| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is 121611829
Identifier: 121611829
GI number: 121611829
Start: 5450273
End: 5450644
Strand: Direct
Name: 121611829
Synonym: Veis_4931
Alternate gene names: NA
Gene position: 5450273-5450644 (Clockwise)
Preceding gene: 121611826
Following gene: 121611830
Centisome position: 97.91
GC content: 74.73
Gene sequence:
>372_bases ATGCTGCTGTCCCCGATGCAAACCCTGCGCCGCGTTCGCTGGCTCGTCCGCTTGGTGCTGGCGGGGTTCGTCATGTCCAT CGGTGTGGCGGTGGCGTCGCCGATGCTCCATCCGCAGGCGCTGGAACTGATCTGCTCCGGCGCGGGCGCCATCGAACTGC GAGCGCACACCGATGGCGGCGCCGTGCCGCAGTCCGGCCACCAGCCCGATTGCCCTCTGTGCGTCCAGGTGGGCGCCCCG GCACCCGGGCGGCTGGCCGACCAGCCCCGGCCCCACCCCTTGGCACAGGGCCTGCGCGCCCGCGCTGCCACGCATATCGC TGCGCGCACTGCCGCGCCACTGCCGCCGCGCGGGCCCCCGGCCGGCCTCTGA
Upstream 100 bases:
>100_bases TTGTCGGGTTGTCCATGGCGGTTGCCGGGGCAAAGTCTAGCGCGCAGATCACCTGGCCTGGTGACATGGCGCCAAGCCGG GGACCTACAATCGCGGCCTC
Downstream 100 bases:
>100_bases TCAGCTGTATTTTGATAGCTGCTGGCGCAAGCGAATCAAGCGCCAGTATTTTGTCGGGCCGGCACATTCACGGCCCCGTT GGCATTCCACCGAATAGAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 123; Mature: 123
Protein sequence:
>123_residues MLLSPMQTLRRVRWLVRLVLAGFVMSIGVAVASPMLHPQALELICSGAGAIELRAHTDGGAVPQSGHQPDCPLCVQVGAP APGRLADQPRPHPLAQGLRARAATHIAARTAAPLPPRGPPAGL
Sequences:
>Translated_123_residues MLLSPMQTLRRVRWLVRLVLAGFVMSIGVAVASPMLHPQALELICSGAGAIELRAHTDGGAVPQSGHQPDCPLCVQVGAP APGRLADQPRPHPLAQGLRARAATHIAARTAAPLPPRGPPAGL >Mature_123_residues MLLSPMQTLRRVRWLVRLVLAGFVMSIGVAVASPMLHPQALELICSGAGAIELRAHTDGGAVPQSGHQPDCPLCVQVGAP APGRLADQPRPHPLAQGLRARAATHIAARTAAPLPPRGPPAGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12745; Mature: 12745
Theoretical pI: Translated: 11.85; Mature: 11.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLSPMQTLRRVRWLVRLVLAGFVMSIGVAVASPMLHPQALELICSGAGAIELRAHTDGG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEEEEEECCCC AVPQSGHQPDCPLCVQVGAPAPGRLADQPRPHPLAQGLRARAATHIAARTAAPLPPRGPP CCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCC AGL CCC >Mature Secondary Structure MLLSPMQTLRRVRWLVRLVLAGFVMSIGVAVASPMLHPQALELICSGAGAIELRAHTDGG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEEEEEECCCC AVPQSGHQPDCPLCVQVGAPAPGRLADQPRPHPLAQGLRARAATHIAARTAAPLPPRGPP CCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCC AGL CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA