| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
Click here to switch to the map view.
The map label for this gene is 121611049
Identifier: 121611049
GI number: 121611049
Start: 4531160
End: 4531492
Strand: Direct
Name: 121611049
Synonym: Veis_4133
Alternate gene names: NA
Gene position: 4531160-4531492 (Clockwise)
Preceding gene: 121611046
Following gene: 121611054
Centisome position: 81.4
GC content: 69.97
Gene sequence:
>333_bases ATGGCCGATGTGCCCAAGGCCCACAGGTTCAACGGCCGCGAGGACATGCAGCAGACCTTGCCGCGTTATGTGGCCCGGCA CGACCACCCACTGCCGCAGTCGGCGCTGGGCCGCAAGACGCCTGTGCAGGCCATGAAGGACGACTGGCGCCAGGAGCACC CGCCTCTGCTGCACGAGCGGCCATATCCCCCGCCCGTTCGAGGCGCCGGCATGGGTGCCACGCGGCCGCCCGAAGGCGAC GGTGCTCCAGTGCGCGCCGCGCCGAAGGCCCACCCCTTCCCGCCACGCTGGCAGCAACGCGCGCGGCAAAGTGCACAGAT GTTTCAGGAATGA
Upstream 100 bases:
>100_bases CAGGCCCGGGACCCCGGGAACCAACGGCATGGTCGAGAGGATCGATGGTCGCATAGCCGCATAGCCGCATAGCCGCATAG CCGCATAGCCGCATGGCCGC
Downstream 100 bases:
>100_bases AATCAGACACTGCCGCACTGCGCTCGTCGCCGCAGCGGAACCAGGTTTCAAAGCCGCCGGATTTCAAGAAAACCGTCGGG AACGCGGGCCATCACGCCTT
Product: transposase
Products: NA
Alternate protein names: Transposase
Number of amino acids: Translated: 110; Mature: 109
Protein sequence:
>110_residues MADVPKAHRFNGREDMQQTLPRYVARHDHPLPQSALGRKTPVQAMKDDWRQEHPPLLHERPYPPPVRGAGMGATRPPEGD GAPVRAAPKAHPFPPRWQQRARQSAQMFQE
Sequences:
>Translated_110_residues MADVPKAHRFNGREDMQQTLPRYVARHDHPLPQSALGRKTPVQAMKDDWRQEHPPLLHERPYPPPVRGAGMGATRPPEGD GAPVRAAPKAHPFPPRWQQRARQSAQMFQE >Mature_109_residues ADVPKAHRFNGREDMQQTLPRYVARHDHPLPQSALGRKTPVQAMKDDWRQEHPPLLHERPYPPPVRGAGMGATRPPEGDG APVRAAPKAHPFPPRWQQRARQSAQMFQE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12522; Mature: 12391
Theoretical pI: Translated: 11.11; Mature: 11.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADVPKAHRFNGREDMQQTLPRYVARHDHPLPQSALGRKTPVQAMKDDWRQEHPPLLHER CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHCCCCCCHHHHHHHHHHCCCCCCCCC PYPPPVRGAGMGATRPPEGDGAPVRAAPKAHPFPPRWQQRARQSAQMFQE CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure ADVPKAHRFNGREDMQQTLPRYVARHDHPLPQSALGRKTPVQAMKDDWRQEHPPLLHER CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHCCCCCCHHHHHHHHHHCCCCCCCCC PYPPPVRGAGMGATRPPEGDGAPVRAAPKAHPFPPRWQQRARQSAQMFQE CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA