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The map label for this gene is omp32 [H]

Identifier: 121611552

GI number: 121611552

Start: 5136480

End: 5137643

Strand: Direct

Name: omp32 [H]

Synonym: Veis_4644

Alternate gene names: 121611552

Gene position: 5136480-5137643 (Clockwise)

Preceding gene: 121611550

Following gene: 121611553

Centisome position: 92.27

GC content: 60.48

Gene sequence:

>1164_bases
GTGAAAAGATCCCTCGTCGCCCTGGCTGCCTTGGCCATCACCGGTTCCGCATCGGCTCAGTCTTCCATCACGATGTTCGG
TGTGGTGGATGCAGGTATCAGCTACTACGCAAACGAGAACACCGCAGGTGTCACGGCCAGTCAGAAAGCTGTCTCCAACT
CAGGGTACAACGCCAGCCGCTTCGGCTTTCGTGGGACTGAGGACCTTGGCGGTGGTCTGGCCGCCAGTTTCTGGCTCGAA
GCGCCGATCACCAACGATGACGGTCAGGGCATCTTGATGTTTTCCCGTCGATCGACGGTGAGCATATCGGGCGGCTTTGG
TGAAATCCGAGCAGGCCGCGACTACACGCCGACGTTCCGAAACGACGTTGTGTTCGATCCGTTCTTCACGGCCGGCGTGG
GCGCCAACATGCTCTATTTGGCGAATCACGGCTTTGGCAAATGGCTCGCAGGCACACCCGCAACCGGCAGCACCTATGTT
CGATCGGGCAACAGCGTTGGCTATTTCTTGCCTCCGAACCTCGGCGGCTTCTATGGCCAGGTGATGTACTCCTTCAACGA
GCGCGAAAAGTTCGATCCGGGTACGGCGACGCCGGCCACATTGCACACGCAGCGCACCGGTCGCTACCTCGGCGGCCGTG
CGGGCTATGCCAATGGACCGCTGGATGTCGCCGCCTCCTACAGCAGCGCCATCATCGGGGATGATTTCTACGCAGGAACC
ACTACCGCAGTGAAGACCTGGAATCTCGGCGCGTCGTACGACTTCGGTGTTGCGAAGCTGATGGGAGAGTACTCGAGTGC
CAAGAAATCCGTTGATTCGGCACGCCCGTGGGTTTCGGCGCCAGACAATGGGCTCAAAGGCTATCTCATGGGCGTCACTG
TTCCGATTGGACCTGGGCTGATCCGTGCGTCGTACTCACAAGTCAAGTACGACCAGAATCAGCCATCCGGGTCGAATGCG
GCCAAGAATCCGCAGGCCGGCAAGTTCGCACTCGGCTATGTACACAACCTGTCGAAGCGCACGGCGCTGTACGCAGCGGT
GGCCCGCTTGAGCAACAAGCACGGTGCGGCGTTGTCGGTGGCCGGCCCTGCGTTCGCGCAAGGGCAGGAGGCCCTGCCGA
AGACGTCGACAGGCTATGACTTCGGCATCCGTCACGCGTTCTGA

Upstream 100 bases:

>100_bases
CCCATCTGCCGCCTCCAGTCCTCTTCTTCGGACGTACATATCAGCATGGCCTGAATTGCAAAGCGCGCATTTTGGCTTTT
CCCCCTCAGAAAGACTCGCA

Downstream 100 bases:

>100_bases
TGGGCAAATCACCTCTTCCGTTCATGACCATGACCGATCTCCAGAGGCAATCACTCCAAACGCCGATGACCGTGCTCGCC
CTCAACGGCAGTTTGAGGGC

Product: porin

Products: NA

Alternate protein names: OMP32 [H]

Number of amino acids: Translated: 387; Mature: 387

Protein sequence:

>387_residues
MKRSLVALAALAITGSASAQSSITMFGVVDAGISYYANENTAGVTASQKAVSNSGYNASRFGFRGTEDLGGGLAASFWLE
APITNDDGQGILMFSRRSTVSISGGFGEIRAGRDYTPTFRNDVVFDPFFTAGVGANMLYLANHGFGKWLAGTPATGSTYV
RSGNSVGYFLPPNLGGFYGQVMYSFNEREKFDPGTATPATLHTQRTGRYLGGRAGYANGPLDVAASYSSAIIGDDFYAGT
TTAVKTWNLGASYDFGVAKLMGEYSSAKKSVDSARPWVSAPDNGLKGYLMGVTVPIGPGLIRASYSQVKYDQNQPSGSNA
AKNPQAGKFALGYVHNLSKRTALYAAVARLSNKHGAALSVAGPAFAQGQEALPKTSTGYDFGIRHAF

Sequences:

>Translated_387_residues
MKRSLVALAALAITGSASAQSSITMFGVVDAGISYYANENTAGVTASQKAVSNSGYNASRFGFRGTEDLGGGLAASFWLE
APITNDDGQGILMFSRRSTVSISGGFGEIRAGRDYTPTFRNDVVFDPFFTAGVGANMLYLANHGFGKWLAGTPATGSTYV
RSGNSVGYFLPPNLGGFYGQVMYSFNEREKFDPGTATPATLHTQRTGRYLGGRAGYANGPLDVAASYSSAIIGDDFYAGT
TTAVKTWNLGASYDFGVAKLMGEYSSAKKSVDSARPWVSAPDNGLKGYLMGVTVPIGPGLIRASYSQVKYDQNQPSGSNA
AKNPQAGKFALGYVHNLSKRTALYAAVARLSNKHGAALSVAGPAFAQGQEALPKTSTGYDFGIRHAF
>Mature_387_residues
MKRSLVALAALAITGSASAQSSITMFGVVDAGISYYANENTAGVTASQKAVSNSGYNASRFGFRGTEDLGGGLAASFWLE
APITNDDGQGILMFSRRSTVSISGGFGEIRAGRDYTPTFRNDVVFDPFFTAGVGANMLYLANHGFGKWLAGTPATGSTYV
RSGNSVGYFLPPNLGGFYGQVMYSFNEREKFDPGTATPATLHTQRTGRYLGGRAGYANGPLDVAASYSSAIIGDDFYAGT
TTAVKTWNLGASYDFGVAKLMGEYSSAKKSVDSARPWVSAPDNGLKGYLMGVTVPIGPGLIRASYSQVKYDQNQPSGSNA
AKNPQAGKFALGYVHNLSKRTALYAAVARLSNKHGAALSVAGPAFAQGQEALPKTSTGYDFGIRHAF

Specific function: Forms anion selective channels [H]

COG id: COG3203

COG function: function code M; Outer membrane protein (porin)

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 40600; Mature: 40600

Theoretical pI: Translated: 9.77; Mature: 9.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRSLVALAALAITGSASAQSSITMFGVVDAGISYYANENTAGVTASQKAVSNSGYNASR
CCCHHEEHHHHHEECCCCCCCCEEEEEEEECCEEEEECCCCCCCCHHHHHHCCCCCCCCC
FGFRGTEDLGGGLAASFWLEAPITNDDGQGILMFSRRSTVSISGGFGEIRAGRDYTPTFR
CCCCCCHHHCCCEEEEEEEECCCCCCCCCEEEEEECCCEEEEECCCCEECCCCCCCCCCC
NDVVFDPFFTAGVGANMLYLANHGFGKWLAGTPATGSTYVRSGNSVGYFLPPNLGGFYGQ
CCEEECCHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCEEECCCCEEEEECCCCCCHHHH
VMYSFNEREKFDPGTATPATLHTQRTGRYLGGRAGYANGPLDVAASYSSAIIGDDFYAGT
HHHHCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHCCCCCEEECCCCCCCC
TTAVKTWNLGASYDFGVAKLMGEYSSAKKSVDSARPWVSAPDNGLKGYLMGVTVPIGPGL
EEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEECCCCH
IRASYSQVKYDQNQPSGSNAAKNPQAGKFALGYVHNLSKRTALYAAVARLSNKHGAALSV
HHHHHHHHEECCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCEEEE
AGPAFAQGQEALPKTSTGYDFGIRHAF
CCCCHHCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKRSLVALAALAITGSASAQSSITMFGVVDAGISYYANENTAGVTASQKAVSNSGYNASR
CCCHHEEHHHHHEECCCCCCCCEEEEEEEECCEEEEECCCCCCCCHHHHHHCCCCCCCCC
FGFRGTEDLGGGLAASFWLEAPITNDDGQGILMFSRRSTVSISGGFGEIRAGRDYTPTFR
CCCCCCHHHCCCEEEEEEEECCCCCCCCCEEEEEECCCEEEEECCCCEECCCCCCCCCCC
NDVVFDPFFTAGVGANMLYLANHGFGKWLAGTPATGSTYVRSGNSVGYFLPPNLGGFYGQ
CCEEECCHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCEEECCCCEEEEECCCCCCHHHH
VMYSFNEREKFDPGTATPATLHTQRTGRYLGGRAGYANGPLDVAASYSSAIIGDDFYAGT
HHHHCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHCCCCCEEECCCCCCCC
TTAVKTWNLGASYDFGVAKLMGEYSSAKKSVDSARPWVSAPDNGLKGYLMGVTVPIGPGL
EEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEECCCCH
IRASYSQVKYDQNQPSGSNAAKNPQAGKFALGYVHNLSKRTALYAAVARLSNKHGAALSV
HHHHHHHHEECCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCEEEE
AGPAFAQGQEALPKTSTGYDFGIRHAF
CCCCHHCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1848840 [H]