Definition Verminephrobacter eiseniae EF01-2 chromosome, complete genome.
Accession NC_008786
Length 5,566,749

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The map label for this gene is dmfA2 [H]

Identifier: 121611046

GI number: 121611046

Start: 4527605

End: 4529902

Strand: Direct

Name: dmfA2 [H]

Synonym: Veis_4130

Alternate gene names: 121611046

Gene position: 4527605-4529902 (Clockwise)

Preceding gene: 121611045

Following gene: 121611049

Centisome position: 81.33

GC content: 71.41

Gene sequence:

>2298_bases
ATGAATGACACCGGCATCGAAACCAACGCCTTCCTCGGCTATCCCGACACACTCAGCGTGCGCGCTGGCGAACGCATCCG
CTTTCACCTGAGCAGCCATCTGCCCGAGGCGGACGCCAGCTTCGTGCGCCTGCGCTGCGCCGACGCCGATGCCACCGGCC
CGGGCCTGAAGTACCAGGAACTGGTCTCGCCGCTGGACGGTGTGCATGCCTGCCAGTGGCACGAGGTGCCCTGCGGCTCC
AGCATGTCGGTGCCCGCAGACAGCCGGCTGGCGCCGGCCGGGGCGTTTTCCTTCGGCTGCCATATCTGGCCGACGCGGCT
CGGCGCCGCGCCGCAGACCGTGCTCGCGCGCTGGAATGCCGAAACCGGGTGCGGCTACGCATTGCAGGTGTCGCGCCATG
GCGTGACGCTGCGCGTCGGCGGGGCCGCCGCACCGGTCGAGGTCTCGACCGGCGCCGCGCTCGACGAGCGCCGCTGGTAC
TGGATCCAGGGCGGCATCGACCCGGCCAGCGGCGAACTGTTCGTGCACCAGAGCCGCCTGGCCGATGCGGTGCTGCCCGA
AAAGCGCAGCGAGATGCGCGCCACGCACCCGGCCGCCGACTGGCGCCTCGATTCGCAGGGGCCGTTCACCGTGGCCGCGC
ACCATGCATCGCTCGCCCCGCTGCGCACCGCCGCGCATTTCGACGGCAAGATCGAGGCGCCGCGCATCGCGGCCGGCCTG
CCCGCGCCGGATGCGCTGCGCCAGATCGACGCTCCCGCGCGCGCCGGGCAGGCCGATGCGCAGCTGATCGCCTGCTGGGA
CTTCTCGGTCGGCATCGACACCCTGGTGGTGACCGACCGCTCGCCCCACCGCATGCACGGCCTGCTGCACCAGTTGCCAT
GCCGCGGCATGACCGGCGTGCACTGGAGCGGCGCCGTGCACGACTGGCGGCTCGCGCCGCGCGAGTACGGCGCCATCCAC
TTCCACAGCGACGACATCTACGACTGCGGCTGGCCCGCCACCTTGGTGCTGGATGTGCCGCTCGACTGGCGCTCGGGCGT
GCACGCGCTGCGCCTGCGGCCCGCCGCGACCCACCGGCCCGTCGACGCGCCAGCCAGGCACGCCGAGACGTTCATCACCT
TCTTCGTCACGCCCGCAGCCGGCGCGCACAACCTGCGCACGGCGCGGCCGCGCGCGCCGTTGGTGCTGCTCGCGCCGAGC
ATGACCTACATGGCCTACGCGAACAGCGCGCTGCGCCTGCACGCGGTGCACTTCGAGGTGCTGACCGAGCGGCTGCTGAT
GCTCACGGGCGACGATGTCTACCTGCAAGAGCACCCCGAGATCGGCCAATCCACCTACGACCATCACATCGACGGCAGCG
GCCGCGCCTACAGCTCGTGGCTGCGCCCGGTGCTGAACATGCGCCCGCGCGCCACGCCCGGCAACCTGGCCATCGACACC
CACTTCATCGACTGGCTCGAAGAAAAGGGCATCGACTACGAGCTGATCACCGACGCCGAACTCGACCGCCAGGGCCTGGG
CGCAATCGCCGGCTACCGGGTGCTGGCCACGCTCTCGCACCCCGAGTACTACAGCCAGGCCATGATGAACGCCATCATGG
CCTACCAGAACGGCGGCGGCCGCCACCTCGCGCTCGGCGCCAACGGCTTTTACTGGCGCTGCGCCTGGCATCCGCAGGCG
CCCGCCGCCGTCGAGGTGCGGCGCGGCATCAGCGGCACGCGCACCTGGGAGTCGCGCCCCGGCGAGGTGCACCTGGCCGG
CACCGGCGAACCCGGCGCGCTCTGGCGCCACAGCGGCTTCGCGCCGCAAAAGCTCATCGGCGTCGGCTTCGCGGCCATGG
TCTACGACCACGCCGGCTACTACCTGCTGACGCCCGAGGCCGCCAACCCGCGCGTGGCCTTTGCGCTGCAAGGCATCGCG
CAGGGCGAGCGCATCGGCGACTACGGCGTGCGCGCCGGCGGCGCCGTGGGCATAGAAATCGACCGCTTCGATGCCGACCT
GGGTTCGCCGCCGCACGCCGTGATCCTGGCCCGTTCGCACGGCCTGGGCCCGGGCGCATTGCCGACCCCCGAGGAATACC
GCACCACGGTGCACGGCCTCGACGCCGAGCAAAACGCGCTGGTGCGCGCCGACATGGTGTTCTTCGAGACCGCCCGGGGC
GGCGCCGTATTCGCGACCGGCTCCATCGCCTACATGCTCTCGCTCAGCCACAACGGCTACGACAACGACATCAGCCGCAT
CACCACCAACGTGCTGCGGCGCTTTCTCGACCCGCGCCCGTTCGAGGCGCCGGCATGA

Upstream 100 bases:

>100_bases
TCGACTCGCTCGACGCCGCCGAGTGGCATGTGTTCAGGCTGCGCTGGCAAGCGCTGACCGGCTGTGAACTCCCGCTCGAC
GAAACCGGGAGCGAACGGCC

Downstream 100 bases:

>100_bases
GCGACGCCCGGCCGCCCGAAGGCGCCCATGCCGGCGCCGAAGGCGAGGGTACTCCAGCGAACGCCACGCCGAAGGCCCAC
CCCTTCCCGCCACGCTGGCA

Product: putative N,N-dimethylformamidase

Products: NA

Alternate protein names: N,N-dimethylformamidase heavy chain [H]

Number of amino acids: Translated: 765; Mature: 765

Protein sequence:

>765_residues
MNDTGIETNAFLGYPDTLSVRAGERIRFHLSSHLPEADASFVRLRCADADATGPGLKYQELVSPLDGVHACQWHEVPCGS
SMSVPADSRLAPAGAFSFGCHIWPTRLGAAPQTVLARWNAETGCGYALQVSRHGVTLRVGGAAAPVEVSTGAALDERRWY
WIQGGIDPASGELFVHQSRLADAVLPEKRSEMRATHPAADWRLDSQGPFTVAAHHASLAPLRTAAHFDGKIEAPRIAAGL
PAPDALRQIDAPARAGQADAQLIACWDFSVGIDTLVVTDRSPHRMHGLLHQLPCRGMTGVHWSGAVHDWRLAPREYGAIH
FHSDDIYDCGWPATLVLDVPLDWRSGVHALRLRPAATHRPVDAPARHAETFITFFVTPAAGAHNLRTARPRAPLVLLAPS
MTYMAYANSALRLHAVHFEVLTERLLMLTGDDVYLQEHPEIGQSTYDHHIDGSGRAYSSWLRPVLNMRPRATPGNLAIDT
HFIDWLEEKGIDYELITDAELDRQGLGAIAGYRVLATLSHPEYYSQAMMNAIMAYQNGGGRHLALGANGFYWRCAWHPQA
PAAVEVRRGISGTRTWESRPGEVHLAGTGEPGALWRHSGFAPQKLIGVGFAAMVYDHAGYYLLTPEAANPRVAFALQGIA
QGERIGDYGVRAGGAVGIEIDRFDADLGSPPHAVILARSHGLGPGALPTPEEYRTTVHGLDAEQNALVRADMVFFETARG
GAVFATGSIAYMLSLSHNGYDNDISRITTNVLRRFLDPRPFEAPA

Sequences:

>Translated_765_residues
MNDTGIETNAFLGYPDTLSVRAGERIRFHLSSHLPEADASFVRLRCADADATGPGLKYQELVSPLDGVHACQWHEVPCGS
SMSVPADSRLAPAGAFSFGCHIWPTRLGAAPQTVLARWNAETGCGYALQVSRHGVTLRVGGAAAPVEVSTGAALDERRWY
WIQGGIDPASGELFVHQSRLADAVLPEKRSEMRATHPAADWRLDSQGPFTVAAHHASLAPLRTAAHFDGKIEAPRIAAGL
PAPDALRQIDAPARAGQADAQLIACWDFSVGIDTLVVTDRSPHRMHGLLHQLPCRGMTGVHWSGAVHDWRLAPREYGAIH
FHSDDIYDCGWPATLVLDVPLDWRSGVHALRLRPAATHRPVDAPARHAETFITFFVTPAAGAHNLRTARPRAPLVLLAPS
MTYMAYANSALRLHAVHFEVLTERLLMLTGDDVYLQEHPEIGQSTYDHHIDGSGRAYSSWLRPVLNMRPRATPGNLAIDT
HFIDWLEEKGIDYELITDAELDRQGLGAIAGYRVLATLSHPEYYSQAMMNAIMAYQNGGGRHLALGANGFYWRCAWHPQA
PAAVEVRRGISGTRTWESRPGEVHLAGTGEPGALWRHSGFAPQKLIGVGFAAMVYDHAGYYLLTPEAANPRVAFALQGIA
QGERIGDYGVRAGGAVGIEIDRFDADLGSPPHAVILARSHGLGPGALPTPEEYRTTVHGLDAEQNALVRADMVFFETARG
GAVFATGSIAYMLSLSHNGYDNDISRITTNVLRRFLDPRPFEAPA
>Mature_765_residues
MNDTGIETNAFLGYPDTLSVRAGERIRFHLSSHLPEADASFVRLRCADADATGPGLKYQELVSPLDGVHACQWHEVPCGS
SMSVPADSRLAPAGAFSFGCHIWPTRLGAAPQTVLARWNAETGCGYALQVSRHGVTLRVGGAAAPVEVSTGAALDERRWY
WIQGGIDPASGELFVHQSRLADAVLPEKRSEMRATHPAADWRLDSQGPFTVAAHHASLAPLRTAAHFDGKIEAPRIAAGL
PAPDALRQIDAPARAGQADAQLIACWDFSVGIDTLVVTDRSPHRMHGLLHQLPCRGMTGVHWSGAVHDWRLAPREYGAIH
FHSDDIYDCGWPATLVLDVPLDWRSGVHALRLRPAATHRPVDAPARHAETFITFFVTPAAGAHNLRTARPRAPLVLLAPS
MTYMAYANSALRLHAVHFEVLTERLLMLTGDDVYLQEHPEIGQSTYDHHIDGSGRAYSSWLRPVLNMRPRATPGNLAIDT
HFIDWLEEKGIDYELITDAELDRQGLGAIAGYRVLATLSHPEYYSQAMMNAIMAYQNGGGRHLALGANGFYWRCAWHPQA
PAAVEVRRGISGTRTWESRPGEVHLAGTGEPGALWRHSGFAPQKLIGVGFAAMVYDHAGYYLLTPEAANPRVAFALQGIA
QGERIGDYGVRAGGAVGIEIDRFDADLGSPPHAVILARSHGLGPGALPTPEEYRTTVHGLDAEQNALVRADMVFFETARG
GAVFATGSIAYMLSLSHNGYDNDISRITTNVLRRFLDPRPFEAPA

Specific function: Hydrolyzes N,N-dimethylformamide, and to a lesser extent N,N-dimethylacetamide and N,N-diethylacetamide. Has no activity against the substituted amides N-methylformamide, N- ethylformamide, N-ethylformamide and N-methylacetamide or the unsubstituted amide

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008985
- InterPro:   IPR013320 [H]

Pfam domain/function: NA

EC number: =3.5.1.56 [H]

Molecular weight: Translated: 83110; Mature: 83110

Theoretical pI: Translated: 6.69; Mature: 6.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDTGIETNAFLGYPDTLSVRAGERIRFHLSSHLPEADASFVRLRCADADATGPGLKYQE
CCCCCCCCCEEECCCCCEEECCCCEEEEEEHHCCCCCCCCEEEEEEECCCCCCCCCCHHH
LVSPLDGVHACQWHEVPCGSSMSVPADSRLAPAGAFSFGCHIWPTRLGAAPQTVLARWNA
HHCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEECHHHCCCCCHHHHEECCC
ETGCGYALQVSRHGVTLRVGGAAAPVEVSTGAALDERRWYWIQGGIDPASGELFVHQSRL
CCCCCEEEEEECCCEEEEECCCCCCEEECCCCCCCCCEEEEEECCCCCCCCEEEEEHHHH
ADAVLPEKRSEMRATHPAADWRLDSQGPFTVAAHHASLAPLRTAAHFDGKIEAPRIAAGL
HHHHCCCHHHHHHCCCCCCCCEECCCCCEEEEECCCCCCCHHHHHCCCCCCCCCEEECCC
PAPDALRQIDAPARAGQADAQLIACWDFSVGIDTLVVTDRSPHRMHGLLHQLPCRGMTGV
CCHHHHHHCCCCCCCCCCCCEEEEEEEECCCCEEEEEECCCCHHHHHHHHHCCCCCCCCC
HWSGAVHDWRLAPREYGAIHFHSDDIYDCGWPATLVLDVPLDWRSGVHALRLRPAATHRP
CCCCCCCCEECCHHHCCEEEEECCCCCCCCCCEEEEEECCCCHHCCCEEEEECCCCCCCC
VDAPARHAETFITFFVTPAAGAHNLRTARPRAPLVLLAPSMTYMAYANSALRLHAVHFEV
CCCCHHHHCEEEEEEEECCCCCCCCCCCCCCCCEEEECCCEEEEECCCCEEEEEEHHHHH
LTERLLMLTGDDVYLQEHPEIGQSTYDHHIDGSGRAYSSWLRPVLNMRPRATPGNLAIDT
HHHHHEEEECCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEH
HFIDWLEEKGIDYELITDAELDRQGLGAIAGYRVLATLSHPEYYSQAMMNAIMAYQNGGG
HHHHHHHHCCCCEEEEECCCCCCCCCCHHHCEEEEEEECCCHHHHHHHHHHHHHHCCCCC
RHLALGANGFYWRCAWHPQAPAAVEVRRGISGTRTWESRPGEVHLAGTGEPGALWRHSGF
CEEEEECCCEEEEEEECCCCCCHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCEEECCCC
APQKLIGVGFAAMVYDHAGYYLLTPEAANPRVAFALQGIAQGERIGDYGVRAGGAVGIEI
CHHHHHHHHHHHHHHHCCCEEEECCCCCCCEEEEEEECHHCCCCCCCCCCCCCCEEEEEE
DRFDADLGSPPHAVILARSHGLGPGALPTPEEYRTTVHGLDAEQNALVRADMVFFETARG
EEECCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHCCCCCCCCCEEEEEEEEEEECCC
GAVFATGSIAYMLSLSHNGYDNDISRITTNVLRRFLDPRPFEAPA
CEEEEECCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MNDTGIETNAFLGYPDTLSVRAGERIRFHLSSHLPEADASFVRLRCADADATGPGLKYQE
CCCCCCCCCEEECCCCCEEECCCCEEEEEEHHCCCCCCCCEEEEEEECCCCCCCCCCHHH
LVSPLDGVHACQWHEVPCGSSMSVPADSRLAPAGAFSFGCHIWPTRLGAAPQTVLARWNA
HHCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEECHHHCCCCCHHHHEECCC
ETGCGYALQVSRHGVTLRVGGAAAPVEVSTGAALDERRWYWIQGGIDPASGELFVHQSRL
CCCCCEEEEEECCCEEEEECCCCCCEEECCCCCCCCCEEEEEECCCCCCCCEEEEEHHHH
ADAVLPEKRSEMRATHPAADWRLDSQGPFTVAAHHASLAPLRTAAHFDGKIEAPRIAAGL
HHHHCCCHHHHHHCCCCCCCCEECCCCCEEEEECCCCCCCHHHHHCCCCCCCCCEEECCC
PAPDALRQIDAPARAGQADAQLIACWDFSVGIDTLVVTDRSPHRMHGLLHQLPCRGMTGV
CCHHHHHHCCCCCCCCCCCCEEEEEEEECCCCEEEEEECCCCHHHHHHHHHCCCCCCCCC
HWSGAVHDWRLAPREYGAIHFHSDDIYDCGWPATLVLDVPLDWRSGVHALRLRPAATHRP
CCCCCCCCEECCHHHCCEEEEECCCCCCCCCCEEEEEECCCCHHCCCEEEEECCCCCCCC
VDAPARHAETFITFFVTPAAGAHNLRTARPRAPLVLLAPSMTYMAYANSALRLHAVHFEV
CCCCHHHHCEEEEEEEECCCCCCCCCCCCCCCCEEEECCCEEEEECCCCEEEEEEHHHHH
LTERLLMLTGDDVYLQEHPEIGQSTYDHHIDGSGRAYSSWLRPVLNMRPRATPGNLAIDT
HHHHHEEEECCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEH
HFIDWLEEKGIDYELITDAELDRQGLGAIAGYRVLATLSHPEYYSQAMMNAIMAYQNGGG
HHHHHHHHCCCCEEEEECCCCCCCCCCHHHCEEEEEEECCCHHHHHHHHHHHHHHCCCCC
RHLALGANGFYWRCAWHPQAPAAVEVRRGISGTRTWESRPGEVHLAGTGEPGALWRHSGF
CEEEEECCCEEEEEEECCCCCCHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCEEECCCC
APQKLIGVGFAAMVYDHAGYYLLTPEAANPRVAFALQGIAQGERIGDYGVRAGGAVGIEI
CHHHHHHHHHHHHHHHCCCEEEECCCCCCCEEEEEEECHHCCCCCCCCCCCCCCEEEEEE
DRFDADLGSPPHAVILARSHGLGPGALPTPEEYRTTVHGLDAEQNALVRADMVFFETARG
EEECCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHCCCCCCCCCEEEEEEEEEEECCC
GAVFATGSIAYMLSLSHNGYDNDISRITTNVLRRFLDPRPFEAPA
CEEEEECCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10664842 [H]