Definition Verminephrobacter eiseniae EF01-2 chromosome, complete genome.
Accession NC_008786
Length 5,566,749

Click here to switch to the map view.

The map label for this gene is 121610589

Identifier: 121610589

GI number: 121610589

Start: 4051480

End: 4052454

Strand: Direct

Name: 121610589

Synonym: Veis_3662

Alternate gene names: NA

Gene position: 4051480-4052454 (Clockwise)

Preceding gene: 121610580

Following gene: 121610590

Centisome position: 72.78

GC content: 66.67

Gene sequence:

>975_bases
ATGACCGATAGCCAAGAACTCGATCTCCTGCCCGGCAACGTCAAGAAGGCCGTCGGCGGCGCCAGCTCCGGTGACCTGTG
GATGCTCCAGCGCAGCCTCATCCGCCGCCATCCCAAGCTCCAACCCCGCGACAACACCACCGAGCACTACAAGGAGCGCG
TGCGCCACTTGGCCGACCTGATGCACGCCAACGGCTACGACCGCTCGTTCCCCCTGAAGGTGTTCGCAGCCCGCGAGGAT
GGTCAAGACGTGCTGTACCTCGTGCAGGGCCACACCCGCCTGGATGCCTTCGACCTGGCTGTCTCCGAAGGCAAGGACAT
GGAGGTGATCCCGTGCGTCACCACCGATCGCGGCACCACGATGGAAGACCTGCTGGTCTCCACCATCACCGGCAACGAAG
GCGCGCCGCTCACCCCCATCGAGAAGGCCGGCATCGTGCGCGAACTGCAGGGGTGCAATGTCGGGCTGGGCTCGATCGCC
CGCCGCCTGGGCTATACGCTGGCCTACGTCAAAAGCCTGCTGTCCATCCTCGAAGCGCCGCGCGAGGTGCGCGAAATGGT
GCAGGAGGGCAAAGTCGCCGCTTCAGTGGCCGTCGGGACCGTCAAGGAACACGGCAAGCAGGCCGGCGCAGTGCTCAAGG
CGGGCCTGGAGGTCGCCAAGGCCAAGGGCAAGGACAAGGTGACGCCCAAGCATCTGCGCGCTGCTGCGAGTCGGGGCAGC
AAGCCCGAGGCCAAGAGCACCTTCGCTGCTGCCGCGCCCGCTCAAACGCACAAACCCGAGGCCAAGGCCGTGTCCCTGTC
CTTGGCAACTGCCGTAGATGACGCCACCATGGCAGCCATGCGGCGGGCAGCCAAGTGGATCGCGCAAGAGACCGGGCCGG
CCGACGAATACCCGTTCCTGGCACTGGTGAGCACCACGCTGGGCCTGGGTGGCACCGCAGCGCTCCAGGGTCTGGTCAAC
AAGGCGCGGGGCTGA

Upstream 100 bases:

>100_bases
CGAGCGCGCCGACTCGAATTTGATTTCTCTTTTTCGTCCGGCATTCTGCACTTACCTGCGCCGCAGAGGTAATTGCGGTG
CCACTGAACGGACGAAACCC

Downstream 100 bases:

>100_bases
CCCACCATCACCGGCCGGGCTCATGTCCGGCTTTTTTTTTGCAGATCATCTTCGGAAAAGACATTGCCAGTGTCATTGTC
AATCAGGAGCAATACCATGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 324; Mature: 323

Protein sequence:

>324_residues
MTDSQELDLLPGNVKKAVGGASSGDLWMLQRSLIRRHPKLQPRDNTTEHYKERVRHLADLMHANGYDRSFPLKVFAARED
GQDVLYLVQGHTRLDAFDLAVSEGKDMEVIPCVTTDRGTTMEDLLVSTITGNEGAPLTPIEKAGIVRELQGCNVGLGSIA
RRLGYTLAYVKSLLSILEAPREVREMVQEGKVAASVAVGTVKEHGKQAGAVLKAGLEVAKAKGKDKVTPKHLRAAASRGS
KPEAKSTFAAAAPAQTHKPEAKAVSLSLATAVDDATMAAMRRAAKWIAQETGPADEYPFLALVSTTLGLGGTAALQGLVN
KARG

Sequences:

>Translated_324_residues
MTDSQELDLLPGNVKKAVGGASSGDLWMLQRSLIRRHPKLQPRDNTTEHYKERVRHLADLMHANGYDRSFPLKVFAARED
GQDVLYLVQGHTRLDAFDLAVSEGKDMEVIPCVTTDRGTTMEDLLVSTITGNEGAPLTPIEKAGIVRELQGCNVGLGSIA
RRLGYTLAYVKSLLSILEAPREVREMVQEGKVAASVAVGTVKEHGKQAGAVLKAGLEVAKAKGKDKVTPKHLRAAASRGS
KPEAKSTFAAAAPAQTHKPEAKAVSLSLATAVDDATMAAMRRAAKWIAQETGPADEYPFLALVSTTLGLGGTAALQGLVN
KARG
>Mature_323_residues
TDSQELDLLPGNVKKAVGGASSGDLWMLQRSLIRRHPKLQPRDNTTEHYKERVRHLADLMHANGYDRSFPLKVFAAREDG
QDVLYLVQGHTRLDAFDLAVSEGKDMEVIPCVTTDRGTTMEDLLVSTITGNEGAPLTPIEKAGIVRELQGCNVGLGSIAR
RLGYTLAYVKSLLSILEAPREVREMVQEGKVAASVAVGTVKEHGKQAGAVLKAGLEVAKAKGKDKVTPKHLRAAASRGSK
PEAKSTFAAAAPAQTHKPEAKAVSLSLATAVDDATMAAMRRAAKWIAQETGPADEYPFLALVSTTLGLGGTAALQGLVNK
ARG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34524; Mature: 34393

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDSQELDLLPGNVKKAVGGASSGDLWMLQRSLIRRHPKLQPRDNTTEHYKERVRHLADL
CCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH
MHANGYDRSFPLKVFAAREDGQDVLYLVQGHTRLDAFDLAVSEGKDMEVIPCVTTDRGTT
HHCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCHHHHHHHCCCCCCEEEEEEECCCCCC
MEDLLVSTITGNEGAPLTPIEKAGIVRELQGCNVGLGSIARRLGYTLAYVKSLLSILEAP
HHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
REVREMVQEGKVAASVAVGTVKEHGKQAGAVLKAGLEVAKAKGKDKVTPKHLRAAASRGS
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCC
KPEAKSTFAAAAPAQTHKPEAKAVSLSLATAVDDATMAAMRRAAKWIAQETGPADEYPFL
CCCHHHHHHHCCCCCCCCCCHHHEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH
ALVSTTLGLGGTAALQGLVNKARG
HHHHHHHCCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
TDSQELDLLPGNVKKAVGGASSGDLWMLQRSLIRRHPKLQPRDNTTEHYKERVRHLADL
CCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH
MHANGYDRSFPLKVFAAREDGQDVLYLVQGHTRLDAFDLAVSEGKDMEVIPCVTTDRGTT
HHCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCHHHHHHHCCCCCCEEEEEEECCCCCC
MEDLLVSTITGNEGAPLTPIEKAGIVRELQGCNVGLGSIARRLGYTLAYVKSLLSILEAP
HHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
REVREMVQEGKVAASVAVGTVKEHGKQAGAVLKAGLEVAKAKGKDKVTPKHLRAAASRGS
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCC
KPEAKSTFAAAAPAQTHKPEAKAVSLSLATAVDDATMAAMRRAAKWIAQETGPADEYPFL
CCCHHHHHHHCCCCCCCCCCHHHEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH
ALVSTTLGLGGTAALQGLVNKARG
HHHHHHHCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA