Definition Verminephrobacter eiseniae EF01-2 chromosome, complete genome.
Accession NC_008786
Length 5,566,749

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The map label for this gene is 121611259

Identifier: 121611259

GI number: 121611259

Start: 4788807

End: 4789592

Strand: Direct

Name: 121611259

Synonym: Veis_4345

Alternate gene names: NA

Gene position: 4788807-4789592 (Clockwise)

Preceding gene: 121611258

Following gene: 121611260

Centisome position: 86.03

GC content: 67.05

Gene sequence:

>786_bases
ATGATGACACCACAAACCCGCCGCTTCCCCTTGCGCACCGTCCTGACCATTGCCACCGTCGCCACGTTGGCGGCATGTGG
CGGCGGCGGTGGTGGCGGCGATGGCGGCAGCCCCAGCACCCCGGCGACCACCATCGACCCGACGCAATTCAAAGGCCGCT
GGGCCACCGCTGCCGCTGTGACGCCCGTGATGACCGCCGTGGTTCTGCCCGATGCCTCGGGCACGACGGCCAGCGCCTGG
TTGCTGGCCAATGATGCGAGCCGGCTGGTCAAACTGGTGCTGTTCAGCGACAGCAGCGCCAACGGCACGTCTTACACGCT
GGCGCCGACGAATACCGATGGCCAGTCCGTGCTCGGCACGGTGACGGGCACGCTGACGAGCAGCCCCAAGCGCATGTCTC
TGACCGGTGTGAGCAGCGCGGCTTTGGCGTTCGACCAAAGCGACGCGCTGGCCAAGGCGGCGGAGCAGGCCGACGCGGCC
AAAACCTGGGAGTCGATCGCCGGCGGCAATGCCCGCACCACGACCTGGACGGTGGCCAGCGACGGCGCCATCTCCGGCAG
CTCGACCACCGGTTGCAGCTTTACCGGCAAACTGACCGCGATGAGCAGCAGCAATGCCTTCAGCGCGCAGATCGCTGAAA
GCTGCTCCGACGGCGTCACCACCAACTTCAGCGGCATCGCCACGGTGGATGCGCCCAAAACCCGCCTGACCGTGACGGCG
ATCACCGCCGACACCAAGAAGGGCGTGGCGATTTTCTTTGGCGCCAAAGCAGCCGCAACGCAGTAA

Upstream 100 bases:

>100_bases
TGCTGGCGCATGAAACCCTGCTGGAAAACAACGGATAATCCCTTGTCCACCGTTTGACGATTTCCTTGGCAATTTTTTTC
AACCCCATCACGGAGAAAAC

Downstream 100 bases:

>100_bases
TGCGCCGCTGCGCTGCCCCCTGCTGGCGGGGGGGCAGCGCAGACCGGAAACCCCTCCTGGCGGGGGGTGGCAAGCACCGC
GCATGGACATCGCCTTTGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 261; Mature: 261

Protein sequence:

>261_residues
MMTPQTRRFPLRTVLTIATVATLAACGGGGGGGDGGSPSTPATTIDPTQFKGRWATAAAVTPVMTAVVLPDASGTTASAW
LLANDASRLVKLVLFSDSSANGTSYTLAPTNTDGQSVLGTVTGTLTSSPKRMSLTGVSSAALAFDQSDALAKAAEQADAA
KTWESIAGGNARTTTWTVASDGAISGSSTTGCSFTGKLTAMSSSNAFSAQIAESCSDGVTTNFSGIATVDAPKTRLTVTA
ITADTKKGVAIFFGAKAAATQ

Sequences:

>Translated_261_residues
MMTPQTRRFPLRTVLTIATVATLAACGGGGGGGDGGSPSTPATTIDPTQFKGRWATAAAVTPVMTAVVLPDASGTTASAW
LLANDASRLVKLVLFSDSSANGTSYTLAPTNTDGQSVLGTVTGTLTSSPKRMSLTGVSSAALAFDQSDALAKAAEQADAA
KTWESIAGGNARTTTWTVASDGAISGSSTTGCSFTGKLTAMSSSNAFSAQIAESCSDGVTTNFSGIATVDAPKTRLTVTA
ITADTKKGVAIFFGAKAAATQ
>Mature_261_residues
MMTPQTRRFPLRTVLTIATVATLAACGGGGGGGDGGSPSTPATTIDPTQFKGRWATAAAVTPVMTAVVLPDASGTTASAW
LLANDASRLVKLVLFSDSSANGTSYTLAPTNTDGQSVLGTVTGTLTSSPKRMSLTGVSSAALAFDQSDALAKAAEQADAA
KTWESIAGGNARTTTWTVASDGAISGSSTTGCSFTGKLTAMSSSNAFSAQIAESCSDGVTTNFSGIATVDAPKTRLTVTA
ITADTKKGVAIFFGAKAAATQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25981; Mature: 25981

Theoretical pI: Translated: 8.49; Mature: 8.49

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMTPQTRRFPLRTVLTIATVATLAACGGGGGGGDGGSPSTPATTIDPTQFKGRWATAAAV
CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHH
TPVMTAVVLPDASGTTASAWLLANDASRLVKLVLFSDSSANGTSYTLAPTNTDGQSVLGT
HHHEEEEEECCCCCCCEEEEEEECCHHHEEEEEEEECCCCCCCEEEEECCCCCCCEEEEE
VTGTLTSSPKRMSLTGVSSAALAFDQSDALAKAAEQADAAKTWESIAGGNARTTTWTVAS
EEEEECCCCCEEEEECCCCCCEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEC
DGAISGSSTTGCSFTGKLTAMSSSNAFSAQIAESCSDGVTTNFSGIATVDAPKTRLTVTA
CCCCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHCCCCCCCCCCEEEECCCCCEEEEEE
ITADTKKGVAIFFGAKAAATQ
EECCCCCCEEEEEECCCCCCC
>Mature Secondary Structure
MMTPQTRRFPLRTVLTIATVATLAACGGGGGGGDGGSPSTPATTIDPTQFKGRWATAAAV
CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHH
TPVMTAVVLPDASGTTASAWLLANDASRLVKLVLFSDSSANGTSYTLAPTNTDGQSVLGT
HHHEEEEEECCCCCCCEEEEEEECCHHHEEEEEEEECCCCCCCEEEEECCCCCCCEEEEE
VTGTLTSSPKRMSLTGVSSAALAFDQSDALAKAAEQADAAKTWESIAGGNARTTTWTVAS
EEEEECCCCCEEEEECCCCCCEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEC
DGAISGSSTTGCSFTGKLTAMSSSNAFSAQIAESCSDGVTTNFSGIATVDAPKTRLTVTA
CCCCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHCCCCCCCCCCEEEECCCCCEEEEEE
ITADTKKGVAIFFGAKAAATQ
EECCCCCCEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA