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The map label for this gene is pqqE [H]

Identifier: 121610954

GI number: 121610954

Start: 4423928

End: 4425040

Strand: Direct

Name: pqqE [H]

Synonym: Veis_4038

Alternate gene names: 121610954

Gene position: 4423928-4425040 (Clockwise)

Preceding gene: 121610953

Following gene: 121610962

Centisome position: 79.47

GC content: 68.01

Gene sequence:

>1113_bases
TTGACCTACCGCTGCCCGCTGCACTGCGCCTTCTGCTCCAACCCGGTCGACTACATGCGCCACCGCCAGGAACTGGACTC
GGCGCAGTGGCGCCAGGTGCTGAGCCAGGCGCGCGCGCTCGGCGCCGCGCAACTGGGCCTGTCGGGCGGCGAGCCACTGC
TGCGCGACGACCTCGAAGACCTGGTCGGCCATGCCCGGCAACTGGGTTTCTACACCAACCTGATCACCTCCGGCGTGGGC
CTGACCGATGCGCGCCTGGGCGCGCTGCGCGCAGCCGGGCTCGACCATATACAACTGTCATTCCAGGACTCGACGCGGGA
ACTGAACGACTTCCTGTCGAGCACCCGCACCTTCGACCTGAAGCAGCGGGTGGCCCGGCTGATCAAGGCGCATGGCTACC
CGATGGTGCTCAACTGCGTGCTGCACCGGCACAACCTGGCCCATGTCGGCGCCATCATCGAGATGGCGCTGCAAATGGGC
GCCGAATACCTGGAACTGGCCAATACGCAGTACTACGGCTGGGCCTGGGAAAACCGGCTCGGCCTGATGCCCACCGAGGA
GCAACTGCGCACGGCCGAGGCGGTGGTCGCGACCTACCGCGCCAGGATTGGCAAGCGCTGCCGCATCCTGTACGTGGTGC
CGGACTATTTCGAGAAGCGGCCGAAAAAATGCATGAACGGCTGGGGTTCGGTATTTCTCGGGGTCGCCCCCGATGGCGCC
GCCCTGCCCTGCCATGCCGCGCGCATGCTGCCGGGCCTGACCCTGCCGAACGTGCGCACGCAATCGCTGCACGACATCTG
GTACCACAGCGAAGCCTTCCAGCGCTTTCGCGGCACCGCGTGGATGCCCGAGCCATGCCGCTCCTGCGACGAAAAAGAGC
GCGACCTGGGCGGCTGCCGCTGCCAGGCCTGGCTACTGACCGGCGATGCCGGGCGCACCGACCCGGTGTGCGACAAATCG
CCGGACCACGCCAGCGTGCATGCCGTGGTCATGCATGGCCGCCTGGCCGACCACCCCCTGGCCCCTCATCGACCCCTGGC
CCCGGTGCCTGAGGCGCCGCTGGTATTTCGCACGGACGCGGCGTCGCTGCGCTTGAGCGGGATGGCACGGTGA

Upstream 100 bases:

>100_bases
CAACATGCCGGCGAACGTGGCTGGATCGCCTGAGTCGGGCCCCGCCGCCCGGTCCTGCCCGCCCGCGGCGGCAGGCCCGC
CGCTGTGGCTGCTGGCCGAG

Downstream 100 bases:

>100_bases
CATCCGTGGTTGCGCGCAGCAAATCCAGCGTCAGGCCCTGGTGCTGATCCACGAGCGCCGCACCGGCGACGGCGTGCCAA
AAAGATTCGGAGCCGGCCGT

Product: pyrroloquinoline quinone biosynthesis protein PqqE

Products: NA

Alternate protein names: Pyrroloquinoline quinone biosynthesis protein E [H]

Number of amino acids: Translated: 370; Mature: 369

Protein sequence:

>370_residues
MTYRCPLHCAFCSNPVDYMRHRQELDSAQWRQVLSQARALGAAQLGLSGGEPLLRDDLEDLVGHARQLGFYTNLITSGVG
LTDARLGALRAAGLDHIQLSFQDSTRELNDFLSSTRTFDLKQRVARLIKAHGYPMVLNCVLHRHNLAHVGAIIEMALQMG
AEYLELANTQYYGWAWENRLGLMPTEEQLRTAEAVVATYRARIGKRCRILYVVPDYFEKRPKKCMNGWGSVFLGVAPDGA
ALPCHAARMLPGLTLPNVRTQSLHDIWYHSEAFQRFRGTAWMPEPCRSCDEKERDLGGCRCQAWLLTGDAGRTDPVCDKS
PDHASVHAVVMHGRLADHPLAPHRPLAPVPEAPLVFRTDAASLRLSGMAR

Sequences:

>Translated_370_residues
MTYRCPLHCAFCSNPVDYMRHRQELDSAQWRQVLSQARALGAAQLGLSGGEPLLRDDLEDLVGHARQLGFYTNLITSGVG
LTDARLGALRAAGLDHIQLSFQDSTRELNDFLSSTRTFDLKQRVARLIKAHGYPMVLNCVLHRHNLAHVGAIIEMALQMG
AEYLELANTQYYGWAWENRLGLMPTEEQLRTAEAVVATYRARIGKRCRILYVVPDYFEKRPKKCMNGWGSVFLGVAPDGA
ALPCHAARMLPGLTLPNVRTQSLHDIWYHSEAFQRFRGTAWMPEPCRSCDEKERDLGGCRCQAWLLTGDAGRTDPVCDKS
PDHASVHAVVMHGRLADHPLAPHRPLAPVPEAPLVFRTDAASLRLSGMAR
>Mature_369_residues
TYRCPLHCAFCSNPVDYMRHRQELDSAQWRQVLSQARALGAAQLGLSGGEPLLRDDLEDLVGHARQLGFYTNLITSGVGL
TDARLGALRAAGLDHIQLSFQDSTRELNDFLSSTRTFDLKQRVARLIKAHGYPMVLNCVLHRHNLAHVGAIIEMALQMGA
EYLELANTQYYGWAWENRLGLMPTEEQLRTAEAVVATYRARIGKRCRILYVVPDYFEKRPKKCMNGWGSVFLGVAPDGAA
LPCHAARMLPGLTLPNVRTQSLHDIWYHSEAFQRFRGTAWMPEPCRSCDEKERDLGGCRCQAWLLTGDAGRTDPVCDKSP
DHASVHAVVMHGRLADHPLAPHRPLAPVPEAPLVFRTDAASLRLSGMAR

Specific function: Unknown

COG id: COG0535

COG function: function code R; Predicted Fe-S oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the radical SAM superfamily. PqqE family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR006638
- InterPro:   IPR000385
- InterPro:   IPR017200
- InterPro:   IPR011843
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 41303; Mature: 41172

Theoretical pI: Translated: 8.18; Mature: 8.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTYRCPLHCAFCSNPVDYMRHRQELDSAQWRQVLSQARALGAAQLGLSGGEPLLRDDLED
CCEECCEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
LVGHARQLGFYTNLITSGVGLTDARLGALRAAGLDHIQLSFQDSTRELNDFLSSTRTFDL
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHCCHHH
KQRVARLIKAHGYPMVLNCVLHRHNLAHVGAIIEMALQMGAEYLELANTQYYGWAWENRL
HHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCHHHHHHCCCCEEEEEECCCC
GLMPTEEQLRTAEAVVATYRARIGKRCRILYVVPDYFEKRPKKCMNGWGSVFLGVAPDGA
CCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEEECCCCC
ALPCHAARMLPGLTLPNVRTQSLHDIWYHSEAFQRFRGTAWMPEPCRSCDEKERDLGGCR
CCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCHHHHCCCCCE
CQAWLLTGDAGRTDPVCDKSPDHASVHAVVMHGRLADHPLAPHRPLAPVPEAPLVFRTDA
EEEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEECCC
ASLRLSGMAR
CHHHHCCCCC
>Mature Secondary Structure 
TYRCPLHCAFCSNPVDYMRHRQELDSAQWRQVLSQARALGAAQLGLSGGEPLLRDDLED
CEECCEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
LVGHARQLGFYTNLITSGVGLTDARLGALRAAGLDHIQLSFQDSTRELNDFLSSTRTFDL
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHCCHHH
KQRVARLIKAHGYPMVLNCVLHRHNLAHVGAIIEMALQMGAEYLELANTQYYGWAWENRL
HHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCHHHHHHCCCCEEEEEECCCC
GLMPTEEQLRTAEAVVATYRARIGKRCRILYVVPDYFEKRPKKCMNGWGSVFLGVAPDGA
CCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEEECCCCC
ALPCHAARMLPGLTLPNVRTQSLHDIWYHSEAFQRFRGTAWMPEPCRSCDEKERDLGGCR
CCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCHHHHCCCCCE
CQAWLLTGDAGRTDPVCDKSPDHASVHAVVMHGRLADHPLAPHRPLAPVPEAPLVFRTDA
EEEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEECCC
ASLRLSGMAR
CHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA