| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is yieF [H]
Identifier: 121611553
GI number: 121611553
Start: 5137643
End: 5138305
Strand: Direct
Name: yieF [H]
Synonym: Veis_4645
Alternate gene names: 121611553
Gene position: 5137643-5138305 (Clockwise)
Preceding gene: 121611552
Following gene: 121611554
Centisome position: 92.29
GC content: 59.13
Gene sequence:
>663_bases ATGGGCAAATCACCTCTTCCGTTCATGACCATGACCGATCTCCAGAGGCAATCACTCCAAACGCCGATGACCGTGCTCGC CCTCAACGGCAGTTTGAGGGCGGGTTCGTTCAATGGCCACGCGCTCGCTGCAGCGGAAATTCTTGCTCCCCACGGCATGT CAATGGAATTTTCCTGCTGTACCGGCATTCCGCTCTTCAATGAAGATGAGGAAAGGCTGGGAATTCCGCCTGTTGTCGAG CTTCTGGGAGATCGAATTCGCAGCGCGAACGGCCTTGTGATCGCCAGTCCCGAATACAACTTCTCAATCAGCGGCGTGCT AAAGAACACCATCGACTGGCTGTCGCGACTTCCGTCAAGACCGCTGAAGGGCAAGCCCGTCGCGATTCTCTCGGCGACCG CAGGCGCCTTCGGCGGCGCCAGGCATCAATACGAGCTTCGCAAAGTTCTGCTCGGGCTCGATGCGCTGGTGCTGCAGCGC CCTGAAGTTCTCATTGGCAATTGCCGGGCGAAGTTCGATGAAAACGGAAACCTCACCGACGCCGCCACGCAGCAAGCAAT CGCCTCCGCGATGCAGGCCTTTGCCGCGTGGATTTCACTGCTGGAGTCAGGCAGCTCGGCCGTGACGACGGACGCGGCAA CGCACATCGCACTTGCGGTCTGA
Upstream 100 bases:
>100_bases GTGCGGCGTTGTCGGTGGCCGGCCCTGCGTTCGCGCAAGGGCAGGAGGCCCTGCCGAAGACGTCGACAGGCTATGACTTC GGCATCCGTCACGCGTTCTG
Downstream 100 bases:
>100_bases ACCTGAAGAACATCAATACAACGGAGACATCACCATGCACCTTTCTTCTACTTCCCGTCTCGCCTCCTTGCTGATGGCGG GGCTGATTTCCGTCGCTGCG
Product: NADPH-dependent FMN reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 220; Mature: 219
Protein sequence:
>220_residues MGKSPLPFMTMTDLQRQSLQTPMTVLALNGSLRAGSFNGHALAAAEILAPHGMSMEFSCCTGIPLFNEDEERLGIPPVVE LLGDRIRSANGLVIASPEYNFSISGVLKNTIDWLSRLPSRPLKGKPVAILSATAGAFGGARHQYELRKVLLGLDALVLQR PEVLIGNCRAKFDENGNLTDAATQQAIASAMQAFAAWISLLESGSSAVTTDAATHIALAV
Sequences:
>Translated_220_residues MGKSPLPFMTMTDLQRQSLQTPMTVLALNGSLRAGSFNGHALAAAEILAPHGMSMEFSCCTGIPLFNEDEERLGIPPVVE LLGDRIRSANGLVIASPEYNFSISGVLKNTIDWLSRLPSRPLKGKPVAILSATAGAFGGARHQYELRKVLLGLDALVLQR PEVLIGNCRAKFDENGNLTDAATQQAIASAMQAFAAWISLLESGSSAVTTDAATHIALAV >Mature_219_residues GKSPLPFMTMTDLQRQSLQTPMTVLALNGSLRAGSFNGHALAAAEILAPHGMSMEFSCCTGIPLFNEDEERLGIPPVVEL LGDRIRSANGLVIASPEYNFSISGVLKNTIDWLSRLPSRPLKGKPVAILSATAGAFGGARHQYELRKVLLGLDALVLQRP EVLIGNCRAKFDENGNLTDAATQQAIASAMQAFAAWISLLESGSSAVTTDAATHIALAV
Specific function: Unknown
COG id: COG0431
COG function: function code R; Predicted flavoprotein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ssuE family [H]
Homologues:
Organism=Escherichia coli, GI1790149, Length=180, Percent_Identity=43.3333333333333, Blast_Score=151, Evalue=3e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005025 [H]
Pfam domain/function: PF03358 FMN_red [H]
EC number: NA
Molecular weight: Translated: 23315; Mature: 23184
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKSPLPFMTMTDLQRQSLQTPMTVLALNGSLRAGSFNGHALAAAEILAPHGMSMEFSCC CCCCCCCCHHHHHHHHHHHCCCEEEEEECCCEECCCCCCCHHHHHHHHCCCCCCEEEHHC TGIPLFNEDEERLGIPPVVELLGDRIRSANGLVIASPEYNFSISGVLKNTIDWLSRLPSR CCCCCCCCCHHHCCCCHHHHHHHHHHHCCCCEEEECCCCCEEEHHHHHHHHHHHHHCCCC PLKGKPVAILSATAGAFGGARHQYELRKVLLGLDALVLQRPEVLIGNCRAKFDENGNLTD CCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCEEEECCCCCCCH AATQQAIASAMQAFAAWISLLESGSSAVTTDAATHIALAV HHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCHHEEEEEC >Mature Secondary Structure GKSPLPFMTMTDLQRQSLQTPMTVLALNGSLRAGSFNGHALAAAEILAPHGMSMEFSCC CCCCCCCHHHHHHHHHHHCCCEEEEEECCCEECCCCCCCHHHHHHHHCCCCCCEEEHHC TGIPLFNEDEERLGIPPVVELLGDRIRSANGLVIASPEYNFSISGVLKNTIDWLSRLPSR CCCCCCCCCHHHCCCCHHHHHHHHHHHCCCCEEEECCCCCEEEHHHHHHHHHHHHHCCCC PLKGKPVAILSATAGAFGGARHQYELRKVLLGLDALVLQRPEVLIGNCRAKFDENGNLTD CCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCEEEECCCCCCCH AATQQAIASAMQAFAAWISLLESGSSAVTTDAATHIALAV HHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCHHEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]