498
Theoretical pI: Translated: 10.78; Mature: 10.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDTPHFDFGKFVPGFDFLQSLAKGASSSMAQLPKLSNWVAPTIDVQELDKRIQELKAVQ CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH FWLEQNSRALAATIQALEVQKMTLATLEGMNFSIGDVANAFKPKTADRAGDAAPTQAGAS HHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHCHH QAQATPDAPAHPAEPVKAQSQAPGAAGRTSNAAGQTSSAAGQPVVDPLQWWSALTSQFQQ HHCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH IAADALKDAAKGGFAAGLAQMPQGKRSTTNATPKPATPKPAAAKKAAGKKPAVKPVPRSA HHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCH ERKTPVRSTAARRHAG HHCCCHHHHHHHHCCC >Mature Secondary Structure SDTPHFDFGKFVPGFDFLQSLAKGASSSMAQLPKLSNWVAPTIDVQELDKRIQELKAVQ CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH FWLEQNSRALAATIQALEVQKMTLATLEGMNFSIGDVANAFKPKTADRAGDAAPTQAGAS HHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHCHH QAQATPDAPAHPAEPVKAQSQAPGAAGRTSNAAGQTSSAAGQPVVDPLQWWSALTSQFQQ HHCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH IAADALKDAAKGGFAAGLAQMPQGKRSTTNATPKPATPKPAAAKKAAGKKPAVKPVPRSA HHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCH ERKTPVRSTAARRHAG HHCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA