| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is dmfA2 [H]
Identifier: 121611046
GI number: 121611046
Start: 4527605
End: 4529902
Strand: Direct
Name: dmfA2 [H]
Synonym: Veis_4130
Alternate gene names: 121611046
Gene position: 4527605-4529902 (Clockwise)
Preceding gene: 121611045
Following gene: 121611049
Centisome position: 81.33
GC content: 71.41
Gene sequence:
>2298_bases ATGAATGACACCGGCATCGAAACCAACGCCTTCCTCGGCTATCCCGACACACTCAGCGTGCGCGCTGGCGAACGCATCCG CTTTCACCTGAGCAGCCATCTGCCCGAGGCGGACGCCAGCTTCGTGCGCCTGCGCTGCGCCGACGCCGATGCCACCGGCC CGGGCCTGAAGTACCAGGAACTGGTCTCGCCGCTGGACGGTGTGCATGCCTGCCAGTGGCACGAGGTGCCCTGCGGCTCC AGCATGTCGGTGCCCGCAGACAGCCGGCTGGCGCCGGCCGGGGCGTTTTCCTTCGGCTGCCATATCTGGCCGACGCGGCT CGGCGCCGCGCCGCAGACCGTGCTCGCGCGCTGGAATGCCGAAACCGGGTGCGGCTACGCATTGCAGGTGTCGCGCCATG GCGTGACGCTGCGCGTCGGCGGGGCCGCCGCACCGGTCGAGGTCTCGACCGGCGCCGCGCTCGACGAGCGCCGCTGGTAC TGGATCCAGGGCGGCATCGACCCGGCCAGCGGCGAACTGTTCGTGCACCAGAGCCGCCTGGCCGATGCGGTGCTGCCCGA AAAGCGCAGCGAGATGCGCGCCACGCACCCGGCCGCCGACTGGCGCCTCGATTCGCAGGGGCCGTTCACCGTGGCCGCGC ACCATGCATCGCTCGCCCCGCTGCGCACCGCCGCGCATTTCGACGGCAAGATCGAGGCGCCGCGCATCGCGGCCGGCCTG CCCGCGCCGGATGCGCTGCGCCAGATCGACGCTCCCGCGCGCGCCGGGCAGGCCGATGCGCAGCTGATCGCCTGCTGGGA CTTCTCGGTCGGCATCGACACCCTGGTGGTGACCGACCGCTCGCCCCACCGCATGCACGGCCTGCTGCACCAGTTGCCAT GCCGCGGCATGACCGGCGTGCACTGGAGCGGCGCCGTGCACGACTGGCGGCTCGCGCCGCGCGAGTACGGCGCCATCCAC TTCCACAGCGACGACATCTACGACTGCGGCTGGCCCGCCACCTTGGTGCTGGATGTGCCGCTCGACTGGCGCTCGGGCGT GCACGCGCTGCGCCTGCGGCCCGCCGCGACCCACCGGCCCGTCGACGCGCCAGCCAGGCACGCCGAGACGTTCATCACCT TCTTCGTCACGCCCGCAGCCGGCGCGCACAACCTGCGCACGGCGCGGCCGCGCGCGCCGTTGGTGCTGCTCGCGCCGAGC ATGACCTACATGGCCTACGCGAACAGCGCGCTGCGCCTGCACGCGGTGCACTTCGAGGTGCTGACCGAGCGGCTGCTGAT GCTCACGGGCGACGATGTCTACCTGCAAGAGCACCCCGAGATCGGCCAATCCACCTACGACCATCACATCGACGGCAGCG GCCGCGCCTACAGCTCGTGGCTGCGCCCGGTGCTGAACATGCGCCCGCGCGCCACGCCCGGCAACCTGGCCATCGACACC CACTTCATCGACTGGCTCGAAGAAAAGGGCATCGACTACGAGCTGATCACCGACGCCGAACTCGACCGCCAGGGCCTGGG CGCAATCGCCGGCTACCGGGTGCTGGCCACGCTCTCGCACCCCGAGTACTACAGCCAGGCCATGATGAACGCCATCATGG CCTACCAGAACGGCGGCGGCCGCCACCTCGCGCTCGGCGCCAACGGCTTTTACTGGCGCTGCGCCTGGCATCCGCAGGCG CCCGCCGCCGTCGAGGTGCGGCGCGGCATCAGCGGCACGCGCACCTGGGAGTCGCGCCCCGGCGAGGTGCACCTGGCCGG CACCGGCGAACCCGGCGCGCTCTGGCGCCACAGCGGCTTCGCGCCGCAAAAGCTCATCGGCGTCGGCTTCGCGGCCATGG TCTACGACCACGCCGGCTACTACCTGCTGACGCCCGAGGCCGCCAACCCGCGCGTGGCCTTTGCGCTGCAAGGCATCGCG CAGGGCGAGCGCATCGGCGACTACGGCGTGCGCGCCGGCGGCGCCGTGGGCATAGAAATCGACCGCTTCGATGCCGACCT GGGTTCGCCGCCGCACGCCGTGATCCTGGCCCGTTCGCACGGCCTGGGCCCGGGCGCATTGCCGACCCCCGAGGAATACC GCACCACGGTGCACGGCCTCGACGCCGAGCAAAACGCGCTGGTGCGCGCCGACATGGTGTTCTTCGAGACCGCCCGGGGC GGCGCCGTATTCGCGACCGGCTCCATCGCCTACATGCTCTCGCTCAGCCACAACGGCTACGACAACGACATCAGCCGCAT CACCACCAACGTGCTGCGGCGCTTTCTCGACCCGCGCCCGTTCGAGGCGCCGGCATGA
Upstream 100 bases:
>100_bases TCGACTCGCTCGACGCCGCCGAGTGGCATGTGTTCAGGCTGCGCTGGCAAGCGCTGACCGGCTGTGAACTCCCGCTCGAC GAAACCGGGAGCGAACGGCC
Downstream 100 bases:
>100_bases GCGACGCCCGGCCGCCCGAAGGCGCCCATGCCGGCGCCGAAGGCGAGGGTACTCCAGCGAACGCCACGCCGAAGGCCCAC CCCTTCCCGCCACGCTGGCA
Product: putative N,N-dimethylformamidase
Products: NA
Alternate protein names: N,N-dimethylformamidase heavy chain [H]
Number of amino acids: Translated: 765; Mature: 765
Protein sequence:
>765_residues MNDTGIETNAFLGYPDTLSVRAGERIRFHLSSHLPEADASFVRLRCADADATGPGLKYQELVSPLDGVHACQWHEVPCGS SMSVPADSRLAPAGAFSFGCHIWPTRLGAAPQTVLARWNAETGCGYALQVSRHGVTLRVGGAAAPVEVSTGAALDERRWY WIQGGIDPASGELFVHQSRLADAVLPEKRSEMRATHPAADWRLDSQGPFTVAAHHASLAPLRTAAHFDGKIEAPRIAAGL PAPDALRQIDAPARAGQADAQLIACWDFSVGIDTLVVTDRSPHRMHGLLHQLPCRGMTGVHWSGAVHDWRLAPREYGAIH FHSDDIYDCGWPATLVLDVPLDWRSGVHALRLRPAATHRPVDAPARHAETFITFFVTPAAGAHNLRTARPRAPLVLLAPS MTYMAYANSALRLHAVHFEVLTERLLMLTGDDVYLQEHPEIGQSTYDHHIDGSGRAYSSWLRPVLNMRPRATPGNLAIDT HFIDWLEEKGIDYELITDAELDRQGLGAIAGYRVLATLSHPEYYSQAMMNAIMAYQNGGGRHLALGANGFYWRCAWHPQA PAAVEVRRGISGTRTWESRPGEVHLAGTGEPGALWRHSGFAPQKLIGVGFAAMVYDHAGYYLLTPEAANPRVAFALQGIA QGERIGDYGVRAGGAVGIEIDRFDADLGSPPHAVILARSHGLGPGALPTPEEYRTTVHGLDAEQNALVRADMVFFETARG GAVFATGSIAYMLSLSHNGYDNDISRITTNVLRRFLDPRPFEAPA
Sequences:
>Translated_765_residues MNDTGIETNAFLGYPDTLSVRAGERIRFHLSSHLPEADASFVRLRCADADATGPGLKYQELVSPLDGVHACQWHEVPCGS SMSVPADSRLAPAGAFSFGCHIWPTRLGAAPQTVLARWNAETGCGYALQVSRHGVTLRVGGAAAPVEVSTGAALDERRWY WIQGGIDPASGELFVHQSRLADAVLPEKRSEMRATHPAADWRLDSQGPFTVAAHHASLAPLRTAAHFDGKIEAPRIAAGL PAPDALRQIDAPARAGQADAQLIACWDFSVGIDTLVVTDRSPHRMHGLLHQLPCRGMTGVHWSGAVHDWRLAPREYGAIH FHSDDIYDCGWPATLVLDVPLDWRSGVHALRLRPAATHRPVDAPARHAETFITFFVTPAAGAHNLRTARPRAPLVLLAPS MTYMAYANSALRLHAVHFEVLTERLLMLTGDDVYLQEHPEIGQSTYDHHIDGSGRAYSSWLRPVLNMRPRATPGNLAIDT HFIDWLEEKGIDYELITDAELDRQGLGAIAGYRVLATLSHPEYYSQAMMNAIMAYQNGGGRHLALGANGFYWRCAWHPQA PAAVEVRRGISGTRTWESRPGEVHLAGTGEPGALWRHSGFAPQKLIGVGFAAMVYDHAGYYLLTPEAANPRVAFALQGIA QGERIGDYGVRAGGAVGIEIDRFDADLGSPPHAVILARSHGLGPGALPTPEEYRTTVHGLDAEQNALVRADMVFFETARG GAVFATGSIAYMLSLSHNGYDNDISRITTNVLRRFLDPRPFEAPA >Mature_765_residues MNDTGIETNAFLGYPDTLSVRAGERIRFHLSSHLPEADASFVRLRCADADATGPGLKYQELVSPLDGVHACQWHEVPCGS SMSVPADSRLAPAGAFSFGCHIWPTRLGAAPQTVLARWNAETGCGYALQVSRHGVTLRVGGAAAPVEVSTGAALDERRWY WIQGGIDPASGELFVHQSRLADAVLPEKRSEMRATHPAADWRLDSQGPFTVAAHHASLAPLRTAAHFDGKIEAPRIAAGL PAPDALRQIDAPARAGQADAQLIACWDFSVGIDTLVVTDRSPHRMHGLLHQLPCRGMTGVHWSGAVHDWRLAPREYGAIH FHSDDIYDCGWPATLVLDVPLDWRSGVHALRLRPAATHRPVDAPARHAETFITFFVTPAAGAHNLRTARPRAPLVLLAPS MTYMAYANSALRLHAVHFEVLTERLLMLTGDDVYLQEHPEIGQSTYDHHIDGSGRAYSSWLRPVLNMRPRATPGNLAIDT HFIDWLEEKGIDYELITDAELDRQGLGAIAGYRVLATLSHPEYYSQAMMNAIMAYQNGGGRHLALGANGFYWRCAWHPQA PAAVEVRRGISGTRTWESRPGEVHLAGTGEPGALWRHSGFAPQKLIGVGFAAMVYDHAGYYLLTPEAANPRVAFALQGIA QGERIGDYGVRAGGAVGIEIDRFDADLGSPPHAVILARSHGLGPGALPTPEEYRTTVHGLDAEQNALVRADMVFFETARG GAVFATGSIAYMLSLSHNGYDNDISRITTNVLRRFLDPRPFEAPA
Specific function: Hydrolyzes N,N-dimethylformamide, and to a lesser extent N,N-dimethylacetamide and N,N-diethylacetamide. Has no activity against the substituted amides N-methylformamide, N- ethylformamide, N-ethylformamide and N-methylacetamide or the unsubstituted amide
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008985 - InterPro: IPR013320 [H]
Pfam domain/function: NA
EC number: =3.5.1.56 [H]
Molecular weight: Translated: 83110; Mature: 83110
Theoretical pI: Translated: 6.69; Mature: 6.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDTGIETNAFLGYPDTLSVRAGERIRFHLSSHLPEADASFVRLRCADADATGPGLKYQE CCCCCCCCCEEECCCCCEEECCCCEEEEEEHHCCCCCCCCEEEEEEECCCCCCCCCCHHH LVSPLDGVHACQWHEVPCGSSMSVPADSRLAPAGAFSFGCHIWPTRLGAAPQTVLARWNA HHCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEECHHHCCCCCHHHHEECCC ETGCGYALQVSRHGVTLRVGGAAAPVEVSTGAALDERRWYWIQGGIDPASGELFVHQSRL CCCCCEEEEEECCCEEEEECCCCCCEEECCCCCCCCCEEEEEECCCCCCCCEEEEEHHHH ADAVLPEKRSEMRATHPAADWRLDSQGPFTVAAHHASLAPLRTAAHFDGKIEAPRIAAGL HHHHCCCHHHHHHCCCCCCCCEECCCCCEEEEECCCCCCCHHHHHCCCCCCCCCEEECCC PAPDALRQIDAPARAGQADAQLIACWDFSVGIDTLVVTDRSPHRMHGLLHQLPCRGMTGV CCHHHHHHCCCCCCCCCCCCEEEEEEEECCCCEEEEEECCCCHHHHHHHHHCCCCCCCCC HWSGAVHDWRLAPREYGAIHFHSDDIYDCGWPATLVLDVPLDWRSGVHALRLRPAATHRP CCCCCCCCEECCHHHCCEEEEECCCCCCCCCCEEEEEECCCCHHCCCEEEEECCCCCCCC VDAPARHAETFITFFVTPAAGAHNLRTARPRAPLVLLAPSMTYMAYANSALRLHAVHFEV CCCCHHHHCEEEEEEEECCCCCCCCCCCCCCCCEEEECCCEEEEECCCCEEEEEEHHHHH LTERLLMLTGDDVYLQEHPEIGQSTYDHHIDGSGRAYSSWLRPVLNMRPRATPGNLAIDT HHHHHEEEECCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEH HFIDWLEEKGIDYELITDAELDRQGLGAIAGYRVLATLSHPEYYSQAMMNAIMAYQNGGG HHHHHHHHCCCCEEEEECCCCCCCCCCHHHCEEEEEEECCCHHHHHHHHHHHHHHCCCCC RHLALGANGFYWRCAWHPQAPAAVEVRRGISGTRTWESRPGEVHLAGTGEPGALWRHSGF CEEEEECCCEEEEEEECCCCCCHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCEEECCCC APQKLIGVGFAAMVYDHAGYYLLTPEAANPRVAFALQGIAQGERIGDYGVRAGGAVGIEI CHHHHHHHHHHHHHHHCCCEEEECCCCCCCEEEEEEECHHCCCCCCCCCCCCCCEEEEEE DRFDADLGSPPHAVILARSHGLGPGALPTPEEYRTTVHGLDAEQNALVRADMVFFETARG EEECCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHCCCCCCCCCEEEEEEEEEEECCC GAVFATGSIAYMLSLSHNGYDNDISRITTNVLRRFLDPRPFEAPA CEEEEECCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MNDTGIETNAFLGYPDTLSVRAGERIRFHLSSHLPEADASFVRLRCADADATGPGLKYQE CCCCCCCCCEEECCCCCEEECCCCEEEEEEHHCCCCCCCCEEEEEEECCCCCCCCCCHHH LVSPLDGVHACQWHEVPCGSSMSVPADSRLAPAGAFSFGCHIWPTRLGAAPQTVLARWNA HHCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEECHHHCCCCCHHHHEECCC ETGCGYALQVSRHGVTLRVGGAAAPVEVSTGAALDERRWYWIQGGIDPASGELFVHQSRL CCCCCEEEEEECCCEEEEECCCCCCEEECCCCCCCCCEEEEEECCCCCCCCEEEEEHHHH ADAVLPEKRSEMRATHPAADWRLDSQGPFTVAAHHASLAPLRTAAHFDGKIEAPRIAAGL HHHHCCCHHHHHHCCCCCCCCEECCCCCEEEEECCCCCCCHHHHHCCCCCCCCCEEECCC PAPDALRQIDAPARAGQADAQLIACWDFSVGIDTLVVTDRSPHRMHGLLHQLPCRGMTGV CCHHHHHHCCCCCCCCCCCCEEEEEEEECCCCEEEEEECCCCHHHHHHHHHCCCCCCCCC HWSGAVHDWRLAPREYGAIHFHSDDIYDCGWPATLVLDVPLDWRSGVHALRLRPAATHRP CCCCCCCCEECCHHHCCEEEEECCCCCCCCCCEEEEEECCCCHHCCCEEEEECCCCCCCC VDAPARHAETFITFFVTPAAGAHNLRTARPRAPLVLLAPSMTYMAYANSALRLHAVHFEV CCCCHHHHCEEEEEEEECCCCCCCCCCCCCCCCEEEECCCEEEEECCCCEEEEEEHHHHH LTERLLMLTGDDVYLQEHPEIGQSTYDHHIDGSGRAYSSWLRPVLNMRPRATPGNLAIDT HHHHHEEEECCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEH HFIDWLEEKGIDYELITDAELDRQGLGAIAGYRVLATLSHPEYYSQAMMNAIMAYQNGGG HHHHHHHHCCCCEEEEECCCCCCCCCCHHHCEEEEEEECCCHHHHHHHHHHHHHHCCCCC RHLALGANGFYWRCAWHPQAPAAVEVRRGISGTRTWESRPGEVHLAGTGEPGALWRHSGF CEEEEECCCEEEEEEECCCCCCHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCEEECCCC APQKLIGVGFAAMVYDHAGYYLLTPEAANPRVAFALQGIAQGERIGDYGVRAGGAVGIEI CHHHHHHHHHHHHHHHCCCEEEECCCCCCCEEEEEEECHHCCCCCCCCCCCCCCEEEEEE DRFDADLGSPPHAVILARSHGLGPGALPTPEEYRTTVHGLDAEQNALVRADMVFFETARG EEECCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHCCCCCCCCCEEEEEEEEEEECCC GAVFATGSIAYMLSLSHNGYDNDISRITTNVLRRFLDPRPFEAPA CEEEEECCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10664842 [H]