Definition Verminephrobacter eiseniae EF01-2 chromosome, complete genome.
Accession NC_008786
Length 5,566,749

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The map label for this gene is 121611258

Identifier: 121611258

GI number: 121611258

Start: 4786204

End: 4788744

Strand: Direct

Name: 121611258

Synonym: Veis_4344

Alternate gene names: NA

Gene position: 4786204-4788744 (Clockwise)

Preceding gene: 121611256

Following gene: 121611259

Centisome position: 85.98

GC content: 63.16

Gene sequence:

>2541_bases
ATGACCGAAACCCGATCAACCTCTTCGCCATTTCACCGGAAAGAAAACACTATGGCCAATGTCATCACCGTTCCAGACCG
CTCCATCACGATCGGCGAAACCCAGAGAATCGCTTTCGATTTTGAGAACATAGACGCCATGGACGTCACAGGAGGCAATA
ACAGCCTCAAAGAGTGTCTGCAGCTGGACTACAGTCATGCCAATGGCCGCATAAAAGATTACAGTTGGCACTGGACGTTT
GGCCGTTGGACCGGCGAGTTCAATGCCAACCAGGGCGTGGAGTCCACCGGCAACTACATCCGCTTCGTCCGTGCCGCCTC
CGGCAGCGTACCTGCTATGGATGTCATCAGCCAAACCTTCGACATCGACACCAAGCGGCCCACGATCGTCGGCACCACCA
CGATCGATGCCCCCAGCCTGACCAGGGCCGGCCAGGTAACCACCATCACCTTTACCTTCCACGAGCGGATAACCAACTTC
ACACTGGAGGACCTGGCGATACAACAGCCGGACAGGGGCACGCTGGAAAACCTGCGCAGCACCGACGACGGCAGGACTTG
GAAGGTAGACCTGAGGGCACCGGCCAACCTGGCGGCCAACACCGAGGTGAAGGACATCCGGATCACCATCGACATGGCCG
GCATCAACGATATCCCGGGCAACGCAGGCGCGGTGCGGTCGGGGGGGACGGAATACCACACCCTCATCACCTACAACATC
GACACCAAGCCGCCCAGCGCCACCATCGCCGTCACACCCAACCCCGTCACGAACAACAACGACAGACTGGTCACCGTTAT
CATCACCTTCGACGAGGAAGTCACCGGCTTCACGGCAGACAACATCGATCTCAGCAACGCCAATGTCGGTACCCGTCCCG
GCGCCGGCCGCACAGAAACGCTGGTCCGCGCGATCGACGGCCGCCGCGCCTACTCCATCACCTACACGGCCGCTGCGGAC
ACCGAGGATGCCACCAACACCATCAGCCTGCGCAACCTCAATACCATTCGCGACGCCGCAGGCAACGTCGCAACGGTCAA
CCCCACCAGCAACAACTTCGAGATCGACACCCGGGCGCCCACGGTCACGATCGCGATGGACAAAGAGCGCCTGACCGCTG
GCGAAACCGCCACCGTCACTTTCACCTTCAGCGAGACCGTCACCGGCTTCAGCGACACTTCCATCGTCGTGGATGGCGCC
AACGGCACTCTGGGCAACCTGAGGCAGGACACAGCCGACGGCAAAATCTGGAGAGGCACTTTCACCCCCACGGCCAGCCT
GTCCAACACCCGCAGCCAGATCAGCGTGAATTACGAGGGCATCAGAGACCGCCACGGCAACAGCAACAGTGGTACGAGCA
CAGCCCGCAGCTACACCGTCGACACCGCCGTCTTTGCCATCATCAGCGCCACGGTGAACGGCAGGCAGTTGGTATTGCAG
TACAGCGATGAAACCGCGCTGGACCCGGAGCAGACCCATAACGCACCCAACGATGCGTTTGTGGTGCTGGTCGATGGCGT
GCGCAACAACGTCACCGGCGTGCTCGTGGATGCAGCGGCCAAGACCATCACGCTGACGCTCGACAGCGCCGTGACCCGGG
GCCAGCAGGTGAGCGTCGCCTACAACGACCCCAGCACCGGTGACGACCCGCAAGCGGTGCAAGAAGCCACCACCGGCACC
GACGCGGCCAGCTTCGCGGCCAAACCGGCGACCAACGTTACCCCCCCCCCCCCCCCCCGCACCGGATACATCGAATGCAT
CGAATGCGCCAGACGCACCGGACTCCGACCGCGACGGTGTGCCCAACGACCAGGAGGACCAGGCCACCGGCCTGCTGCGC
CCCGATGGCTCGGCCGGCATGGCTGGCGATGGCAACGGCGACGGTATCAAAGACAGCCAGCAGGCCGCCGTCAGTTCGAC
CCGCAGCCAGACCCTGGTGGCTGGCAGCCAGGACGGCAAGCTGATCCCCGACAGCAACGCGCGCATCAGCAAAATGGAGC
ACAGCGCAGCCCCCGCCACCATGCCCAAGGGCATGGAAATGCCCGTCGGCCTGACGTCATTCACGGTGTCGCTGGCCGAA
GGCCGCAGCACCGAGAGCTTCAGCCTGTACGCAGACCCGGCGCTCGGCGCCACCGGCTACTGGATCAAGGACAGCACCGG
CACCTGGGTGAACCTGGCCAGCGAACCCTACGGCGGCAAGGTGGCCAGCGAAGGCGGGCGCACGCGGCTGGACTTTCAGA
TCCAGGACGGCGGCCAGTACGATGCCGACGGCCAGGTCAACGGCAGCATCACCACCCCCGGGGCTGTGGCGAAAATGCCG
CTGTCCATCGTCGGGCAGGCGCCCCAGGCCGATACGCATGGCTTCTGGTATTAAAGGCACCAAGGGCTTGTGCGGGTTGC
GCGGGCGCCCAACGATGCAACACCCCATGCGACAGATGCGCAACAGGGTGCGGCGCGCCGTCGGCATACAGTCCAACGAT
TTGGAGATTGCGCAAGCGCCAACTGCTGGCGCATGAAACCCTGCTGGAAAACAACGGATAA

Upstream 100 bases:

>100_bases
CCGCAGCGCGAAATTCGTTTCCAGTTGTCAAAGATGTCACGCCGCCGGGCGGAAAAGGGGCATCACCGACACGCCTGCGC
TGTGGCGGTGACCACGGCGG

Downstream 100 bases:

>100_bases
TCCCTTGTCCACCGTTTGACGATTTCCTTGGCAATTTTTTTCAACCCCATCACGGAGAAAACATGATGACACCACAAACC
CGCCGCTTCCCCTTGCGCAC

Product: hypothetical protein

Products: NA

Alternate protein names: Pyrrolo-Quinoline Quinone; Flagellar Hook-Length Control Protein FliK; S-Layer Domain Protein; BNR Repeat-Containing Glycosyl Hydrolase; RTX xin; Cadherin Domain Protein; Outer Membrane Adhesin Like Proteiin; Outer Membrane Adhesin Like Protein

Number of amino acids: Translated: 846; Mature: 845

Protein sequence:

>846_residues
MTETRSTSSPFHRKENTMANVITVPDRSITIGETQRIAFDFENIDAMDVTGGNNSLKECLQLDYSHANGRIKDYSWHWTF
GRWTGEFNANQGVESTGNYIRFVRAASGSVPAMDVISQTFDIDTKRPTIVGTTTIDAPSLTRAGQVTTITFTFHERITNF
TLEDLAIQQPDRGTLENLRSTDDGRTWKVDLRAPANLAANTEVKDIRITIDMAGINDIPGNAGAVRSGGTEYHTLITYNI
DTKPPSATIAVTPNPVTNNNDRLVTVIITFDEEVTGFTADNIDLSNANVGTRPGAGRTETLVRAIDGRRAYSITYTAAAD
TEDATNTISLRNLNTIRDAAGNVATVNPTSNNFEIDTRAPTVTIAMDKERLTAGETATVTFTFSETVTGFSDTSIVVDGA
NGTLGNLRQDTADGKIWRGTFTPTASLSNTRSQISVNYEGIRDRHGNSNSGTSTARSYTVDTAVFAIISATVNGRQLVLQ
YSDETALDPEQTHNAPNDAFVVLVDGVRNNVTGVLVDAAAKTITLTLDSAVTRGQQVSVAYNDPSTGDDPQAVQEATTGT
DAASFAAKPATNVTPPPPPRTGYIECIECARRTGLRPRRCAQRPGGPGHRPAAPRWLGRHGWRWQRRRYQRQPAGRRQFD
PQPDPGGWQPGRQADPRQQRAHQQNGAQRSPRHHAQGHGNARRPDVIHGVAGRRPQHRELQPVRRPGARRHRLLDQGQHR
HLGEPGQRTLRRQGGQRRRAHAAGLSDPGRRPVRCRRPGQRQHHHPRGCGENAAVHRRAGAPGRYAWLLVLKAPRACAGC
AGAQRCNTPCDRCATGCGAPSAYSPTIWRLRKRQLLAHETLLENNG

Sequences:

>Translated_846_residues
MTETRSTSSPFHRKENTMANVITVPDRSITIGETQRIAFDFENIDAMDVTGGNNSLKECLQLDYSHANGRIKDYSWHWTF
GRWTGEFNANQGVESTGNYIRFVRAASGSVPAMDVISQTFDIDTKRPTIVGTTTIDAPSLTRAGQVTTITFTFHERITNF
TLEDLAIQQPDRGTLENLRSTDDGRTWKVDLRAPANLAANTEVKDIRITIDMAGINDIPGNAGAVRSGGTEYHTLITYNI
DTKPPSATIAVTPNPVTNNNDRLVTVIITFDEEVTGFTADNIDLSNANVGTRPGAGRTETLVRAIDGRRAYSITYTAAAD
TEDATNTISLRNLNTIRDAAGNVATVNPTSNNFEIDTRAPTVTIAMDKERLTAGETATVTFTFSETVTGFSDTSIVVDGA
NGTLGNLRQDTADGKIWRGTFTPTASLSNTRSQISVNYEGIRDRHGNSNSGTSTARSYTVDTAVFAIISATVNGRQLVLQ
YSDETALDPEQTHNAPNDAFVVLVDGVRNNVTGVLVDAAAKTITLTLDSAVTRGQQVSVAYNDPSTGDDPQAVQEATTGT
DAASFAAKPATNVTPPPPPRTGYIECIECARRTGLRPRRCAQRPGGPGHRPAAPRWLGRHGWRWQRRRYQRQPAGRRQFD
PQPDPGGWQPGRQADPRQQRAHQQNGAQRSPRHHAQGHGNARRPDVIHGVAGRRPQHRELQPVRRPGARRHRLLDQGQHR
HLGEPGQRTLRRQGGQRRRAHAAGLSDPGRRPVRCRRPGQRQHHHPRGCGENAAVHRRAGAPGRYAWLLVLKAPRACAGC
AGAQRCNTPCDRCATGCGAPSAYSPTIWRLRKRQLLAHETLLENNG
>Mature_845_residues
TETRSTSSPFHRKENTMANVITVPDRSITIGETQRIAFDFENIDAMDVTGGNNSLKECLQLDYSHANGRIKDYSWHWTFG
RWTGEFNANQGVESTGNYIRFVRAASGSVPAMDVISQTFDIDTKRPTIVGTTTIDAPSLTRAGQVTTITFTFHERITNFT
LEDLAIQQPDRGTLENLRSTDDGRTWKVDLRAPANLAANTEVKDIRITIDMAGINDIPGNAGAVRSGGTEYHTLITYNID
TKPPSATIAVTPNPVTNNNDRLVTVIITFDEEVTGFTADNIDLSNANVGTRPGAGRTETLVRAIDGRRAYSITYTAAADT
EDATNTISLRNLNTIRDAAGNVATVNPTSNNFEIDTRAPTVTIAMDKERLTAGETATVTFTFSETVTGFSDTSIVVDGAN
GTLGNLRQDTADGKIWRGTFTPTASLSNTRSQISVNYEGIRDRHGNSNSGTSTARSYTVDTAVFAIISATVNGRQLVLQY
SDETALDPEQTHNAPNDAFVVLVDGVRNNVTGVLVDAAAKTITLTLDSAVTRGQQVSVAYNDPSTGDDPQAVQEATTGTD
AASFAAKPATNVTPPPPPRTGYIECIECARRTGLRPRRCAQRPGGPGHRPAAPRWLGRHGWRWQRRRYQRQPAGRRQFDP
QPDPGGWQPGRQADPRQQRAHQQNGAQRSPRHHAQGHGNARRPDVIHGVAGRRPQHRELQPVRRPGARRHRLLDQGQHRH
LGEPGQRTLRRQGGQRRRAHAAGLSDPGRRPVRCRRPGQRQHHHPRGCGENAAVHRRAGAPGRYAWLLVLKAPRACAGCA
GAQRCNTPCDRCATGCGAPSAYSPTIWRLRKRQLLAHETLLENNG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 92451; Mature: 92319

Theoretical pI: Translated: 9.98; Mature: 9.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTETRSTSSPFHRKENTMANVITVPDRSITIGETQRIAFDFENIDAMDVTGGNNSLKECL
CCCCCCCCCCCHHCCCCEEEEEECCCCEEEECCCEEEEEECCCCCEEEECCCCHHHHHHH
QLDYSHANGRIKDYSWHWTFGRWTGEFNANQGVESTGNYIRFVRAASGSVPAMDVISQTF
HHHHHCCCCEEEEEEEEEEECEEECCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHH
DIDTKRPTIVGTTTIDAPSLTRAGQVTTITFTFHERITNFTLEDLAIQQPDRGTLENLRS
CCCCCCCEEEEEEECCCCCCCCCCCEEEEEEEEEHHHHCCCHHHHEECCCCCCHHHHHCC
TDDGRTWKVDLRAPANLAANTEVKDIRITIDMAGINDIPGNAGAVRSGGTEYHTLITYNI
CCCCCEEEEEECCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEEE
DTKPPSATIAVTPNPVTNNNDRLVTVIITFDEEVTGFTADNIDLSNANVGTRPGAGRTET
CCCCCCCEEEECCCCCCCCCCEEEEEEEEECCCCCCEEECCEEECCCCCCCCCCCCHHHH
LVRAIDGRRAYSITYTAAADTEDATNTISLRNLNTIRDAAGNVATVNPTSNNFEIDTRAP
HHHHHCCCEEEEEEEEECCCCCCCCCEEEECCCCHHHHCCCCEEEECCCCCCEEEECCCC
TVTIAMDKERLTAGETATVTFTFSETVTGFSDTSIVVDGANGTLGNLRQDTADGKIWRGT
EEEEEECHHHCCCCCEEEEEEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEE
FTPTASLSNTRSQISVNYEGIRDRHGNSNSGTSTARSYTVDTAVFAIISATVNGRQLVLQ
CCCCCCCCCCCEEEEEEECCHHCCCCCCCCCCCCCCEEEHHHHHHHHHHHCCCCEEEEEE
YSDETALDPEQTHNAPNDAFVVLVDGVRNNVTGVLVDAAAKTITLTLDSAVTRGQQVSVA
ECCCCCCCHHHHCCCCCCEEEEEECCCCCCCCEEEEECCCEEEEEEEHHHHCCCCEEEEE
YNDPSTGDDPQAVQEATTGTDAASFAAKPATNVTPPPPPRTGYIECIECARRTGLRPRRC
ECCCCCCCCHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHH
AQRPGGPGHRPAAPRWLGRHGWRWQRRRYQRQPAGRRQFDPQPDPGGWQPGRQADPRQQR
HCCCCCCCCCCCCCHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
AHQQNGAQRSPRHHAQGHGNARRPDVIHGVAGRRPQHRELQPVRRPGARRHRLLDQGQHR
HHHHCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCHHHCCCHHHHHHHHCCCCC
HLGEPGQRTLRRQGGQRRRAHAAGLSDPGRRPVRCRRPGQRQHHHPRGCGENAAVHRRAG
CCCCHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCC
APGRYAWLLVLKAPRACAGCAGAQRCNTPCDRCATGCGAPSAYSPTIWRLRKRQLLAHET
CCCCEEEEEEEECCCHHHCCCCCHHCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHH
LLENNG
HHCCCC
>Mature Secondary Structure 
TETRSTSSPFHRKENTMANVITVPDRSITIGETQRIAFDFENIDAMDVTGGNNSLKECL
CCCCCCCCCCHHCCCCEEEEEECCCCEEEECCCEEEEEECCCCCEEEECCCCHHHHHHH
QLDYSHANGRIKDYSWHWTFGRWTGEFNANQGVESTGNYIRFVRAASGSVPAMDVISQTF
HHHHHCCCCEEEEEEEEEEECEEECCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHH
DIDTKRPTIVGTTTIDAPSLTRAGQVTTITFTFHERITNFTLEDLAIQQPDRGTLENLRS
CCCCCCCEEEEEEECCCCCCCCCCCEEEEEEEEEHHHHCCCHHHHEECCCCCCHHHHHCC
TDDGRTWKVDLRAPANLAANTEVKDIRITIDMAGINDIPGNAGAVRSGGTEYHTLITYNI
CCCCCEEEEEECCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEEE
DTKPPSATIAVTPNPVTNNNDRLVTVIITFDEEVTGFTADNIDLSNANVGTRPGAGRTET
CCCCCCCEEEECCCCCCCCCCEEEEEEEEECCCCCCEEECCEEECCCCCCCCCCCCHHHH
LVRAIDGRRAYSITYTAAADTEDATNTISLRNLNTIRDAAGNVATVNPTSNNFEIDTRAP
HHHHHCCCEEEEEEEEECCCCCCCCCEEEECCCCHHHHCCCCEEEECCCCCCEEEECCCC
TVTIAMDKERLTAGETATVTFTFSETVTGFSDTSIVVDGANGTLGNLRQDTADGKIWRGT
EEEEEECHHHCCCCCEEEEEEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEE
FTPTASLSNTRSQISVNYEGIRDRHGNSNSGTSTARSYTVDTAVFAIISATVNGRQLVLQ
CCCCCCCCCCCEEEEEEECCHHCCCCCCCCCCCCCCEEEHHHHHHHHHHHCCCCEEEEEE
YSDETALDPEQTHNAPNDAFVVLVDGVRNNVTGVLVDAAAKTITLTLDSAVTRGQQVSVA
ECCCCCCCHHHHCCCCCCEEEEEECCCCCCCCEEEEECCCEEEEEEEHHHHCCCCEEEEE
YNDPSTGDDPQAVQEATTGTDAASFAAKPATNVTPPPPPRTGYIECIECARRTGLRPRRC
ECCCCCCCCHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHH
AQRPGGPGHRPAAPRWLGRHGWRWQRRRYQRQPAGRRQFDPQPDPGGWQPGRQADPRQQR
HCCCCCCCCCCCCCHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
AHQQNGAQRSPRHHAQGHGNARRPDVIHGVAGRRPQHRELQPVRRPGARRHRLLDQGQHR
HHHHCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCHHHCCCHHHHHHHHCCCCC
HLGEPGQRTLRRQGGQRRRAHAAGLSDPGRRPVRCRRPGQRQHHHPRGCGENAAVHRRAG
CCCCHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCC
APGRYAWLLVLKAPRACAGCAGAQRCNTPCDRCATGCGAPSAYSPTIWRLRKRQLLAHET
CCCCEEEEEEEECCCHHHCCCCCHHCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHH
LLENNG
HHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA