| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is 121610590
Identifier: 121610590
GI number: 121610590
Start: 4052518
End: 4052844
Strand: Direct
Name: 121610590
Synonym: Veis_3663
Alternate gene names: NA
Gene position: 4052518-4052844 (Clockwise)
Preceding gene: 121610589
Following gene: 121610593
Centisome position: 72.8
GC content: 50.15
Gene sequence:
>327_bases TTGCCAGTGTCATTGTCAATCAGGAGCAATACCATGAATGAAGCCGAGAAAGGGGAATTGCTCCTTGGCCCTTTGAACAT TGCCCAAGGCGACACCGGGCAATCCAGAGTGGTCGCCGGATTCTTGCTCGGTTTATATAACGGATGCCGCTTTCCGTTTG ATATCACTGAATTTCGGCGGCTTGACCGAAGATTGTTTGAAGACTGTCTGGCGATTCTCAACATGGGCCAGTGGCTGGGC GACAATCATGACAGCACCATCTACGACTTCATTCACCTGAATACGCACGAGAAAGTGAATCATGATCTGCGCAACCTGCA ACGGTGA
Upstream 100 bases:
>100_bases AGCGCTCCAGGGTCTGGTCAACAAGGCGCGGGGCTGACCCACCATCACCGGCCGGGCTCATGTCCGGCTTTTTTTTTGCA GATCATCTTCGGAAAAGACA
Downstream 100 bases:
>100_bases AGTTGTCTGGAAAGGGCCGTTCTTCAAACCGACGCATACCGGGTGCATGAACTGCGGCGCCAGAAACAACCATGTTTGGC CAACGCACATTGACGAAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 108; Mature: 107
Protein sequence:
>108_residues MPVSLSIRSNTMNEAEKGELLLGPLNIAQGDTGQSRVVAGFLLGLYNGCRFPFDITEFRRLDRRLFEDCLAILNMGQWLG DNHDSTIYDFIHLNTHEKVNHDLRNLQR
Sequences:
>Translated_108_residues MPVSLSIRSNTMNEAEKGELLLGPLNIAQGDTGQSRVVAGFLLGLYNGCRFPFDITEFRRLDRRLFEDCLAILNMGQWLG DNHDSTIYDFIHLNTHEKVNHDLRNLQR >Mature_107_residues PVSLSIRSNTMNEAEKGELLLGPLNIAQGDTGQSRVVAGFLLGLYNGCRFPFDITEFRRLDRRLFEDCLAILNMGQWLGD NHDSTIYDFIHLNTHEKVNHDLRNLQR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12375; Mature: 12244
Theoretical pI: Translated: 6.08; Mature: 6.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVSLSIRSNTMNEAEKGELLLGPLNIAQGDTGQSRVVAGFLLGLYNGCRFPFDITEFRR CCEEEEECCCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHH LDRRLFEDCLAILNMGQWLGDNHDSTIYDFIHLNTHEKVNHDLRNLQR HHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHCCC >Mature Secondary Structure PVSLSIRSNTMNEAEKGELLLGPLNIAQGDTGQSRVVAGFLLGLYNGCRFPFDITEFRR CEEEEECCCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHH LDRRLFEDCLAILNMGQWLGDNHDSTIYDFIHLNTHEKVNHDLRNLQR HHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA