| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is ves [H]
Identifier: 121610574
GI number: 121610574
Start: 4033016
End: 4033717
Strand: Direct
Name: ves [H]
Synonym: Veis_3647
Alternate gene names: 121610574
Gene position: 4033016-4033717 (Clockwise)
Preceding gene: 121610573
Following gene: 121610575
Centisome position: 72.45
GC content: 69.94
Gene sequence:
>702_bases ATGAGTCACCCCATGATGGCGTTTTTTGACCTGGCCACCACCCCCGGCCAGCCTTGGAAGAACGGCGCTGGCAGCACGCA GGAGTTGGCCTGCTGGCCGCCCGGTGCGGGCATGGACCACTTCGCCTGGCGCCTGAGCGTGGCCACCATTGCCCGGTCCG GGCCGTTCTCGGTGTTCCCCGGGGTACAGCGGCAGATCATGCTGCTCGGCGGTGACGGCGTGCACCTGCGCCATGCCCGG GGGCGCTGGGAGCACCTGCTCGATCAGCGCTGGCAGCCCTTTGCTTTCGACGGCGATGAGCCGCTCGAATGCCGCCTCGC CGGCGGCCCATCGACCGCCCTGAACCTGATGCTGCGCCATGGCCTGTGCAGTGGCACGCTGCAAGTGCTGCACGCTGCGC CAGCGCCCGAAACGCCGGCTGCGGGCCTGTGCATGGTGCTGCAAGGTCTGTGGCAATGGCGCGGCAGCAGCAGCAGCAGC GGTGACGGGGACACCGCACGCGCGCTGAAGGCCGGGCAGGGTTTTGGGTGGATGGACCAGCGCATCGAGTCACCGGGCCT TGCCAGCGCTGCGCAGCATGCCGGTGCAGCACTGGCCTGGGTGGCGCTCACTGGGGTACCTTCGCCTGCGGCTGCGGTAC GAGCGCCTTCGGACGGCCGTGCGGCGCTCGTGTGCCGCCCCGGCGCCGGGGAAAAAACATGA
Upstream 100 bases:
>100_bases ATCGGCCGCACTCCCTTCATCCCGCCCCCCTGCCCTCCTGCCCCCGGCACGAGACGATTTGCTGCGCGCAGGCAACGATG CCGGCCAGCCGCACTGATCC
Downstream 100 bases:
>100_bases ACCCCGTCGGCCACGGGCGCAGGCTTCACATTTGCTTGCAGCCATTATTTTTGTAGCGATGACAGGCACGCCCCGCCATG ACGATGCACGACACCCCGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 233; Mature: 232
Protein sequence:
>233_residues MSHPMMAFFDLATTPGQPWKNGAGSTQELACWPPGAGMDHFAWRLSVATIARSGPFSVFPGVQRQIMLLGGDGVHLRHAR GRWEHLLDQRWQPFAFDGDEPLECRLAGGPSTALNLMLRHGLCSGTLQVLHAAPAPETPAAGLCMVLQGLWQWRGSSSSS GDGDTARALKAGQGFGWMDQRIESPGLASAAQHAGAALAWVALTGVPSPAAAVRAPSDGRAALVCRPGAGEKT
Sequences:
>Translated_233_residues MSHPMMAFFDLATTPGQPWKNGAGSTQELACWPPGAGMDHFAWRLSVATIARSGPFSVFPGVQRQIMLLGGDGVHLRHAR GRWEHLLDQRWQPFAFDGDEPLECRLAGGPSTALNLMLRHGLCSGTLQVLHAAPAPETPAAGLCMVLQGLWQWRGSSSSS GDGDTARALKAGQGFGWMDQRIESPGLASAAQHAGAALAWVALTGVPSPAAAVRAPSDGRAALVCRPGAGEKT >Mature_232_residues SHPMMAFFDLATTPGQPWKNGAGSTQELACWPPGAGMDHFAWRLSVATIARSGPFSVFPGVQRQIMLLGGDGVHLRHARG RWEHLLDQRWQPFAFDGDEPLECRLAGGPSTALNLMLRHGLCSGTLQVLHAAPAPETPAAGLCMVLQGLWQWRGSSSSSG DGDTARALKAGQGFGWMDQRIESPGLASAAQHAGAALAWVALTGVPSPAAAVRAPSDGRAALVCRPGAGEKT
Specific function: Unknown
COG id: COG3758
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ves family [H]
Homologues:
Organism=Escherichia coli, GI87081963, Length=198, Percent_Identity=31.8181818181818, Blast_Score=96, Evalue=2e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011051 - InterPro: IPR010282 [H]
Pfam domain/function: PF05962 HutD [H]
EC number: NA
Molecular weight: Translated: 24480; Mature: 24349
Theoretical pI: Translated: 7.95; Mature: 7.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHPMMAFFDLATTPGQPWKNGAGSTQELACWPPGAGMDHFAWRLSVATIARSGPFSVFP CCCCCEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCC GVQRQIMLLGGDGVHLRHARGRWEHLLDQRWQPFAFDGDEPLECRLAGGPSTALNLMLRH CCCEEEEEECCCCEEEECCCCHHHHHHHCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHH GLCSGTLQVLHAAPAPETPAAGLCMVLQGLWQWRGSSSSSGDGDTARALKAGQGFGWMDQ CCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCHHHH RIESPGLASAAQHAGAALAWVALTGVPSPAAAVRAPSDGRAALVCRPGAGEKT HHCCCCCHHHHHHCCCEEEEEEEECCCCCHHHEECCCCCCEEEEECCCCCCCC >Mature Secondary Structure SHPMMAFFDLATTPGQPWKNGAGSTQELACWPPGAGMDHFAWRLSVATIARSGPFSVFP CCCCEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCC GVQRQIMLLGGDGVHLRHARGRWEHLLDQRWQPFAFDGDEPLECRLAGGPSTALNLMLRH CCCEEEEEECCCCEEEECCCCHHHHHHHCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHH GLCSGTLQVLHAAPAPETPAAGLCMVLQGLWQWRGSSSSSGDGDTARALKAGQGFGWMDQ CCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCHHHH RIESPGLASAAQHAGAALAWVALTGVPSPAAAVRAPSDGRAALVCRPGAGEKT HHCCCCCHHHHHHCCCEEEEEEEECCCCCHHHEECCCCCCEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA