| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is 121610402
Identifier: 121610402
GI number: 121610402
Start: 3841239
End: 3841589
Strand: Direct
Name: 121610402
Synonym: Veis_3470
Alternate gene names: NA
Gene position: 3841239-3841589 (Clockwise)
Preceding gene: 121610398
Following gene: 121610403
Centisome position: 69.0
GC content: 51.0
Gene sequence:
>351_bases ATGCTTAGCCCAACTCCTCCTATCCTCCTTGTTTTCTTTTTCAAATACGAGTCGGGCAATGAGCCAGTGCGAGACTGGCT GAAAAATTTGCCAGCCATCGAGCGGAAGGCTATCGGCGAAGATATCAAAACCGTGCAATTCGGCTGGCCATTGGGAATGC CTTTGGTGCGCAAAATGGGCAAGGATCTTTGGGAAGTGCGTATCCACCTTCAGACTCGAATTGCCCGTGTTTTATTCACC GTCAACGGGAACACCATGGTGCTGCTCCATGGGTTCATCAAAAAATCCAGCAGCACCCCGGCGGATGACCTCGCGCTCGC GAAAAACCGACTAAAACAAGTCAAGGAGTGA
Upstream 100 bases:
>100_bases TCGCATTCGATCCGGCCAGCTTGCATTGCATCACCGCCAGCTCACATTATTTGCAAATCACCCACTTGCACAATCGTACC AATGTTGGTACGATTGCATC
Downstream 100 bases:
>100_bases AGACCATGGAAAACAAACACATCGGCAGCAATTTCGACGATTTTCTGGCCGAGGAAGCTTTATTGGAAGACGCGATGGCG ACGGCTATGAAGCGGGTCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 116; Mature: 116
Protein sequence:
>116_residues MLSPTPPILLVFFFKYESGNEPVRDWLKNLPAIERKAIGEDIKTVQFGWPLGMPLVRKMGKDLWEVRIHLQTRIARVLFT VNGNTMVLLHGFIKKSSSTPADDLALAKNRLKQVKE
Sequences:
>Translated_116_residues MLSPTPPILLVFFFKYESGNEPVRDWLKNLPAIERKAIGEDIKTVQFGWPLGMPLVRKMGKDLWEVRIHLQTRIARVLFT VNGNTMVLLHGFIKKSSSTPADDLALAKNRLKQVKE >Mature_116_residues MLSPTPPILLVFFFKYESGNEPVRDWLKNLPAIERKAIGEDIKTVQFGWPLGMPLVRKMGKDLWEVRIHLQTRIARVLFT VNGNTMVLLHGFIKKSSSTPADDLALAKNRLKQVKE
Specific function: Unknown
COG id: COG4679
COG function: function code S; Phage-related protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13257; Mature: 13257
Theoretical pI: Translated: 10.73; Mature: 10.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSPTPPILLVFFFKYESGNEPVRDWLKNLPAIERKAIGEDIKTVQFGWPLGMPLVRKMG CCCCCCCEEEEEEEECCCCCCHHHHHHHCCCHHHHHHHCCCCCEEECCCCCCCHHHHHHH KDLWEVRIHLQTRIARVLFTVNGNTMVLLHGFIKKSSSTPADDLALAKNRLKQVKE HHHHHHHHHHHHHHHHHHEEECCCEEEEEEEHHHCCCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MLSPTPPILLVFFFKYESGNEPVRDWLKNLPAIERKAIGEDIKTVQFGWPLGMPLVRKMG CCCCCCCEEEEEEEECCCCCCHHHHHHHCCCHHHHHHHCCCCCEEECCCCCCCHHHHHHH KDLWEVRIHLQTRIARVLFTVNGNTMVLLHGFIKKSSSTPADDLALAKNRLKQVKE HHHHHHHHHHHHHHHHHHEEECCCEEEEEEEHHHCCCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA