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The map label for this gene is pqqD [H]

Identifier: 121610953

GI number: 121610953

Start: 4423600

End: 4423860

Strand: Direct

Name: pqqD [H]

Synonym: Veis_4037

Alternate gene names: 121610953

Gene position: 4423600-4423860 (Clockwise)

Preceding gene: 121610952

Following gene: 121610954

Centisome position: 79.46

GC content: 64.37

Gene sequence:

>261_bases
ATGAACCCCTGCGCCCGGCCGCAGCTCGACCCGCTGTACCGCCTGCAGTGGGAGCCGGCCCAGCAAGCCTGGGTGCTGCT
CTACCCCGAAGGCATGGTCAAGCTCAACGACAGCGCCGCCGCCATTTTGCAGCGCTGCGACGGCGCCCATACGCTGGATA
TGCTGATCGACGAACTGCAAACCACCTTTGGCGCGCAGGACCTGGCCAATGACATACACCGCTTTGTCCAACATGCCGGC
GAACGTGGCTGGATCGCCTGA

Upstream 100 bases:

>100_bases
TTCGCACGCCGGCCGAGCAGCAGCGCGCCACGCAAATCCTGCAGTTCAAGCTCGACATCCTGTGGTCGATGCTCGACGCG
ATCGAAAAGGCGTACCCCGA

Downstream 100 bases:

>100_bases
GTCGGGCCCCGCCGCCCGGTCCTGCCCGCCCGCGGCGGCAGGCCCGCCGCTGTGGCTGCTGGCCGAGTTGACCTACCGCT
GCCCGCTGCACTGCGCCTTC

Product: coenzyme PQQ synthesis D

Products: NA

Alternate protein names: Pyrroloquinoline quinone biosynthesis protein D [H]

Number of amino acids: Translated: 86; Mature: 86

Protein sequence:

>86_residues
MNPCARPQLDPLYRLQWEPAQQAWVLLYPEGMVKLNDSAAAILQRCDGAHTLDMLIDELQTTFGAQDLANDIHRFVQHAG
ERGWIA

Sequences:

>Translated_86_residues
MNPCARPQLDPLYRLQWEPAQQAWVLLYPEGMVKLNDSAAAILQRCDGAHTLDMLIDELQTTFGAQDLANDIHRFVQHAG
ERGWIA
>Mature_86_residues
MNPCARPQLDPLYRLQWEPAQQAWVLLYPEGMVKLNDSAAAILQRCDGAHTLDMLIDELQTTFGAQDLANDIHRFVQHAG
ERGWIA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pqqD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008792
- InterPro:   IPR022479 [H]

Pfam domain/function: PF05402 PqqD [H]

EC number: NA

Molecular weight: Translated: 9745; Mature: 9745

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPCARPQLDPLYRLQWEPAQQAWVLLYPEGMVKLNDSAAAILQRCDGAHTLDMLIDELQ
CCCCCCCCCCCCCEECCCCCCCEEEEECCCCCEEECCHHHHHHHHCCCCCHHHHHHHHHH
TTFGAQDLANDIHRFVQHAGERGWIA
HHCCHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MNPCARPQLDPLYRLQWEPAQQAWVLLYPEGMVKLNDSAAAILQRCDGAHTLDMLIDELQ
CCCCCCCCCCCCCEECCCCCCCEEEEECCCCCEEECCHHHHHHHHCCCCCHHHHHHHHHH
TTFGAQDLANDIHRFVQHAGERGWIA
HHCCHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA