| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is hutU [H]
Identifier: 121610573
GI number: 121610573
Start: 4031129
End: 4032850
Strand: Direct
Name: hutU [H]
Synonym: Veis_3646
Alternate gene names: 121610573
Gene position: 4031129-4032850 (Clockwise)
Preceding gene: 121610572
Following gene: 121610574
Centisome position: 72.41
GC content: 68.7
Gene sequence:
>1722_bases ATGACCGCCAATGACCCCCGCCACGACGCCACGCGCGTGATCCGCGCCCCGCGCGGCAGCCAGCTCAGTTGCAAGAGCTG GCTCACCGAAGCGGCCTACCGCATGCTCCAGAACAACCTGGACGCCGAAGTGGCCGAGCGCCCGCAAGACCTGGTGGTGT ACGGCGGCATCGGCCGCGCCGCGCGCAACTGGCAGTGCTATGACCAAATCCTGGCCACGCTCAGGGAACTGAACGACGAC GAGACCCTGCTGGTGCAGTCCGGCAAACCGGTGGGCGTTTTCCAGACCCATGCCGACGCGCCGCGCGTGCTGCTGGCCAA TTCCAACCTGGTGCCCCGGTGGGCGAATTGGGAGCATTTCAGCGCGCTCGACCAAAAGGGCTTGTTCATGTACGGCCAGA TGACGGCGGGCAGTTGGATCTACATCGGCAGCCAAGGCATCGTGCAAGGCACCTACGAGACCTTTGCCGCCGCCGGACGC CAGCATTACGGCGGCTCGCTGGCAGGCCGGTGGATTTTGAGCGCCGGGCTGGGCGGCATGGGCGGCGCGCAGCCGCTGGC CGCCAGCTTTGCCGGCGCAGTGTCGCTGACCATCGAATGCCGGCAAAGCAGCATCGACGCCCGGCTGCGCACCGGCTATC TGGACCGGCAGGCGCGCGATATCGACCACGCCATCGAATGCCTGCGCCAGCACCTGGCGGCCCAAGAGGCGGTGTCGATC GCACTGCTGGGCAACGCCGCCGAGCTGCTGCCCGAACTGCTGCGGCGGGCGCAGGCCGGGGGCCTGAAGCCCGATCTGGT CACCGACCAGACCTCGGCGCACGACCTGGTCAACGGCTACCTGCCCGGCGGCTGGACGCTGGCGCAGTGGCACGCCGCAC AGCAGGATGCGGGCCGGCATGCGCAGCTCAGACAGGCAGCGGCGCGCTCGTGCGCCGTCCATGTGCAGGCCATGCTGGAC TTTCAGGCCATGGGCATTCCGGTCGTCGACTATGGCAACAACATCCGCCAGGTGGCGTTCGATGAGGGCGTGAAAAATGC GTTCGACATCCCCGGCTTCGTGCCGGCCTATATCCGCCCGCTGTTTTGCGCAGGCAAAGGGCCGTTTCGCTGGGTGGCGC TGTCGGGCGACCCGCAGGACATCGACAAGACCGACGCCAGGATCAAGGCCCTGTTCCCGGAAAACCGGCATCTGCACCGC TGGCTGGACATGGCGCGCGCACGCATCCGCTTTCAGGGCCTGCCCGCGCGCATCTGCTGGCTGGGCCTGGGCGAGCGCCA CATCGCCGGCCTGGCCTTCAACGCCATGGTCAAGAGCGGCGAACTCAAGGCACCGATCGTCATTGGCCGCGACCACCTGG ACACCGGCTCCGTGGCCAGCCCGAACCGCGAGACCGAGGGCATGCTCGACGGCACCGATGCCGTGAGCGACTGGCCGCTG CTCAACGCGCTGCTGAACACCGCCGGTGGCGCCACCTGGGTCAGCCTGCACCATGGCGGCGGCGTCGGCATGGGCTACTC GCAGCACGCCGGCATGGTCATCGTGGCCGACGGCAGCGATGCCGCAGCCAGGCGCCTGGCGCGCGTGCTGGTCAACGACA GCGGCAGCGGCGTGATGCGCCATGCCGATGCCGGCTACGCGCTGGCGCTGCAAACGGCCAACGAGCAAGGGCTGCAACTG CCGATGGCCCGTTCGGCCTGCGCCGACGGCGCAGCACGATGA
Upstream 100 bases:
>100_bases CCCGCGCCGCTGTTGCAGTGCCTGCCCAGCCATGCCTGAGCCTTGCATCGGCCACCTGCGCCCAATGAGACCCGCCACCA GCCCCCCCATGAGGCCCGCC
Downstream 100 bases:
>100_bases GAAACCGGTTTCCCCACCCCGCCCAAGAACCCCCGCCCATGAACCCGCCCCGCCTGGCGCCCGCCATCGGCCGCACTCCC TTCATCCCGCCCCCCTGCCC
Product: urocanate hydratase
Products: NA
Alternate protein names: Urocanase; Imidazolonepropionate hydrolase [H]
Number of amino acids: Translated: 573; Mature: 572
Protein sequence:
>573_residues MTANDPRHDATRVIRAPRGSQLSCKSWLTEAAYRMLQNNLDAEVAERPQDLVVYGGIGRAARNWQCYDQILATLRELNDD ETLLVQSGKPVGVFQTHADAPRVLLANSNLVPRWANWEHFSALDQKGLFMYGQMTAGSWIYIGSQGIVQGTYETFAAAGR QHYGGSLAGRWILSAGLGGMGGAQPLAASFAGAVSLTIECRQSSIDARLRTGYLDRQARDIDHAIECLRQHLAAQEAVSI ALLGNAAELLPELLRRAQAGGLKPDLVTDQTSAHDLVNGYLPGGWTLAQWHAAQQDAGRHAQLRQAAARSCAVHVQAMLD FQAMGIPVVDYGNNIRQVAFDEGVKNAFDIPGFVPAYIRPLFCAGKGPFRWVALSGDPQDIDKTDARIKALFPENRHLHR WLDMARARIRFQGLPARICWLGLGERHIAGLAFNAMVKSGELKAPIVIGRDHLDTGSVASPNRETEGMLDGTDAVSDWPL LNALLNTAGGATWVSLHHGGGVGMGYSQHAGMVIVADGSDAAARRLARVLVNDSGSGVMRHADAGYALALQTANEQGLQL PMARSACADGAAR
Sequences:
>Translated_573_residues MTANDPRHDATRVIRAPRGSQLSCKSWLTEAAYRMLQNNLDAEVAERPQDLVVYGGIGRAARNWQCYDQILATLRELNDD ETLLVQSGKPVGVFQTHADAPRVLLANSNLVPRWANWEHFSALDQKGLFMYGQMTAGSWIYIGSQGIVQGTYETFAAAGR QHYGGSLAGRWILSAGLGGMGGAQPLAASFAGAVSLTIECRQSSIDARLRTGYLDRQARDIDHAIECLRQHLAAQEAVSI ALLGNAAELLPELLRRAQAGGLKPDLVTDQTSAHDLVNGYLPGGWTLAQWHAAQQDAGRHAQLRQAAARSCAVHVQAMLD FQAMGIPVVDYGNNIRQVAFDEGVKNAFDIPGFVPAYIRPLFCAGKGPFRWVALSGDPQDIDKTDARIKALFPENRHLHR WLDMARARIRFQGLPARICWLGLGERHIAGLAFNAMVKSGELKAPIVIGRDHLDTGSVASPNRETEGMLDGTDAVSDWPL LNALLNTAGGATWVSLHHGGGVGMGYSQHAGMVIVADGSDAAARRLARVLVNDSGSGVMRHADAGYALALQTANEQGLQL PMARSACADGAAR >Mature_572_residues TANDPRHDATRVIRAPRGSQLSCKSWLTEAAYRMLQNNLDAEVAERPQDLVVYGGIGRAARNWQCYDQILATLRELNDDE TLLVQSGKPVGVFQTHADAPRVLLANSNLVPRWANWEHFSALDQKGLFMYGQMTAGSWIYIGSQGIVQGTYETFAAAGRQ HYGGSLAGRWILSAGLGGMGGAQPLAASFAGAVSLTIECRQSSIDARLRTGYLDRQARDIDHAIECLRQHLAAQEAVSIA LLGNAAELLPELLRRAQAGGLKPDLVTDQTSAHDLVNGYLPGGWTLAQWHAAQQDAGRHAQLRQAAARSCAVHVQAMLDF QAMGIPVVDYGNNIRQVAFDEGVKNAFDIPGFVPAYIRPLFCAGKGPFRWVALSGDPQDIDKTDARIKALFPENRHLHRW LDMARARIRFQGLPARICWLGLGERHIAGLAFNAMVKSGELKAPIVIGRDHLDTGSVASPNRETEGMLDGTDAVSDWPLL NALLNTAGGATWVSLHHGGGVGMGYSQHAGMVIVADGSDAAARRLARVLVNDSGSGVMRHADAGYALALQTANEQGLQLP MARSACADGAAR
Specific function: Unknown
COG id: COG2987
COG function: function code E; Urocanate hydratase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the urocanase family [H]
Homologues:
Organism=Homo sapiens, GI21389467, Length=571, Percent_Identity=33.4500875656743, Blast_Score=279, Evalue=6e-75, Organism=Homo sapiens, GI260306182, Length=631, Percent_Identity=31.2202852614897, Blast_Score=253, Evalue=4e-67, Organism=Caenorhabditis elegans, GI71997891, Length=585, Percent_Identity=34.5299145299145, Blast_Score=307, Evalue=1e-83,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000193 [H]
Pfam domain/function: PF01175 Urocanase [H]
EC number: =4.2.1.49 [H]
Molecular weight: Translated: 61725; Mature: 61593
Theoretical pI: Translated: 7.29; Mature: 7.29
Prosite motif: PS01233 UROCANASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTANDPRHDATRVIRAPRGSQLSCKSWLTEAAYRMLQNNLDAEVAERPQDLVVYGGIGRA CCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHCCCCCEEEECCCCCC ARNWQCYDQILATLRELNDDETLLVQSGKPVGVFQTHADAPRVLLANSNLVPRWANWEHF CCCCHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEECCCCCEEEEECCCCCCCCCCCHHH SALDQKGLFMYGQMTAGSWIYIGSQGIVQGTYETFAAAGRQHYGGSLAGRWILSAGLGGM HHHCCCCEEEEEEECCCCEEEECCCCCEECHHHHHHHCCCHHCCCCHHHHHHHHCCCCCC GGAQPLAASFAGAVSLTIECRQSSIDARLRTGYLDRQARDIDHAIECLRQHLAAQEAVSI CCCCHHHHHHCCEEEEEEEECCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHEEE ALLGNAAELLPELLRRAQAGGLKPDLVTDQTSAHDLVNGYLPGGWTLAQWHAAQQDAGRH EEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHCCCHH AQLRQAAARSCAVHVQAMLDFQAMGIPVVDYGNNIRQVAFDEGVKNAFDIPGFVPAYIRP HHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEHHHHHCCCHHCCCCCCCHHHHHH LFCAGKGPFRWVALSGDPQDIDKTDARIKALFPENRHLHRWLDMARARIRFQGLPARICW HHCCCCCCEEEEEECCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHEECCCCEEEEE LGLGERHIAGLAFNAMVKSGELKAPIVIGRDHLDTGSVASPNRETEGMLDGTDAVSDWPL ECCCCHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH LNALLNTAGGATWVSLHHGGGVGMGYSQHAGMVIVADGSDAAARRLARVLVNDSGSGVMR HHHHHHCCCCEEEEEEECCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCCEEE HADAGYALALQTANEQGLQLPMARSACADGAAR ECCCCEEEEEEECCCCCCCCCCHHHHCCCCCCC >Mature Secondary Structure TANDPRHDATRVIRAPRGSQLSCKSWLTEAAYRMLQNNLDAEVAERPQDLVVYGGIGRA CCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHCCCCCEEEECCCCCC ARNWQCYDQILATLRELNDDETLLVQSGKPVGVFQTHADAPRVLLANSNLVPRWANWEHF CCCCHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEECCCCCEEEEECCCCCCCCCCCHHH SALDQKGLFMYGQMTAGSWIYIGSQGIVQGTYETFAAAGRQHYGGSLAGRWILSAGLGGM HHHCCCCEEEEEEECCCCEEEECCCCCEECHHHHHHHCCCHHCCCCHHHHHHHHCCCCCC GGAQPLAASFAGAVSLTIECRQSSIDARLRTGYLDRQARDIDHAIECLRQHLAAQEAVSI CCCCHHHHHHCCEEEEEEEECCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHEEE ALLGNAAELLPELLRRAQAGGLKPDLVTDQTSAHDLVNGYLPGGWTLAQWHAAQQDAGRH EEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHCCCHH AQLRQAAARSCAVHVQAMLDFQAMGIPVVDYGNNIRQVAFDEGVKNAFDIPGFVPAYIRP HHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEHHHHHCCCHHCCCCCCCHHHHHH LFCAGKGPFRWVALSGDPQDIDKTDARIKALFPENRHLHRWLDMARARIRFQGLPARICW HHCCCCCCEEEEEECCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHEECCCCEEEEE LGLGERHIAGLAFNAMVKSGELKAPIVIGRDHLDTGSVASPNRETEGMLDGTDAVSDWPL ECCCCHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH LNALLNTAGGATWVSLHHGGGVGMGYSQHAGMVIVADGSDAAARRLARVLVNDSGSGVMR HHHHHHCCCCEEEEEEECCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCCEEE HADAGYALALQTANEQGLQLPMARSACADGAAR ECCCCEEEEEEECCCCCCCCCCHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11823852 [H]